RNA–Protein interactions for RNA: ENST00000295887.5

CDS1-201, Transcript of CDP-diacylglycerol synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDS1, Length 4,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDS1-201ENST00000295887 CX3CL1P78423 397 aa13.61□□□□□ -0.23
CDS1-201ENST00000295887 TMEM200BQ69YZ2 307 aa13.61□□□□□ -0.23
CDS1-201ENST00000295887 ZNF474Q6S9Z5 364 aaPredicted RBP13.61□□□□□ -0.23
CDS1-201ENST00000295887 PRELID3AQ96N28 172 aa13.61□□□□□ -0.23
CDS1-201ENST00000295887 HTTP42858 3142 aa13.61□□□□□ -0.23
CDS1-201ENST00000295887 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.6□□□□□ -0.23
CDS1-201ENST00000295887 METTL26Q96S19 204 aa13.6□□□□□ -0.23
CDS1-201ENST00000295887 DCAF16Q9NXF7 216 aa13.6□□□□□ -0.23
CDS1-201ENST00000295887 C7orf71A4D174 169 aa13.6□□□□□ -0.23
CDS1-201ENST00000295887 PF4V1P10720 104 aa13.6□□□□□ -0.23
CDS1-201ENST00000295887 C21orf62Q9NYP8 219 aa13.6□□□□□ -0.23
CDS1-201ENST00000295887 ZNF124Q15973 351 aa13.6□□□□□ -0.23
CDS1-201ENST00000295887 ZNF502Q8TBZ5 544 aa13.6□□□□□ -0.23
CDS1-201ENST00000295887 UCNP55089 124 aa13.6□□□□□ -0.23
CDS1-201ENST00000295887 DUX4L9Q6RFH8 374 aaPredicted RBP13.6□□□□□ -0.23
CDS1-201ENST00000295887 TRAV8-1A0A0A6YYK1 113 aa13.59□□□□□ -0.23
CDS1-201ENST00000295887 EREGO14944 169 aa13.59□□□□□ -0.23
CDS1-201ENST00000295887 PSG9Q00887 426 aa13.59□□□□□ -0.23
CDS1-201ENST00000295887 RPRMLQ8N4K4 120 aa13.59□□□□□ -0.23
CDS1-201ENST00000295887 Q8NFD4 153 aa13.59□□□□□ -0.23
CDS1-201ENST00000295887 TSKUQ8WUA8 353 aa13.59□□□□□ -0.23
CDS1-201ENST00000295887 TLN1Q9Y490 2541 aaKnown RBP13.59□□□□□ -0.23
CDS1-201ENST00000295887 GPR183P32249 361 aa13.59□□□□□ -0.23
CDS1-201ENST00000295887 TM4SF20Q53R12 229 aa13.59□□□□□ -0.23
CDS1-201ENST00000295887 NIT1Q86X76 327 aa13.59□□□□□ -0.23
CDS1-201ENST00000295887 EXOC3-AS1Q8N2X6 119 aa13.59□□□□□ -0.23
CDS1-201ENST00000295887 KLF2Q9Y5W3 355 aaPredicted RBP13.59□□□□□ -0.23
CDS1-201ENST00000295887 MED12LQ86YW9 2145 aa13.59□□□□□ -0.23
CDS1-201ENST00000295887 IGHG3P01860 377 aa13.58□□□□□ -0.23
CDS1-201ENST00000295887 SAPCD1Q5SSQ6 148 aa13.58□□□□□ -0.23
CDS1-201ENST00000295887 ZNF414Q96IQ9 312 aa13.58□□□□□ -0.23
CDS1-201ENST00000295887 LTBP2Q14767 1821 aa13.58□□□□□ -0.23
CDS1-201ENST00000295887 GAFA1Q96PS6 74 aa13.58□□□□□ -0.24
CDS1-201ENST00000295887 A8MWP6 167 aa13.58□□□□□ -0.24
CDS1-201ENST00000295887 NUTF2P61970 127 aaKnown RBP13.58□□□□□ -0.24
CDS1-201ENST00000295887 OR10J3Q5JRS4 329 aa13.58□□□□□ -0.24
CDS1-201ENST00000295887 FBXL7Q9UJT9 491 aa13.58□□□□□ -0.24
CDS1-201ENST00000295887 TRBV20OR9-2A0A075B6H5 130 aa13.58□□□□□ -0.24
CDS1-201ENST00000295887 RAXQ9Y2V3 346 aa13.58□□□□□ -0.24
CDS1-201ENST00000295887 TRAV9-2A0A087WT02 112 aa13.57□□□□□ -0.24
CDS1-201ENST00000295887 RNASE2P10153 161 aaKnown RBP13.57□□□□□ -0.24
CDS1-201ENST00000295887 TIMM23O14925 209 aa13.57□□□□□ -0.24
CDS1-201ENST00000295887 LINC00614P0C842 121 aa13.57□□□□□ -0.24
CDS1-201ENST00000295887 C3orf79P0CE67 100 aa13.57□□□□□ -0.24
CDS1-201ENST00000295887 BEND2Q8NDZ0 799 aa13.57□□□□□ -0.24
CDS1-201ENST00000295887 RNF125Q96EQ8 232 aa13.57□□□□□ -0.24
CDS1-201ENST00000295887 PSG1P11464 419 aa13.57□□□□□ -0.24
CDS1-201ENST00000295887 KLF17Q5JT82 389 aaPredicted RBP13.57□□□□□ -0.24
CDS1-201ENST00000295887 SCRT1Q9BWW7 348 aa13.57□□□□□ -0.24
CDS1-201ENST00000295887 ZNF134P52741 427 aa13.56□□□□□ -0.24
CDS1-201ENST00000295887 CIARTQ8N365 385 aaPredicted RBP13.56□□□□□ -0.24
CDS1-201ENST00000295887 OTORQ9NRC9 128 aa13.56□□□□□ -0.24
CDS1-201ENST00000295887 PMS2P5A8MQ11 134 aa13.56□□□□□ -0.24
CDS1-201ENST00000295887 H0YJW9 148 aa13.56□□□□□ -0.24
CDS1-201ENST00000295887 RPS20P60866 119 aaKnown RBP13.56□□□□□ -0.24
CDS1-201ENST00000295887 LY6EQ16553 131 aa13.56□□□□□ -0.24
CDS1-201ENST00000295887 DENND4AQ7Z401 1863 aa13.56□□□□□ -0.24
CDS1-201ENST00000295887 LAMA3Q16787 3333 aa13.56□□□□□ -0.24
CDS1-201ENST00000295887 CSPG4Q6UVK1 2322 aa13.56□□□□□ -0.24
CDS1-201ENST00000295887 WNT2P09544 360 aa13.56□□□□□ -0.24
CDS1-201ENST00000295887 SLC25A48Q6ZT89 311 aaKnown RBP13.56□□□□□ -0.24
CDS1-201ENST00000295887 NUP35Q8NFH5 326 aa13.56□□□□□ -0.24
CDS1-201ENST00000295887 SOX21Q9Y651 276 aaPredicted RBP13.56□□□□□ -0.24
CDS1-201ENST00000295887 GPX1P07203 203 aa13.55□□□□□ -0.24
CDS1-201ENST00000295887 NPPCP23582 126 aa13.55□□□□□ -0.24
CDS1-201ENST00000295887 VDAC2P45880 294 aaPredicted RBP13.55□□□□□ -0.24
CDS1-201ENST00000295887 PSG8Q9UQ74 426 aa13.55□□□□□ -0.24
CDS1-201ENST00000295887 PRSS8Q16651 343 aa13.55□□□□□ -0.24
CDS1-201ENST00000295887 OR10J6PQ8NGY7 276 aa13.55□□□□□ -0.24
CDS1-201ENST00000295887 TMEM167AQ8TBQ9 72 aa13.55□□□□□ -0.24
CDS1-201ENST00000295887 C5orf42Q9H799 3197 aa13.55□□□□□ -0.24
CDS1-201ENST00000295887 LAMA2P24043 3122 aaKnown RBP13.55□□□□□ -0.24
CDS1-201ENST00000295887 NBR2O15453 112 aa13.55□□□□□ -0.24
CDS1-201ENST00000295887 LYPD2Q6UXB3 125 aa13.55□□□□□ -0.24
CDS1-201ENST00000295887 ARPC1AQ92747 370 aa13.55□□□□□ -0.24
CDS1-201ENST00000295887 CHODLQ9H9P2 273 aa13.55□□□□□ -0.24
CDS1-201ENST00000295887 PHLDA3Q9Y5J5 127 aa13.55□□□□□ -0.24
CDS1-201ENST00000295887 TRAV8-6A0A0B4J262 113 aa13.54□□□□□ -0.24
CDS1-201ENST00000295887 FABP2P12104 132 aa13.54□□□□□ -0.24
CDS1-201ENST00000295887 ASPHD1Q5U4P2 390 aa13.54□□□□□ -0.24
CDS1-201ENST00000295887 C2orf88Q9BSF0 95 aa13.54□□□□□ -0.24
CDS1-201ENST00000295887 TMEM208Q9BTX3 173 aa13.54□□□□□ -0.24
CDS1-201ENST00000295887 MBD3L4A6NDZ8 208 aaPredicted RBP13.54□□□□□ -0.24
CDS1-201ENST00000295887 MBD3L3A6NE82 208 aaPredicted RBP13.54□□□□□ -0.24
CDS1-201ENST00000295887 MBD3L5A6NJ08 208 aaPredicted RBP13.54□□□□□ -0.24
CDS1-201ENST00000295887 TMEM178BH3BS89 294 aa13.54□□□□□ -0.24
CDS1-201ENST00000295887 PPIFP30405 207 aaKnown RBP13.54□□□□□ -0.24
CDS1-201ENST00000295887 CDKN1AP38936 164 aa13.54□□□□□ -0.24
CDS1-201ENST00000295887 LURAP1LQ8IV03 231 aa13.54□□□□□ -0.24
CDS1-201ENST00000295887 SPACA3Q8IXA5 215 aa13.54□□□□□ -0.24
CDS1-201ENST00000295887 MBD3L2Q8NHZ7 208 aaPredicted RBP13.54□□□□□ -0.24
CDS1-201ENST00000295887 POLR3KQ9Y2Y1 108 aaPredicted RBP13.54□□□□□ -0.24
CDS1-201ENST00000295887 A1L4Q6 167 aa13.54□□□□□ -0.24
CDS1-201ENST00000295887 IGHV1-8P0DP01 117 aa13.54□□□□□ -0.24
CDS1-201ENST00000295887 ZNF138P52744 262 aa13.54□□□□□ -0.24
CDS1-201ENST00000295887 Q6ZSR3 168 aa13.54□□□□□ -0.24
CDS1-201ENST00000295887 ORMDL3Q8N138 153 aa13.54□□□□□ -0.24
CDS1-201ENST00000295887 TMEM160Q9NX00 188 aa13.54□□□□□ -0.24
CDS1-201ENST00000295887 DNLZQ5SXM8 178 aa13.54□□□□□ -0.24
CDS1-201ENST00000295887 ASCL2Q99929 193 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms