RNA–Protein interactions for RNA: ENST00000291525.11

TFF3-201, Transcript of trefoil factor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TFF3, Length 407 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-201ENST00000291525 TBC1D24Q9ULP9 559 aa12.61□□□□□ -0.39
TFF3-201ENST00000291525 IGLL5B9A064 214 aa12.6□□□□□ -0.39
TFF3-201ENST00000291525 FAM90A26D6RGX4 464 aa12.6□□□□□ -0.39
TFF3-201ENST00000291525 FABP1P07148 127 aa12.6□□□□□ -0.39
TFF3-201ENST00000291525 OR51G1Q8NGK1 321 aa12.6□□□□□ -0.39
TFF3-201ENST00000291525 BUB3O43684 328 aa12.59□□□□□ -0.39
TFF3-201ENST00000291525 RBMY1A1P0DJD3 496 aaKnown RBP12.59□□□□□ -0.39
TFF3-201ENST00000291525 RBMY1CP0DJD4 496 aa12.59□□□□□ -0.39
TFF3-201ENST00000291525 KLF9Q13886 244 aaPredicted RBP12.59□□□□□ -0.39
TFF3-201ENST00000291525 RBMY1FQ15415 496 aaKnown RBP12.59□□□□□ -0.39
TFF3-201ENST00000291525 OR1S1Q8NH92 325 aa12.59□□□□□ -0.39
TFF3-201ENST00000291525 RNF125Q96EQ8 232 aa12.59□□□□□ -0.39
TFF3-201ENST00000291525 SLC35E1Q96K37 410 aa12.59□□□□□ -0.39
TFF3-201ENST00000291525 RBKSQ9H477 322 aa12.59□□□□□ -0.39
TFF3-201ENST00000291525 PRR13Q9NZ81 148 aa12.59□□□□□ -0.39
TFF3-201ENST00000291525 TRAV10A0A0B4J240 114 aa12.58□□□□□ -0.4
TFF3-201ENST00000291525 DUXBA0A1W2PPF3 345 aa12.58□□□□□ -0.4
TFF3-201ENST00000291525 FABP12A6NFH5 140 aa12.58□□□□□ -0.4
TFF3-201ENST00000291525 ZFP92A6NM28 416 aa12.58□□□□□ -0.4
TFF3-201ENST00000291525 PSG1P11464 419 aa12.58□□□□□ -0.4
TFF3-201ENST00000291525 HLA-DMBP28068 263 aa12.58□□□□□ -0.4
TFF3-201ENST00000291525 GPX4P36969 197 aaPredicted RBP12.58□□□□□ -0.4
TFF3-201ENST00000291525 OR8G2PQ6IF36 304 aa12.58□□□□□ -0.4
TFF3-201ENST00000291525 LYZL2Q7Z4W2 148 aa12.58□□□□□ -0.4
TFF3-201ENST00000291525 CLEC5AQ9NY25 188 aa12.58□□□□□ -0.4
TFF3-201ENST00000291525 X6R8D5 127 aa12.58□□□□□ -0.4
TFF3-201ENST00000291525 AP3S2P59780 193 aa12.57□□□□□ -0.4
TFF3-201ENST00000291525 PBDC1Q9BVG4 233 aa12.57□□□□□ -0.4
TFF3-201ENST00000291525 KMT2AQ03164 3969 aa12.56□□□□□ -0.4
TFF3-201ENST00000291525 TNFSF8P32971 234 aa12.56□□□□□ -0.4
TFF3-201ENST00000291525 NKX2-1P43699 371 aaPredicted RBP12.56□□□□□ -0.4
TFF3-201ENST00000291525 RAB11AP62491 216 aa12.56□□□□□ -0.4
TFF3-201ENST00000291525 SUPT4H1P63272 117 aaKnown RBP12.56□□□□□ -0.4
TFF3-201ENST00000291525 CSNK1G2-AS1Q8NCQ2 148 aa12.56□□□□□ -0.4
TFF3-201ENST00000291525 MCFD2Q8NI22 146 aa12.56□□□□□ -0.4
TFF3-201ENST00000291525 SLIRPQ9GZT3 109 aaKnown RBP12.56□□□□□ -0.4
TFF3-201ENST00000291525 APLNQ9ULZ1 77 aa12.56□□□□□ -0.4
TFF3-201ENST00000291525 ELOA3CA0A087WX78 387 aaPredicted RBP12.55□□□□□ -0.4
TFF3-201ENST00000291525 H3BMM0 161 aa12.55□□□□□ -0.4
TFF3-201ENST00000291525 HLA-DRB4P13762 266 aa12.55□□□□□ -0.4
TFF3-201ENST00000291525 ID1P41134 155 aa12.55□□□□□ -0.4
TFF3-201ENST00000291525 TMEM128Q5BJH2 165 aa12.55□□□□□ -0.4
TFF3-201ENST00000291525 Q6ZTC4 211 aa12.55□□□□□ -0.4
TFF3-201ENST00000291525 SOSTQ9BQB4 213 aa12.55□□□□□ -0.4
TFF3-201ENST00000291525 XCL2Q9UBD3 114 aa12.55□□□□□ -0.4
TFF3-201ENST00000291525 HLA-DRB4X5D2U9 266 aa12.55□□□□□ -0.4
TFF3-201ENST00000291525 H3BMQ9 156 aa12.54□□□□□ -0.4
TFF3-201ENST00000291525 MED6O75586 246 aa12.54□□□□□ -0.4
TFF3-201ENST00000291525 LYZP61626 148 aa12.54□□□□□ -0.4
TFF3-201ENST00000291525 GAMTQ14353 236 aa12.54□□□□□ -0.4
TFF3-201ENST00000291525 C1orf194Q5T5A4 169 aa12.54□□□□□ -0.4
TFF3-201ENST00000291525 TMED4Q7Z7H5 227 aa12.54□□□□□ -0.4
TFF3-201ENST00000291525 TOMM5Q8N4H5 51 aa12.54□□□□□ -0.4
TFF3-201ENST00000291525 PPP1R14BQ96C90 147 aa12.54□□□□□ -0.4
TFF3-201ENST00000291525 RNF126Q9BV68 326 aa12.54□□□□□ -0.4
TFF3-201ENST00000291525 IGHV4-4A0A075B6R2 117 aa12.53□□□□□ -0.4
TFF3-201ENST00000291525 SNRPGP15A8MWD9 76 aa12.53□□□□□ -0.4
TFF3-201ENST00000291525 SLC25A6P12236 298 aa12.53□□□□□ -0.4
TFF3-201ENST00000291525 PSMB3P49720 205 aa12.53□□□□□ -0.4
TFF3-201ENST00000291525 RPP30P78346 268 aaKnown RBP12.53□□□□□ -0.4
TFF3-201ENST00000291525 SAMD13Q5VXD3 122 aa12.53□□□□□ -0.4
TFF3-201ENST00000291525 COQ8AQ8NI60 647 aa12.53□□□□□ -0.4
TFF3-201ENST00000291525 DEDD2Q8WXF8 326 aa12.53□□□□□ -0.4
TFF3-201ENST00000291525 CIB3Q96Q77 187 aaPredicted RBP12.53□□□□□ -0.4
TFF3-201ENST00000291525 PAIP2BQ9ULR5 123 aaKnown RBP12.53□□□□□ -0.4
TFF3-201ENST00000291525 VAMP1P23763 118 aa12.52□□□□□ -0.41
TFF3-201ENST00000291525 PRR20EP86478 221 aa12.52□□□□□ -0.41
TFF3-201ENST00000291525 PRR20CP86479 221 aa12.52□□□□□ -0.41
TFF3-201ENST00000291525 PRR20DP86480 221 aa12.52□□□□□ -0.41
TFF3-201ENST00000291525 PRR20BP86481 221 aa12.52□□□□□ -0.41
TFF3-201ENST00000291525 PRR20AP86496 221 aa12.52□□□□□ -0.41
TFF3-201ENST00000291525 ZNF90Q03938 601 aa12.52□□□□□ -0.41
TFF3-201ENST00000291525 PYDC2Q56P42 97 aa12.52□□□□□ -0.41
TFF3-201ENST00000291525 FOXI2Q6ZQN5 318 aa12.52□□□□□ -0.41
TFF3-201ENST00000291525 LINC00052Q96N35 136 aa12.52□□□□□ -0.41
TFF3-201ENST00000291525 TRGV9Q99603 122 aa12.52□□□□□ -0.41
TFF3-201ENST00000291525 SLC25A21Q9BQT8 299 aaPredicted RBP12.52□□□□□ -0.41
TFF3-201ENST00000291525 IGKV1D-37A0A075B6S9 117 aa12.51□□□□□ -0.41
TFF3-201ENST00000291525 DEFB131BA0A096LNP1 70 aa12.51□□□□□ -0.41
TFF3-201ENST00000291525 TMEM189A5PLL7 270 aa12.51□□□□□ -0.41
TFF3-201ENST00000291525 PITX3O75364 302 aa12.51□□□□□ -0.41
TFF3-201ENST00000291525 CFDP00746 253 aaPredicted RBP12.51□□□□□ -0.41
TFF3-201ENST00000291525 IAPPP10997 89 aa12.51□□□□□ -0.41
TFF3-201ENST00000291525 S100A7P31151 101 aa12.51□□□□□ -0.41
TFF3-201ENST00000291525 SPATA31B1PQ5VZV4 182 aa12.51□□□□□ -0.41
TFF3-201ENST00000291525 LRTM2Q8N967 370 aa12.51□□□□□ -0.41
TFF3-201ENST00000291525 NEU1Q99519 415 aa12.51□□□□□ -0.41
TFF3-201ENST00000291525 SAV1Q9H4B6 383 aaPredicted RBP12.51□□□□□ -0.41
TFF3-201ENST00000291525 CELA1Q9UNI1 258 aa12.51□□□□□ -0.41
TFF3-201ENST00000291525 TMED3Q9Y3Q3 217 aa12.51□□□□□ -0.41
TFF3-201ENST00000291525 SMIM9A6NGZ8 99 aa12.5□□□□□ -0.41
TFF3-201ENST00000291525 AMBPP02760 352 aa12.5□□□□□ -0.41
TFF3-201ENST00000291525 S100A5P33763 92 aa12.5□□□□□ -0.41
TFF3-201ENST00000291525 MEOX2P50222 304 aa12.5□□□□□ -0.41
TFF3-201ENST00000291525 GGNBP1Q5YKI7 109 aa12.5□□□□□ -0.41
TFF3-201ENST00000291525 OR8I2Q8N0Y5 310 aa12.5□□□□□ -0.41
TFF3-201ENST00000291525 TRIM63Q969Q1 353 aa12.5□□□□□ -0.41
TFF3-201ENST00000291525 CLUHP3Q96NS8 147 aa12.5□□□□□ -0.41
TFF3-201ENST00000291525 FRAS1Q86XX4 4008 aa12.5□□□□□ -0.41
TFF3-201ENST00000291525 TEX48A0A1B0GUV7 120 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms