RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 URGCP-MRPS24S4R325 110 aa16.52■□□□□ 0.24
YBX3-202ENST00000279550 CXCL1P09341 107 aa16.51■□□□□ 0.23
YBX3-202ENST00000279550 OR5AU1Q8NGC0 362 aa16.51■□□□□ 0.23
YBX3-202ENST00000279550 PFDN5Q99471 154 aa16.51■□□□□ 0.23
YBX3-202ENST00000279550 A0A0U1RQK1 487 aa16.5■□□□□ 0.23
YBX3-202ENST00000279550 IGLC1P0CG04 106 aa16.5■□□□□ 0.23
YBX3-202ENST00000279550 BPIFB3P59826 476 aa16.5■□□□□ 0.23
YBX3-202ENST00000279550 TRBV20OR9-2A0A075B6H5 130 aa16.5■□□□□ 0.23
YBX3-202ENST00000279550 TGIF2-C20orf24A0A0A6YYL0 155 aa16.5■□□□□ 0.23
YBX3-202ENST00000279550 CXorf65A6NEN9 183 aa16.5■□□□□ 0.23
YBX3-202ENST00000279550 FAM106CPP0CH98 169 aa16.5■□□□□ 0.23
YBX3-202ENST00000279550 PYYP10082 97 aa16.5■□□□□ 0.23
YBX3-202ENST00000279550 EGR2P11161 476 aaPredicted RBP16.5■□□□□ 0.23
YBX3-202ENST00000279550 BRS3P32247 399 aa16.5■□□□□ 0.23
YBX3-202ENST00000279550 TIGITQ495A1 244 aa16.5■□□□□ 0.23
YBX3-202ENST00000279550 C16orf82Q7Z2V1 217 aa16.5■□□□□ 0.23
YBX3-202ENST00000279550 C11orf52Q96A22 123 aa16.5■□□□□ 0.23
YBX3-202ENST00000279550 IGHV7-81A0A0B4J1V7 117 aa16.49■□□□□ 0.23
YBX3-202ENST00000279550 PGPEP1LA6NFU8 196 aa16.49■□□□□ 0.23
YBX3-202ENST00000279550 ORM2P19652 201 aa16.49■□□□□ 0.23
YBX3-202ENST00000279550 OR1B1Q8NGR6 318 aa16.49■□□□□ 0.23
YBX3-202ENST00000279550 AURKAIP1Q9NWT8 199 aaPredicted RBP16.49■□□□□ 0.23
YBX3-202ENST00000279550 ARL2-SNX15V9GYD0 113 aa16.49■□□□□ 0.23
YBX3-202ENST00000279550 ABCA1O95477 2261 aa16.49■□□□□ 0.23
YBX3-202ENST00000279550 NPIPB5A8MRT5 1133 aa16.48■□□□□ 0.23
YBX3-202ENST00000279550 CLDN34H7C241 214 aa16.48■□□□□ 0.23
YBX3-202ENST00000279550 OR5T1Q8NG75 326 aa16.48■□□□□ 0.23
YBX3-202ENST00000279550 FANCD2OSQ96PS1 177 aa16.48■□□□□ 0.23
YBX3-202ENST00000279550 CTDSP1Q9GZU7 261 aa16.48■□□□□ 0.23
YBX3-202ENST00000279550 MEGF9Q9H1U4 602 aa16.48■□□□□ 0.23
YBX3-202ENST00000279550 TMEM242Q9NWH2 141 aa16.48■□□□□ 0.23
YBX3-202ENST00000279550 GGTLC3B5MD39 225 aa16.48■□□□□ 0.23
YBX3-202ENST00000279550 FSHBP01225 129 aa16.48■□□□□ 0.23
YBX3-202ENST00000279550 UBE2L3P68036 154 aaKnown RBP16.48■□□□□ 0.23
YBX3-202ENST00000279550 LINC00305Q7Z4B0 112 aa16.48■□□□□ 0.23
YBX3-202ENST00000279550 LINC01551Q86U37 167 aa16.48■□□□□ 0.23
YBX3-202ENST00000279550 C2CD4CQ8TF44 421 aa16.48■□□□□ 0.23
YBX3-202ENST00000279550 HSPB9Q9BQS6 159 aa16.48■□□□□ 0.23
YBX3-202ENST00000279550 SOX21Q9Y651 276 aaPredicted RBP16.48■□□□□ 0.23
YBX3-202ENST00000279550 S4R3C0 116 aa16.48■□□□□ 0.23
YBX3-202ENST00000279550 ZFHX3Q15911 3703 aa16.47■□□□□ 0.23
YBX3-202ENST00000279550 IGLV11-55A0A075B6I3 123 aa16.47■□□□□ 0.23
YBX3-202ENST00000279550 IGKV1-17P01599 117 aa16.47■□□□□ 0.23
YBX3-202ENST00000279550 TTC9CQ8N5M4 171 aa16.47■□□□□ 0.23
YBX3-202ENST00000279550 RBM14Q96PK6 669 aaKnown RBP16.47■□□□□ 0.23
YBX3-202ENST00000279550 PAXXQ9BUH6 204 aa16.47■□□□□ 0.23
YBX3-202ENST00000279550 C1orf196B1AJZ1 125 aa16.46■□□□□ 0.23
YBX3-202ENST00000279550 HLA-DRB1P01911 266 aa16.46■□□□□ 0.23
YBX3-202ENST00000279550 PSG1P11464 419 aa16.46■□□□□ 0.23
YBX3-202ENST00000279550 KRTAP1-1Q07627 177 aa16.46■□□□□ 0.23
YBX3-202ENST00000279550 OR1L6Q8NGR2 347 aa16.46■□□□□ 0.23
YBX3-202ENST00000279550 ELOA3CA0A087WX78 387 aaPredicted RBP16.45■□□□□ 0.22
YBX3-202ENST00000279550 HYPMO75409 117 aa16.45■□□□□ 0.22
YBX3-202ENST00000279550 PLP1P60201 277 aa16.45■□□□□ 0.22
YBX3-202ENST00000279550 FXYD5Q96DB9 178 aa16.45■□□□□ 0.22
YBX3-202ENST00000279550 OR51M1Q9H341 326 aa16.45■□□□□ 0.22
YBX3-202ENST00000279550 C1RLQ9NZP8 487 aa16.45■□□□□ 0.22
YBX3-202ENST00000279550 A0A1W2PRE2 83 aa16.44■□□□□ 0.22
YBX3-202ENST00000279550 SH2D7A6NKC9 451 aaPredicted RBP16.44■□□□□ 0.22
YBX3-202ENST00000279550 CD5LO43866 347 aa16.44■□□□□ 0.22
YBX3-202ENST00000279550 TSPAN9O75954 239 aa16.44■□□□□ 0.22
YBX3-202ENST00000279550 SNRPCP09234 159 aaKnown RBP16.44■□□□□ 0.22
YBX3-202ENST00000279550 CRYBB3P26998 211 aa16.44■□□□□ 0.22
YBX3-202ENST00000279550 RAB5BP61020 215 aa16.44■□□□□ 0.22
YBX3-202ENST00000279550 LYZP61626 148 aa16.44■□□□□ 0.22
YBX3-202ENST00000279550 RASL11BQ9BPW5 248 aa16.44■□□□□ 0.22
YBX3-202ENST00000279550 ELOVL1Q9BW60 279 aa16.44■□□□□ 0.22
YBX3-202ENST00000279550 FLNAP21333 2647 aaKnown RBP16.44■□□□□ 0.22
YBX3-202ENST00000279550 TEX15Q9BXT5 2789 aa16.43■□□□□ 0.22
YBX3-202ENST00000279550 H7BYZ3 331 aa16.43■□□□□ 0.22
YBX3-202ENST00000279550 HNF1AP20823 631 aa16.43■□□□□ 0.22
YBX3-202ENST00000279550 SUMO1P63165 101 aaKnown RBP16.43■□□□□ 0.22
YBX3-202ENST00000279550 NECAP1Q8NC96 275 aa16.43■□□□□ 0.22
YBX3-202ENST00000279550 PIFOQ8TCI5 191 aa16.43■□□□□ 0.22
YBX3-202ENST00000279550 NOTCH2Q04721 2471 aa16.43■□□□□ 0.22
YBX3-202ENST00000279550 NDUFB8O95169 186 aa16.42■□□□□ 0.22
YBX3-202ENST00000279550 PFN1P07737 140 aaKnown RBP16.42■□□□□ 0.22
YBX3-202ENST00000279550 RPL35P42766 123 aaKnown RBP16.42■□□□□ 0.22
YBX3-202ENST00000279550 RPS10P46783 165 aaKnown RBP16.42■□□□□ 0.22
YBX3-202ENST00000279550 LEMD1Q68G75 181 aa16.42■□□□□ 0.22
YBX3-202ENST00000279550 BCL6BQ8N143 479 aaPredicted RBP16.42■□□□□ 0.22
YBX3-202ENST00000279550 OCC1Q8TAD7 63 aa16.42■□□□□ 0.22
YBX3-202ENST00000279550 PRELID1Q9Y255 219 aa16.42■□□□□ 0.22
YBX3-202ENST00000279550 F8W735 103 aaPredicted RBP16.42■□□□□ 0.22
YBX3-202ENST00000279550 C9orf139Q6ZV77 190 aa16.42■□□□□ 0.22
YBX3-202ENST00000279550 SAV1Q9H4B6 383 aaPredicted RBP16.42■□□□□ 0.22
YBX3-202ENST00000279550 HIGD1AQ9Y241 93 aa16.42■□□□□ 0.22
YBX3-202ENST00000279550 LINC01548A6NM66 108 aa16.41■□□□□ 0.22
YBX3-202ENST00000279550 RD3LP0DJH9 198 aa16.41■□□□□ 0.22
YBX3-202ENST00000279550 TMEM219Q86XT9 240 aa16.41■□□□□ 0.22
YBX3-202ENST00000279550 CSPG4Q6UVK1 2322 aa16.41■□□□□ 0.22
YBX3-202ENST00000279550 MYO9AB2RTY4 2548 aa16.4■□□□□ 0.22
YBX3-202ENST00000279550 MDFIC2A0A1B0GVS7 189 aa16.4■□□□□ 0.22
YBX3-202ENST00000279550 K7EN84 100 aa16.4■□□□□ 0.22
YBX3-202ENST00000279550 ATP6V0E1O15342 81 aa16.4■□□□□ 0.22
YBX3-202ENST00000279550 OR2J3O76001 311 aa16.4■□□□□ 0.22
YBX3-202ENST00000279550 GP9P14770 177 aa16.4■□□□□ 0.22
YBX3-202ENST00000279550 GALR1P47211 349 aa16.4■□□□□ 0.22
YBX3-202ENST00000279550 DEFB112Q30KQ8 113 aa16.4■□□□□ 0.22
YBX3-202ENST00000279550 ZNF329Q86UD4 541 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms