RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 FAM74A1Q5RGS3 127 aa2.83□□□□□ -1.96
SMCO3-201ENST00000316048 TEX36Q5VZQ5 186 aa2.83□□□□□ -1.96
SMCO3-201ENST00000316048 STUMQ69YW2 141 aa2.83□□□□□ -1.96
SMCO3-201ENST00000316048 RPL7L1Q6DKI1 246 aaKnown RBP2.83□□□□□ -1.96
SMCO3-201ENST00000316048 LCN12Q6JVE5 192 aa2.83□□□□□ -1.96
SMCO3-201ENST00000316048 Q6ZR54 194 aa2.83□□□□□ -1.96
SMCO3-201ENST00000316048 PNKDQ8N490 385 aa2.83□□□□□ -1.96
SMCO3-201ENST00000316048 EIF4E3Q8N5X7 224 aaKnown RBP2.83□□□□□ -1.96
SMCO3-201ENST00000316048 C20orf203Q8NBC4 194 aa2.83□□□□□ -1.96
SMCO3-201ENST00000316048 DEFB108BQ8NET1 73 aa2.83□□□□□ -1.96
SMCO3-201ENST00000316048 CA5BP1Q8WTZ4 195 aa2.83□□□□□ -1.96
SMCO3-201ENST00000316048 GPR146Q96CH1 333 aa2.83□□□□□ -1.96
SMCO3-201ENST00000316048 CCL13Q99616 98 aa2.83□□□□□ -1.96
SMCO3-201ENST00000316048 SMIM3Q9BZL3 60 aa2.83□□□□□ -1.96
SMCO3-201ENST00000316048 DYNLRB1Q9NP97 96 aa2.83□□□□□ -1.96
SMCO3-201ENST00000316048 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.83□□□□□ -1.96
SMCO3-201ENST00000316048 LYRM2Q9NU23 88 aaPredicted RBP2.83□□□□□ -1.96
SMCO3-201ENST00000316048 COA4Q9NYJ1 87 aa2.83□□□□□ -1.96
SMCO3-201ENST00000316048 CACFD1Q9UGQ2 172 aa2.83□□□□□ -1.96
SMCO3-201ENST00000316048 PSG11Q9UQ72 335 aa2.83□□□□□ -1.96
SMCO3-201ENST00000316048 CNOT1A5YKK6 2376 aaKnown RBP2.83□□□□□ -1.96
SMCO3-201ENST00000316048 A0A0C4DFX4 3053 aa2.83□□□□□ -1.96
SMCO3-201ENST00000316048 INTS1Q8N201 2190 aaKnown RBP2.83□□□□□ -1.96
SMCO3-201ENST00000316048 CFAP54Q96N23 3096 aa2.83□□□□□ -1.96
SMCO3-201ENST00000316048 IGHV3-43A0A0B4J1X8 118 aa2.83□□□□□ -1.96
SMCO3-201ENST00000316048 KBTBD11-OT1A0A1B0GTJ5 212 aa2.83□□□□□ -1.96
SMCO3-201ENST00000316048 FAM24AA6NFZ4 105 aa2.83□□□□□ -1.96
SMCO3-201ENST00000316048 DEFB108AA8MXU0 73 aa2.83□□□□□ -1.96
SMCO3-201ENST00000316048 E7EQL1 145 aa2.83□□□□□ -1.96
SMCO3-201ENST00000316048 F6UB75 175 aa2.83□□□□□ -1.96
SMCO3-201ENST00000316048 NDUFB3O43676 98 aa2.83□□□□□ -1.96
SMCO3-201ENST00000316048 SYNGR2O43760 224 aa2.83□□□□□ -1.96
SMCO3-201ENST00000316048 MMP23AO75900 390 aa2.83□□□□□ -1.96
SMCO3-201ENST00000316048 HPRT1P00492 218 aa2.83□□□□□ -1.96
SMCO3-201ENST00000316048 KRASP01116 189 aa2.83□□□□□ -1.96
SMCO3-201ENST00000316048 GYPAP02724 150 aa2.83□□□□□ -1.96
SMCO3-201ENST00000316048 CHTF8P0CG12 524 aa2.83□□□□□ -1.96
SMCO3-201ENST00000316048 IGHV3-43DP0DP04 118 aa2.83□□□□□ -1.96
SMCO3-201ENST00000316048 RAB4AP20338 218 aa2.83□□□□□ -1.96
SMCO3-201ENST00000316048 SULT1A2P50226 295 aa2.83□□□□□ -1.96
SMCO3-201ENST00000316048 RAB5CP51148 216 aa2.83□□□□□ -1.96
SMCO3-201ENST00000316048 TAS2R30P59541 319 aa2.83□□□□□ -1.96
SMCO3-201ENST00000316048 MEF2CQ06413 473 aaPredicted RBP2.83□□□□□ -1.96
SMCO3-201ENST00000316048 LTC4SQ16873 150 aa2.83□□□□□ -1.96
SMCO3-201ENST00000316048 BOD1L2Q8IYS8 172 aa2.83□□□□□ -1.96
SMCO3-201ENST00000316048 SPAG16Q8N0X2 631 aa2.83□□□□□ -1.96
SMCO3-201ENST00000316048 CCL17Q92583 94 aa2.83□□□□□ -1.96
SMCO3-201ENST00000316048 SMIM8Q96KF7 97 aa2.83□□□□□ -1.96
SMCO3-201ENST00000316048 OR5B12Q96R08 314 aa2.83□□□□□ -1.96
SMCO3-201ENST00000316048 GINS3Q9BRX5 216 aa2.83□□□□□ -1.96
SMCO3-201ENST00000316048 AGMATQ9BSE5 352 aa2.83□□□□□ -1.96
SMCO3-201ENST00000316048 REG4Q9BYZ8 158 aa2.83□□□□□ -1.96
SMCO3-201ENST00000316048 SAV1Q9H4B6 383 aaPredicted RBP2.83□□□□□ -1.96
SMCO3-201ENST00000316048 HEATR1Q9H583 2144 aaKnown RBP2.83□□□□□ -1.96
SMCO3-201ENST00000316048 RETNQ9HD89 108 aa2.83□□□□□ -1.96
SMCO3-201ENST00000316048 TMEM106BQ9NUM4 274 aa2.83□□□□□ -1.96
SMCO3-201ENST00000316048 PSENENQ9NZ42 101 aa2.83□□□□□ -1.96
SMCO3-201ENST00000316048 CLN8Q9UBY8 286 aa2.83□□□□□ -1.96
SMCO3-201ENST00000316048 PRELID3BQ9Y3B1 194 aa2.83□□□□□ -1.96
SMCO3-201ENST00000316048 WSB1Q9Y6I7 421 aa2.83□□□□□ -1.96
SMCO3-201ENST00000316048 ZNF292O60281 2723 aa2.82□□□□□ -1.96
SMCO3-201ENST00000316048 RIF1Q5UIP0 2472 aaKnown RBP2.82□□□□□ -1.96
SMCO3-201ENST00000316048 CACNA1GO43497 2377 aa2.82□□□□□ -1.96
SMCO3-201ENST00000316048 SIVA1O15304 175 aa2.82□□□□□ -1.96
SMCO3-201ENST00000316048 SNAI2O43623 268 aa2.82□□□□□ -1.96
SMCO3-201ENST00000316048 IFNA5P01569 189 aa2.82□□□□□ -1.96
SMCO3-201ENST00000316048 IGKV1-39P01597 117 aa2.82□□□□□ -1.96
SMCO3-201ENST00000316048 IGKV1-5P01602 117 aa2.82□□□□□ -1.96
SMCO3-201ENST00000316048 PRH1P02810 166 aa2.82□□□□□ -1.96
SMCO3-201ENST00000316048 IGKV1D-39P04432 117 aa2.82□□□□□ -1.96
SMCO3-201ENST00000316048 CGB3P0DN86 165 aa2.82□□□□□ -1.96
SMCO3-201ENST00000316048 CGB7P0DN87 165 aa2.82□□□□□ -1.96
SMCO3-201ENST00000316048 OMGP23515 440 aa2.82□□□□□ -1.96
SMCO3-201ENST00000316048 GPR6P46095 362 aaPredicted RBP2.82□□□□□ -1.96
SMCO3-201ENST00000316048 SULT1A1P50225 295 aa2.82□□□□□ -1.96
SMCO3-201ENST00000316048 HBG1P69891 147 aa2.82□□□□□ -1.96
SMCO3-201ENST00000316048 HBG2P69892 147 aa2.82□□□□□ -1.96
SMCO3-201ENST00000316048 NDPQ00604 133 aa2.82□□□□□ -1.96
SMCO3-201ENST00000316048 ZNF816Q0VGE8 651 aaPredicted RBP2.82□□□□□ -1.96
SMCO3-201ENST00000316048 C5orf64Q2M2E5 130 aa2.82□□□□□ -1.96
SMCO3-201ENST00000316048 LRRC10Q5BKY1 277 aa2.82□□□□□ -1.96
SMCO3-201ENST00000316048 FAM201AQ5SY85 155 aa2.82□□□□□ -1.96
SMCO3-201ENST00000316048 CYB5R2Q6BCY4 276 aa2.82□□□□□ -1.96
SMCO3-201ENST00000316048 STPG2Q8N412 459 aa2.82□□□□□ -1.96
SMCO3-201ENST00000316048 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.82□□□□□ -1.96
SMCO3-201ENST00000316048 OR4C5Q8NGB2 326 aa2.82□□□□□ -1.96
SMCO3-201ENST00000316048 OR5C1Q8NGR4 320 aa2.82□□□□□ -1.96
SMCO3-201ENST00000316048 LINC01560Q8TB33 94 aa2.82□□□□□ -1.96
SMCO3-201ENST00000316048 ZNF502Q8TBZ5 544 aa2.82□□□□□ -1.96
SMCO3-201ENST00000316048 SCGB1C1Q8TD33 95 aa2.82□□□□□ -1.96
SMCO3-201ENST00000316048 GNPNAT1Q96EK6 184 aaPredicted RBP2.82□□□□□ -1.96
SMCO3-201ENST00000316048 ADTRPQ96IZ2 230 aa2.82□□□□□ -1.96
SMCO3-201ENST00000316048 GAFA1Q96PS6 74 aa2.82□□□□□ -1.96
SMCO3-201ENST00000316048 PARP12Q9H0J9 701 aaKnown RBP2.82□□□□□ -1.96
SMCO3-201ENST00000316048 ARV1Q9H2C2 271 aa2.82□□□□□ -1.96
SMCO3-201ENST00000316048 C11orf1Q9H5F2 150 aa2.82□□□□□ -1.96
SMCO3-201ENST00000316048 PRORYQ9H606 182 aa2.82□□□□□ -1.96
SMCO3-201ENST00000316048 SLC25A22Q9H936 323 aa2.82□□□□□ -1.96
SMCO3-201ENST00000316048 PARP11Q9NR21 331 aa2.82□□□□□ -1.96
SMCO3-201ENST00000316048 MMP26Q9NRE1 261 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms