RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 A0A1B0GUT8 65 aa4.8□□□□□ -1.64
VCAN-201ENST00000265077 TRIP6Q15654 476 aaKnown RBP4.8□□□□□ -1.64
VCAN-201ENST00000265077 TSKUQ8WUA8 353 aa4.8□□□□□ -1.64
VCAN-201ENST00000265077 TMEM160Q9NX00 188 aa4.8□□□□□ -1.64
VCAN-201ENST00000265077 IDI2-AS1Q9NZ38 188 aa4.8□□□□□ -1.64
VCAN-201ENST00000265077 OR9G1Q8NH87 305 aa4.8□□□□□ -1.64
VCAN-201ENST00000265077 FAM53AQ6NSI3 398 aaPredicted RBP4.8□□□□□ -1.64
VCAN-201ENST00000265077 ZNF501Q96CX3 271 aaPredicted RBP4.8□□□□□ -1.64
VCAN-201ENST00000265077 TCF19Q9Y242 345 aa4.8□□□□□ -1.64
VCAN-201ENST00000265077 PRSS12P56730 875 aa4.8□□□□□ -1.64
VCAN-201ENST00000265077 ADIPOQQ15848 244 aa4.8□□□□□ -1.64
VCAN-201ENST00000265077 SHISA5Q8N114 240 aa4.8□□□□□ -1.64
VCAN-201ENST00000265077 C18orf12Q96KH6 178 aa4.8□□□□□ -1.64
VCAN-201ENST00000265077 CRXO43186 299 aaPredicted RBP4.8□□□□□ -1.64
VCAN-201ENST00000265077 DYNLRB2Q8TF09 96 aa4.8□□□□□ -1.64
VCAN-201ENST00000265077 CACNG7P62955 275 aa4.8□□□□□ -1.64
VCAN-201ENST00000265077 GNG5P63218 68 aa4.8□□□□□ -1.64
VCAN-201ENST00000265077 PRSS53Q2L4Q9 553 aa4.8□□□□□ -1.64
VCAN-201ENST00000265077 SLC22A18ASQ8N1D0 253 aa4.8□□□□□ -1.64
VCAN-201ENST00000265077 FMC1Q96HJ9 113 aa4.8□□□□□ -1.64
VCAN-201ENST00000265077 DLL3Q9NYJ7 618 aa4.8□□□□□ -1.64
VCAN-201ENST00000265077 ERG28Q9UKR5 140 aa4.8□□□□□ -1.64
VCAN-201ENST00000265077 TM4SF5O14894 197 aa4.79□□□□□ -1.64
VCAN-201ENST00000265077 SIVA1O15304 175 aa4.79□□□□□ -1.64
VCAN-201ENST00000265077 IGLC1P0CG04 106 aa4.79□□□□□ -1.64
VCAN-201ENST00000265077 KLRD1Q13241 179 aa4.79□□□□□ -1.64
VCAN-201ENST00000265077 LINC00114Q6XXX2 140 aa4.79□□□□□ -1.64
VCAN-201ENST00000265077 ABHD17AQ96GS6 310 aa4.79□□□□□ -1.64
VCAN-201ENST00000265077 WNT9BO14905 357 aa4.79□□□□□ -1.64
VCAN-201ENST00000265077 LRTM2Q8N967 370 aa4.79□□□□□ -1.64
VCAN-201ENST00000265077 C16orf92Q96LL3 132 aa4.79□□□□□ -1.64
VCAN-201ENST00000265077 SRSF8Q9BRL6 282 aaKnown RBP4.79□□□□□ -1.64
VCAN-201ENST00000265077 RPP21Q9H633 154 aaKnown RBP4.79□□□□□ -1.64
VCAN-201ENST00000265077 PNRC2Q9NPJ4 139 aaKnown RBP4.79□□□□□ -1.64
VCAN-201ENST00000265077 A0A1W2PQF6 199 aa4.79□□□□□ -1.64
VCAN-201ENST00000265077 HIGD1CA8MV81 97 aa4.79□□□□□ -1.64
VCAN-201ENST00000265077 ARPC1AQ92747 370 aa4.79□□□□□ -1.64
VCAN-201ENST00000265077 CD55P08174 381 aa4.79□□□□□ -1.64
VCAN-201ENST00000265077 ASIPP42127 132 aa4.79□□□□□ -1.64
VCAN-201ENST00000265077 HCP5Q6MZN7 132 aa4.79□□□□□ -1.64
VCAN-201ENST00000265077 SMRP1Q8NCR6 262 aa4.79□□□□□ -1.64
VCAN-201ENST00000265077 ZNF818PQ6ZRF7 136 aa4.79□□□□□ -1.64
VCAN-201ENST00000265077 RNF183Q96D59 192 aa4.79□□□□□ -1.64
VCAN-201ENST00000265077 REG1AP05451 166 aa4.79□□□□□ -1.64
VCAN-201ENST00000265077 TMEM54Q969K7 222 aa4.79□□□□□ -1.64
VCAN-201ENST00000265077 PTH2Q96A98 100 aa4.79□□□□□ -1.64
VCAN-201ENST00000265077 VOPP1Q96AW1 172 aa4.79□□□□□ -1.64
VCAN-201ENST00000265077 C1QTNF5Q9BXJ0 243 aa4.79□□□□□ -1.64
VCAN-201ENST00000265077 CLEC7AQ9BXN2 247 aa4.79□□□□□ -1.64
VCAN-201ENST00000265077 TTTY12Q9BZ98 90 aa4.79□□□□□ -1.64
VCAN-201ENST00000265077 SCO2A0A1W2PP80 73 aa4.79□□□□□ -1.64
VCAN-201ENST00000265077 PRR33A8MZF0 331 aa4.79□□□□□ -1.64
VCAN-201ENST00000265077 MBNL2Q5VZF2 373 aaKnown RBP4.79□□□□□ -1.64
VCAN-201ENST00000265077 SRSF12Q8WXF0 261 aaKnown RBP4.79□□□□□ -1.64
VCAN-201ENST00000265077 OSTCQ9NRP0 149 aa4.79□□□□□ -1.64
VCAN-201ENST00000265077 REG1BP48304 166 aa4.79□□□□□ -1.64
VCAN-201ENST00000265077 TBR1Q16650 682 aa4.79□□□□□ -1.64
VCAN-201ENST00000265077 C2orf83Q53S99 150 aa4.79□□□□□ -1.64
VCAN-201ENST00000265077 FAM214BQ7L5A3 538 aa4.79□□□□□ -1.64
VCAN-201ENST00000265077 FAM90A27PA6NNH2 459 aa4.79□□□□□ -1.64
VCAN-201ENST00000265077 IGKV3-11P04433 115 aa4.79□□□□□ -1.64
VCAN-201ENST00000265077 RPL32P62910 135 aaKnown RBP4.79□□□□□ -1.64
VCAN-201ENST00000265077 ORMDL3Q8N138 153 aa4.79□□□□□ -1.64
VCAN-201ENST00000265077 GPR82Q96P67 336 aa4.79□□□□□ -1.64
VCAN-201ENST00000265077 ZNF688P0C7X2 276 aa4.78□□□□□ -1.64
VCAN-201ENST00000265077 SFTA2Q6UW10 78 aa4.78□□□□□ -1.64
VCAN-201ENST00000265077 VGLL1Q99990 258 aa4.78□□□□□ -1.64
VCAN-201ENST00000265077 R4GN57 208 aa4.78□□□□□ -1.64
VCAN-201ENST00000265077 IGLL1P15814 213 aa4.78□□□□□ -1.64
VCAN-201ENST00000265077 MNX1P50219 401 aaPredicted RBP4.78□□□□□ -1.64
VCAN-201ENST00000265077 C8orf86Q6ZUL3 223 aa4.78□□□□□ -1.64
VCAN-201ENST00000265077 IGHV4-34P06331 123 aa4.78□□□□□ -1.64
VCAN-201ENST00000265077 SRSF7Q16629 238 aaKnown RBP eCLIP4.78□□□□□ -1.64
VCAN-201ENST00000265077 ZNF56Q15929 161 aa4.78□□□□□ -1.64
VCAN-201ENST00000265077 RRN3P1Q2M238 152 aa4.78□□□□□ -1.64
VCAN-201ENST00000265077 FOXC2Q99958 501 aa4.78□□□□□ -1.64
VCAN-201ENST00000265077 CHD8Q9HCK8 2581 aa4.78□□□□□ -1.64
VCAN-201ENST00000265077 SMAD7O15105 426 aaKnown RBP4.78□□□□□ -1.64
VCAN-201ENST00000265077 SYNGR3O43761 229 aa4.78□□□□□ -1.64
VCAN-201ENST00000265077 PRSS2P07478 247 aa4.78□□□□□ -1.64
VCAN-201ENST00000265077 COX8AP10176 69 aa4.78□□□□□ -1.64
VCAN-201ENST00000265077 OSR1Q8TAX0 266 aaPredicted RBP4.78□□□□□ -1.64
VCAN-201ENST00000265077 SRXN1Q9BYN0 137 aa4.78□□□□□ -1.64
VCAN-201ENST00000265077 J3QRE1 110 aa4.78□□□□□ -1.64
VCAN-201ENST00000265077 CCL1P22362 96 aa4.78□□□□□ -1.64
VCAN-201ENST00000265077 GLRXP35754 106 aa4.78□□□□□ -1.64
VCAN-201ENST00000265077 DRAM1Q8N682 238 aa4.78□□□□□ -1.64
VCAN-201ENST00000265077 KIR3DL3Q8N743 410 aa4.78□□□□□ -1.64
VCAN-201ENST00000265077 V9GYY9 64 aa4.78□□□□□ -1.64
VCAN-201ENST00000265077 APELAP0DMC3 54 aa4.78□□□□□ -1.64
VCAN-201ENST00000265077 CCL4P13236 92 aa4.78□□□□□ -1.64
VCAN-201ENST00000265077 DLX6P56179 175 aa4.78□□□□□ -1.64
VCAN-201ENST00000265077 CX3CL1P78423 397 aa4.78□□□□□ -1.64
VCAN-201ENST00000265077 SLC25A53Q5H9E4 307 aa4.78□□□□□ -1.64
VCAN-201ENST00000265077 FAM90A1Q86YD7 464 aa4.78□□□□□ -1.64
VCAN-201ENST00000265077 CRISPLD2Q9H0B8 497 aa4.78□□□□□ -1.64
VCAN-201ENST00000265077 NPIPB11E5RHQ5 1161 aa4.78□□□□□ -1.64
VCAN-201ENST00000265077 UBE2L6O14933 153 aa4.78□□□□□ -1.64
VCAN-201ENST00000265077 NDUFC2O95298 119 aa4.78□□□□□ -1.64
VCAN-201ENST00000265077 DUX4L9Q6RFH8 374 aaPredicted RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms