RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 CD5LO43866 347 aa11.85□□□□□ -0.51
COL6A2-202ENST00000310645 HLA-DRB1P01911 266 aa11.85□□□□□ -0.51
COL6A2-202ENST00000310645 LIPFP07098 398 aa11.85□□□□□ -0.51
COL6A2-202ENST00000310645 TMEM116Q8NCL8 245 aa11.85□□□□□ -0.51
COL6A2-202ENST00000310645 CHCHD1Q96BP2 118 aaKnown RBP11.85□□□□□ -0.51
COL6A2-202ENST00000310645 AP1S3Q96PC3 154 aa11.85□□□□□ -0.51
COL6A2-202ENST00000310645 CRXO43186 299 aaPredicted RBP11.85□□□□□ -0.51
COL6A2-202ENST00000310645 CGB3P0DN86 165 aa11.85□□□□□ -0.51
COL6A2-202ENST00000310645 CGB7P0DN87 165 aa11.85□□□□□ -0.51
COL6A2-202ENST00000310645 TMEM164Q5U3C3 297 aa11.85□□□□□ -0.51
COL6A2-202ENST00000310645 PEAR1Q5VY43 1037 aaPredicted RBP11.85□□□□□ -0.51
COL6A2-202ENST00000310645 BPIFA4PQ86YQ2 179 aa11.85□□□□□ -0.51
COL6A2-202ENST00000310645 MRPL20Q9BYC9 149 aaKnown RBP11.85□□□□□ -0.51
COL6A2-202ENST00000310645 CSTL1Q9H114 145 aa11.85□□□□□ -0.51
COL6A2-202ENST00000310645 C7orf69Q9H7B7 122 aa11.85□□□□□ -0.51
COL6A2-202ENST00000310645 OR5AL1P0C617 328 aa11.85□□□□□ -0.51
COL6A2-202ENST00000310645 HIST1H1AQ02539 215 aaPredicted RBP11.85□□□□□ -0.51
COL6A2-202ENST00000310645 MZT1Q08AG7 82 aa11.85□□□□□ -0.51
COL6A2-202ENST00000310645 ZNF714Q96N38 554 aa11.85□□□□□ -0.51
COL6A2-202ENST00000310645 PEF1Q9UBV8 284 aaKnown RBP11.85□□□□□ -0.51
COL6A2-202ENST00000310645 FAM231BA6NCW3 169 aa11.84□□□□□ -0.51
COL6A2-202ENST00000310645 KLK10O43240 276 aa11.84□□□□□ -0.51
COL6A2-202ENST00000310645 NBEAP1P0C6P0 100 aa11.84□□□□□ -0.51
COL6A2-202ENST00000310645 COL8A1P27658 744 aa11.84□□□□□ -0.51
COL6A2-202ENST00000310645 HCP5Q6MZN7 132 aa11.84□□□□□ -0.51
COL6A2-202ENST00000310645 Q71RC1 249 aaPredicted RBP11.84□□□□□ -0.51
COL6A2-202ENST00000310645 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.84□□□□□ -0.51
COL6A2-202ENST00000310645 HILPDAQ9Y5L2 63 aa11.84□□□□□ -0.51
COL6A2-202ENST00000310645 PKDREJQ9NTG1 2253 aa11.84□□□□□ -0.51
COL6A2-202ENST00000310645 A0A1W2PNU3 283 aaPredicted RBP11.84□□□□□ -0.51
COL6A2-202ENST00000310645 KIR2DL2P43627 348 aaPredicted RBP11.84□□□□□ -0.51
COL6A2-202ENST00000310645 POU2AF1Q16633 256 aa11.84□□□□□ -0.51
COL6A2-202ENST00000310645 CR1LQ2VPA4 569 aa11.84□□□□□ -0.51
COL6A2-202ENST00000310645 TDHQ8IZJ6 230 aa11.84□□□□□ -0.51
COL6A2-202ENST00000310645 CIARTQ8N365 385 aaPredicted RBP11.84□□□□□ -0.51
COL6A2-202ENST00000310645 CACNG8Q8WXS5 425 aa11.84□□□□□ -0.51
COL6A2-202ENST00000310645 WT1-ASQ06250 92 aa11.83□□□□□ -0.51
COL6A2-202ENST00000310645 WFDC8Q8IUA0 241 aa11.83□□□□□ -0.51
COL6A2-202ENST00000310645 C9orf106Q8NAJ2 232 aa11.83□□□□□ -0.51
COL6A2-202ENST00000310645 SSUH2Q9Y2M2 353 aa11.83□□□□□ -0.51
COL6A2-202ENST00000310645 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.83□□□□□ -0.52
COL6A2-202ENST00000310645 TCRBV4S1A1TA0A5B7 111 aa11.83□□□□□ -0.52
COL6A2-202ENST00000310645 PET117Q6UWS5 81 aa11.83□□□□□ -0.52
COL6A2-202ENST00000310645 RBPMS2Q6ZRY4 209 aaKnown RBP11.83□□□□□ -0.52
COL6A2-202ENST00000310645 RAB37Q96AX2 223 aa11.83□□□□□ -0.52
COL6A2-202ENST00000310645 hADV38S2A0JD32 116 aa11.83□□□□□ -0.52
COL6A2-202ENST00000310645 M0R1B8 84 aa11.83□□□□□ -0.52
COL6A2-202ENST00000310645 APOHP02749 345 aaPredicted RBP11.83□□□□□ -0.52
COL6A2-202ENST00000310645 FAM87AP0C7U9 286 aa11.83□□□□□ -0.52
COL6A2-202ENST00000310645 OR8A1Q8NGG7 326 aa11.83□□□□□ -0.52
COL6A2-202ENST00000310645 H1FXQ92522 213 aaKnown RBP11.83□□□□□ -0.52
COL6A2-202ENST00000310645 HSPB8Q9UJY1 196 aa11.83□□□□□ -0.52
COL6A2-202ENST00000310645 RUSC1-AS1Q66K80 236 aa11.82□□□□□ -0.52
COL6A2-202ENST00000310645 NDUFA4L2Q9NRX3 87 aa11.82□□□□□ -0.52
COL6A2-202ENST00000310645 NCR2O95944 276 aa11.82□□□□□ -0.52
COL6A2-202ENST00000310645 FXYD7P58549 80 aa11.82□□□□□ -0.52
COL6A2-202ENST00000310645 MBNL2Q5VZF2 373 aaKnown RBP11.82□□□□□ -0.52
COL6A2-202ENST00000310645 FAM71F2Q6NXP2 309 aa11.82□□□□□ -0.52
COL6A2-202ENST00000310645 PRNTQ86SH4 94 aa11.82□□□□□ -0.52
COL6A2-202ENST00000310645 EP300Q09472 2414 aaPredicted RBP11.82□□□□□ -0.52
COL6A2-202ENST00000310645 IGKV1D-37A0A075B6S9 117 aa11.82□□□□□ -0.52
COL6A2-202ENST00000310645 H3BUT2 72 aa11.82□□□□□ -0.52
COL6A2-202ENST00000310645 PRSS3P2Q8NHM4 247 aa11.82□□□□□ -0.52
COL6A2-202ENST00000310645 RAB9BQ9NP90 201 aa11.82□□□□□ -0.52
COL6A2-202ENST00000310645 CACNA1GO43497 2377 aa11.81□□□□□ -0.52
COL6A2-202ENST00000310645 LOC389332A0A1B0GUA5 103 aa11.81□□□□□ -0.52
COL6A2-202ENST00000310645 TMEM97Q5BJF2 176 aa11.81□□□□□ -0.52
COL6A2-202ENST00000310645 SPRY4Q9C004 299 aa11.81□□□□□ -0.52
COL6A2-202ENST00000310645 PERPQ96FX8 193 aa11.81□□□□□ -0.52
COL6A2-202ENST00000310645 AP5S1Q9NUS5 200 aa11.81□□□□□ -0.52
COL6A2-202ENST00000310645 DSCAML1Q8TD84 2053 aa11.81□□□□□ -0.52
COL6A2-202ENST00000310645 CNOT1A5YKK6 2376 aaKnown RBP11.8□□□□□ -0.52
COL6A2-202ENST00000310645 IGLC1P0CG04 106 aa11.8□□□□□ -0.52
COL6A2-202ENST00000310645 ACP1P24666 158 aa11.8□□□□□ -0.52
COL6A2-202ENST00000310645 DIAPH2-AS1Q14236 149 aa11.8□□□□□ -0.52
COL6A2-202ENST00000310645 BHLHA15Q7RTS1 189 aaPredicted RBP11.8□□□□□ -0.52
COL6A2-202ENST00000310645 TMEM178AQ8NBL3 297 aa11.8□□□□□ -0.52
COL6A2-202ENST00000310645 FER1L6-AS2Q96M78 137 aa11.8□□□□□ -0.52
COL6A2-202ENST00000310645 Q9H3A6 140 aa11.8□□□□□ -0.52
COL6A2-202ENST00000310645 FA2HQ7L5A8 372 aa11.8□□□□□ -0.52
COL6A2-202ENST00000310645 C1RLQ9NZP8 487 aa11.8□□□□□ -0.52
COL6A2-202ENST00000310645 BOD1L1Q8NFC6 3051 aa11.8□□□□□ -0.52
COL6A2-202ENST00000310645 TMEM265A0A087WTH1 108 aa11.8□□□□□ -0.52
COL6A2-202ENST00000310645 CCL3L1P16619 93 aa11.8□□□□□ -0.52
COL6A2-202ENST00000310645 SLC25A48Q6ZT89 311 aaKnown RBP11.8□□□□□ -0.52
COL6A2-202ENST00000310645 C2orf91Q6ZV80 131 aa11.8□□□□□ -0.52
COL6A2-202ENST00000310645 MLST8Q9BVC4 326 aa11.8□□□□□ -0.52
COL6A2-202ENST00000310645 MS4A6AQ9H2W1 248 aa11.8□□□□□ -0.52
COL6A2-202ENST00000310645 RPUSD1Q9UJJ7 312 aaKnown RBP11.8□□□□□ -0.52
COL6A2-202ENST00000310645 LAMTOR5O43504 91 aa11.79□□□□□ -0.52
COL6A2-202ENST00000310645 TCRAP04437 139 aa11.79□□□□□ -0.52
COL6A2-202ENST00000310645 COX8AP10176 69 aa11.79□□□□□ -0.52
COL6A2-202ENST00000310645 SUB1P53999 127 aaKnown RBP eCLIP11.79□□□□□ -0.52
COL6A2-202ENST00000310645 NHLH1Q02575 133 aa11.79□□□□□ -0.52
COL6A2-202ENST00000310645 GUSBP1Q15486 140 aa11.79□□□□□ -0.52
COL6A2-202ENST00000310645 GOLT1AQ6ZVE7 132 aa11.79□□□□□ -0.52
COL6A2-202ENST00000310645 FER1L6-AS1Q8NA97 138 aa11.79□□□□□ -0.52
COL6A2-202ENST00000310645 NEU4Q8WWR8 484 aaPredicted RBP11.79□□□□□ -0.52
COL6A2-202ENST00000310645 SRSF12Q8WXF0 261 aaKnown RBP11.79□□□□□ -0.52
COL6A2-202ENST00000310645 PRSS22Q9GZN4 317 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms