RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 SIGLEC12Q96PQ1 595 aa10.12□□□□□ -0.79
PCF11-201ENST00000298281 IGLV3-21P80748 117 aaPredicted RBP10.12□□□□□ -0.79
PCF11-201ENST00000298281 ZNF474Q6S9Z5 364 aaPredicted RBP10.12□□□□□ -0.79
PCF11-201ENST00000298281 TGIF1Q15583 401 aa10.12□□□□□ -0.79
PCF11-201ENST00000298281 C1orf159Q96HA4 380 aa10.12□□□□□ -0.79
PCF11-201ENST00000298281 IGKCP01834 107 aa10.11□□□□□ -0.79
PCF11-201ENST00000298281 RPL39P5Q59GN2 51 aa10.11□□□□□ -0.79
PCF11-201ENST00000298281 TRAV40A0A0B4J280 105 aa10.11□□□□□ -0.79
PCF11-201ENST00000298281 LCNL1Q6ZST4 164 aa10.11□□□□□ -0.79
PCF11-201ENST00000298281 IFI27L2Q9H2X8 130 aa10.11□□□□□ -0.79
PCF11-201ENST00000298281 GAGE13Q4V321 117 aa10.11□□□□□ -0.79
PCF11-201ENST00000298281 TEX43Q6ZNM6 134 aa10.11□□□□□ -0.79
PCF11-201ENST00000298281 RASL10AQ92737 203 aa10.11□□□□□ -0.79
PCF11-201ENST00000298281 C2orf16Q68DN1 1984 aa10.11□□□□□ -0.79
PCF11-201ENST00000298281 FAM90A9PA6NNJ1 464 aa10.11□□□□□ -0.79
PCF11-201ENST00000298281 SEC11AP67812 179 aa10.11□□□□□ -0.79
PCF11-201ENST00000298281 ACP7Q6ZNF0 438 aa10.11□□□□□ -0.79
PCF11-201ENST00000298281 TRAV13-1A0A0B4J241 112 aa10.11□□□□□ -0.79
PCF11-201ENST00000298281 TMEM190Q8WZ59 177 aa10.11□□□□□ -0.79
PCF11-201ENST00000298281 SRXN1Q9BYN0 137 aa10.11□□□□□ -0.79
PCF11-201ENST00000298281 TRAV5A0A0B4J249 113 aa10.11□□□□□ -0.79
PCF11-201ENST00000298281 CFHR3Q02985 330 aa10.1□□□□□ -0.79
PCF11-201ENST00000298281 ARFGEF1Q9Y6D6 1849 aa10.1□□□□□ -0.79
PCF11-201ENST00000298281 GAS1P54826 345 aa10.1□□□□□ -0.79
PCF11-201ENST00000298281 GDF15Q99988 308 aa10.1□□□□□ -0.79
PCF11-201ENST00000298281 PSG1P11464 419 aa10.1□□□□□ -0.79
PCF11-201ENST00000298281 A0A1W2PPI3 338 aa10.1□□□□□ -0.79
PCF11-201ENST00000298281 PAX8Q06710 450 aa10.1□□□□□ -0.79
PCF11-201ENST00000298281 LINC00518Q8N0U6 118 aa10.1□□□□□ -0.79
PCF11-201ENST00000298281 TM2D1Q9BX74 207 aa10.1□□□□□ -0.79
PCF11-201ENST00000298281 ZNF876PQ49A33 203 aa10.09□□□□□ -0.79
PCF11-201ENST00000298281 RNF114Q9Y508 228 aa10.09□□□□□ -0.79
PCF11-201ENST00000298281 SCO2A0A1W2PP80 73 aa10.09□□□□□ -0.79
PCF11-201ENST00000298281 DAD1P61803 113 aa10.09□□□□□ -0.79
PCF11-201ENST00000298281 RHOGP84095 191 aa10.09□□□□□ -0.79
PCF11-201ENST00000298281 C8orf31Q8N9H6 132 aa10.09□□□□□ -0.79
PCF11-201ENST00000298281 IMMP1LQ96LU5 166 aa10.09□□□□□ -0.79
PCF11-201ENST00000298281 CSRP2Q16527 193 aa10.09□□□□□ -0.79
PCF11-201ENST00000298281 LAGE3Q14657 143 aa10.09□□□□□ -0.79
PCF11-201ENST00000298281 SAMD5Q5TGI4 173 aa10.09□□□□□ -0.79
PCF11-201ENST00000298281 A8MXK9 166 aa10.09□□□□□ -0.79
PCF11-201ENST00000298281 F8VVB4 439 aa10.09□□□□□ -0.79
PCF11-201ENST00000298281 F8VWA3 439 aa10.09□□□□□ -0.79
PCF11-201ENST00000298281 SOCS3O14543 225 aa10.09□□□□□ -0.79
PCF11-201ENST00000298281 SIGLEC5O15389 551 aa10.09□□□□□ -0.79
PCF11-201ENST00000298281 HAMPP81172 84 aa10.09□□□□□ -0.79
PCF11-201ENST00000298281 ASPHD2Q6ICH7 369 aa10.09□□□□□ -0.79
PCF11-201ENST00000298281 IL36BQ9NZH7 164 aa10.09□□□□□ -0.79
PCF11-201ENST00000298281 MRPS18CQ9Y3D5 142 aaKnown RBP10.09□□□□□ -0.79
PCF11-201ENST00000298281 DMRT1Q9Y5R6 373 aa10.09□□□□□ -0.79
PCF11-201ENST00000298281 ATP1A1-AS1Q5TC04 95 aa10.09□□□□□ -0.79
PCF11-201ENST00000298281 SHANK3Q9BYB0 1731 aa10.08□□□□□ -0.8
PCF11-201ENST00000298281 WNT2P09544 360 aa10.08□□□□□ -0.8
PCF11-201ENST00000298281 LINC01590Q5TEZ4 76 aa10.08□□□□□ -0.8
PCF11-201ENST00000298281 RASL11AQ6T310 242 aa10.08□□□□□ -0.8
PCF11-201ENST00000298281 CEACAM1P13688 526 aa10.08□□□□□ -0.8
PCF11-201ENST00000298281 IGFBP2P18065 325 aa10.08□□□□□ -0.8
PCF11-201ENST00000298281 LY6DQ14210 128 aa10.08□□□□□ -0.8
PCF11-201ENST00000298281 ZXDCQ2QGD7 858 aaPredicted RBP10.08□□□□□ -0.8
PCF11-201ENST00000298281 LINC00312Q9Y6C7 94 aa10.08□□□□□ -0.8
PCF11-201ENST00000298281 LINC01549A6NIU2 74 aa10.08□□□□□ -0.8
PCF11-201ENST00000298281 FAM110DQ8TAY7 271 aaPredicted RBP10.08□□□□□ -0.8
PCF11-201ENST00000298281 FAM166AQ6J272 317 aa10.08□□□□□ -0.8
PCF11-201ENST00000298281 PPP1R32Q7Z5V6 425 aa10.08□□□□□ -0.8
PCF11-201ENST00000298281 TMEM158Q8WZ71 300 aa10.08□□□□□ -0.8
PCF11-201ENST00000298281 RCC1LQ96I51 464 aaKnown RBP10.08□□□□□ -0.8
PCF11-201ENST00000298281 TMEM219Q86XT9 240 aa10.08□□□□□ -0.8
PCF11-201ENST00000298281 IMMP2LQ96T52 175 aa10.08□□□□□ -0.8
PCF11-201ENST00000298281 C1QTNF4Q9BXJ3 329 aa10.08□□□□□ -0.8
PCF11-201ENST00000298281 KLF5Q13887 457 aaPredicted RBP10.07□□□□□ -0.8
PCF11-201ENST00000298281 RMI2Q96E14 147 aa10.07□□□□□ -0.8
PCF11-201ENST00000298281 PIN1P1O15428 100 aa10.07□□□□□ -0.8
PCF11-201ENST00000298281 PLXNB1O43157 2135 aa10.07□□□□□ -0.8
PCF11-201ENST00000298281 THBDP07204 575 aa10.07□□□□□ -0.8
PCF11-201ENST00000298281 H2BFSP57053 126 aa10.07□□□□□ -0.8
PCF11-201ENST00000298281 NHLRC3Q5JS37 347 aa10.07□□□□□ -0.8
PCF11-201ENST00000298281 C9orf153Q5TBE3 101 aa10.07□□□□□ -0.8
PCF11-201ENST00000298281 TIMM17AQ99595 171 aa10.07□□□□□ -0.8
PCF11-201ENST00000298281 Q71RC1 249 aaPredicted RBP10.07□□□□□ -0.8
PCF11-201ENST00000298281 C14orf132Q9NPU4 83 aa10.07□□□□□ -0.8
PCF11-201ENST00000298281 LINC00527Q9UJ94 153 aa10.07□□□□□ -0.8
PCF11-201ENST00000298281 HELZP42694 1942 aaKnown RBP10.07□□□□□ -0.8
PCF11-201ENST00000298281 ZNF708P17019 499 aa10.07□□□□□ -0.8
PCF11-201ENST00000298281 PRIMA1Q86XR5 153 aa10.07□□□□□ -0.8
PCF11-201ENST00000298281 TNRC6AQ8NDV7 1962 aaKnown RBP10.07□□□□□ -0.8
PCF11-201ENST00000298281 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.07□□□□□ -0.8
PCF11-201ENST00000298281 TET2Q6N021 2002 aaPredicted RBP10.06□□□□□ -0.8
PCF11-201ENST00000298281 CECR9P0C854 216 aa10.06□□□□□ -0.8
PCF11-201ENST00000298281 FOXL2P58012 376 aa10.06□□□□□ -0.8
PCF11-201ENST00000298281 MESP2Q0VG99 397 aa10.06□□□□□ -0.8
PCF11-201ENST00000298281 C1orf43Q9BWL3 253 aa10.06□□□□□ -0.8
PCF11-201ENST00000298281 FAM27E3Q08E93 113 aa10.06□□□□□ -0.8
PCF11-201ENST00000298281 ATP5L2Q7Z4Y8 100 aa10.06□□□□□ -0.8
PCF11-201ENST00000298281 LOC101059948A0A1B0GTJ6 334 aa10.06□□□□□ -0.8
PCF11-201ENST00000298281 IFITM3Q01628 133 aa10.06□□□□□ -0.8
PCF11-201ENST00000298281 LSM4Q9Y4Z0 139 aaKnown RBP10.06□□□□□ -0.8
PCF11-201ENST00000298281 C12orf77C9JDV5 145 aa10.06□□□□□ -0.8
PCF11-201ENST00000298281 UBR3Q6ZT12 1888 aa10.06□□□□□ -0.8
PCF11-201ENST00000298281 NCOA6Q14686 2063 aaPredicted RBP10.06□□□□□ -0.8
PCF11-201ENST00000298281 UMODP07911 640 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms