RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 RARRES2Q99969 163 aa17.81■□□□□ 0.44
SMARCB1-201ENST00000263121 ELOA3CA0A087WX78 387 aaPredicted RBP17.8■□□□□ 0.44
SMARCB1-201ENST00000263121 DNAJC9-AS1A6NH13 148 aa17.8■□□□□ 0.44
SMARCB1-201ENST00000263121 KRBOX1C9JBD0 128 aa17.8■□□□□ 0.44
SMARCB1-201ENST00000263121 CXorf1O96002 111 aa17.8■□□□□ 0.44
SMARCB1-201ENST00000263121 TRGV3P03979 118 aa17.8■□□□□ 0.44
SMARCB1-201ENST00000263121 ARL14EPLP0DKL9 152 aa17.8■□□□□ 0.44
SMARCB1-201ENST00000263121 ZP3P21754 424 aa17.8■□□□□ 0.44
SMARCB1-201ENST00000263121 SCGB2A2Q13296 93 aa17.8■□□□□ 0.44
SMARCB1-201ENST00000263121 ZNF506Q5JVG8 444 aa17.8■□□□□ 0.44
SMARCB1-201ENST00000263121 EEF1AKMT3Q96AZ1 226 aa17.8■□□□□ 0.44
SMARCB1-201ENST00000263121 CCDC140Q96MF4 163 aa17.8■□□□□ 0.44
SMARCB1-201ENST00000263121 TRBV7-1A0A0A6YYK4 115 aa17.8■□□□□ 0.44
SMARCB1-201ENST00000263121 LOC102723971A0A1B0GUV8 181 aa17.8■□□□□ 0.44
SMARCB1-201ENST00000263121 TMEM218A2RU14 115 aa17.8■□□□□ 0.44
SMARCB1-201ENST00000263121 OR2T8A6NH00 312 aa17.8■□□□□ 0.44
SMARCB1-201ENST00000263121 CTSGP08311 255 aa17.8■□□□□ 0.44
SMARCB1-201ENST00000263121 ATP5G2Q06055 141 aa17.8■□□□□ 0.44
SMARCB1-201ENST00000263121 Q8N2B8 174 aa17.8■□□□□ 0.44
SMARCB1-201ENST00000263121 NARS2Q96I59 477 aaKnown RBP17.8■□□□□ 0.44
SMARCB1-201ENST00000263121 SMDT1Q9H4I9 107 aa17.8■□□□□ 0.44
SMARCB1-201ENST00000263121 BCL2P10415 239 aa17.79■□□□□ 0.44
SMARCB1-201ENST00000263121 ORM2P19652 201 aa17.79■□□□□ 0.44
SMARCB1-201ENST00000263121 PSMB3P49720 205 aa17.79■□□□□ 0.44
SMARCB1-201ENST00000263121 ICAM4Q14773 271 aa17.79■□□□□ 0.44
SMARCB1-201ENST00000263121 OR51G1Q8NGK1 321 aa17.79■□□□□ 0.44
SMARCB1-201ENST00000263121 OR1B1Q8NGR6 318 aa17.79■□□□□ 0.44
SMARCB1-201ENST00000263121 ATP6V0BQ99437 205 aa17.79■□□□□ 0.44
SMARCB1-201ENST00000263121 GAR1Q9NY12 217 aaKnown RBP17.79■□□□□ 0.44
SMARCB1-201ENST00000263121 TECRQ9NZ01 308 aaKnown RBP17.79■□□□□ 0.44
SMARCB1-201ENST00000263121 NOTCH2Q04721 2471 aa17.78■□□□□ 0.44
SMARCB1-201ENST00000263121 HYPMO75409 117 aa17.78■□□□□ 0.44
SMARCB1-201ENST00000263121 SCGB2A1O75556 95 aa17.78■□□□□ 0.44
SMARCB1-201ENST00000263121 ADMP35318 185 aa17.78■□□□□ 0.44
SMARCB1-201ENST00000263121 TPPP2P59282 170 aa17.78■□□□□ 0.44
SMARCB1-201ENST00000263121 KHDC3LQ587J8 217 aa17.78■□□□□ 0.44
SMARCB1-201ENST00000263121 MORN5Q5VZ52 161 aa17.78■□□□□ 0.44
SMARCB1-201ENST00000263121 UHRF2Q96PU4 802 aa17.78■□□□□ 0.44
SMARCB1-201ENST00000263121 CHRDL1Q9BU40 450 aa17.78■□□□□ 0.44
SMARCB1-201ENST00000263121 IFNA1P01562 189 aa17.77■□□□□ 0.44
SMARCB1-201ENST00000263121 IGHG4P01861 327 aa17.77■□□□□ 0.44
SMARCB1-201ENST00000263121 C8orf88P0DMB2 117 aa17.77■□□□□ 0.44
SMARCB1-201ENST00000263121 FOSL1P15407 271 aa17.77■□□□□ 0.44
SMARCB1-201ENST00000263121 GPR183P32249 361 aa17.77■□□□□ 0.44
SMARCB1-201ENST00000263121 LYZP61626 148 aa17.77■□□□□ 0.44
SMARCB1-201ENST00000263121 USMG5Q96IX5 58 aa17.77■□□□□ 0.44
SMARCB1-201ENST00000263121 FAM167A-AS1Q96KT0 104 aa17.77■□□□□ 0.44
SMARCB1-201ENST00000263121 KLK15Q9H2R5 256 aa17.77■□□□□ 0.44
SMARCB1-201ENST00000263121 ESM1Q9NQ30 184 aa17.77■□□□□ 0.44
SMARCB1-201ENST00000263121 MANBALQ9NQG1 85 aa17.77■□□□□ 0.44
SMARCB1-201ENST00000263121 SONP18583 2426 aaKnown RBP17.77■□□□□ 0.44
SMARCB1-201ENST00000263121 WI2-2373I1.2A0A1W2PRP0 233 aa17.77■□□□□ 0.43
SMARCB1-201ENST00000263121 OR2C1O95371 312 aa17.77■□□□□ 0.43
SMARCB1-201ENST00000263121 PF4V1P10720 104 aa17.77■□□□□ 0.43
SMARCB1-201ENST00000263121 GCHFRP30047 84 aa17.77■□□□□ 0.43
SMARCB1-201ENST00000263121 TAS2R45P59539 299 aa17.77■□□□□ 0.43
SMARCB1-201ENST00000263121 LINC00305Q7Z4B0 112 aa17.77■□□□□ 0.43
SMARCB1-201ENST00000263121 IQCF2Q8IXL9 164 aa17.77■□□□□ 0.43
SMARCB1-201ENST00000263121 ZNF491Q8N8L2 437 aa17.77■□□□□ 0.43
SMARCB1-201ENST00000263121 CDC42EP3Q9UKI2 254 aa17.77■□□□□ 0.43
SMARCB1-201ENST00000263121 CLDN34H7C241 214 aa17.76■□□□□ 0.43
SMARCB1-201ENST00000263121 NUPL2O15504 423 aaKnown RBP17.76■□□□□ 0.43
SMARCB1-201ENST00000263121 CLEC3BP05452 202 aa17.76■□□□□ 0.43
SMARCB1-201ENST00000263121 CD99P14209 185 aa17.76■□□□□ 0.43
SMARCB1-201ENST00000263121 SRD5A1P18405 259 aa17.76■□□□□ 0.43
SMARCB1-201ENST00000263121 PPT1P50897 306 aa17.76■□□□□ 0.43
SMARCB1-201ENST00000263121 CLEC19AQ6UXS0 136 aa17.76■□□□□ 0.43
SMARCB1-201ENST00000263121 Q8WTZ3 238 aa17.76■□□□□ 0.43
SMARCB1-201ENST00000263121 ZNF503Q96F45 646 aa17.76■□□□□ 0.43
SMARCB1-201ENST00000263121 ZNF414Q96IQ9 312 aa17.76■□□□□ 0.43
SMARCB1-201ENST00000263121 SLC25A2Q9BXI2 301 aa17.76■□□□□ 0.43
SMARCB1-201ENST00000263121 MRPL27Q9P0M9 148 aaKnown RBP17.76■□□□□ 0.43
SMARCB1-201ENST00000263121 TMEM89A2RUT3 159 aa17.75■□□□□ 0.43
SMARCB1-201ENST00000263121 HSPB1P04792 205 aaKnown RBP17.75■□□□□ 0.43
SMARCB1-201ENST00000263121 SFTA3P0C7M3 94 aa17.75■□□□□ 0.43
SMARCB1-201ENST00000263121 ADCYAP1P18509 176 aa17.75■□□□□ 0.43
SMARCB1-201ENST00000263121 PQLC2Q6ZP29 291 aa17.75■□□□□ 0.43
SMARCB1-201ENST00000263121 RXFP4Q8TDU9 374 aa17.75■□□□□ 0.43
SMARCB1-201ENST00000263121 RNF125Q96EQ8 232 aa17.75■□□□□ 0.43
SMARCB1-201ENST00000263121 VAX2Q9UIW0 290 aa17.75■□□□□ 0.43
SMARCB1-201ENST00000263121 HIGD1AQ9Y241 93 aa17.75■□□□□ 0.43
SMARCB1-201ENST00000263121 TRAV5A0A0B4J249 113 aa17.74■□□□□ 0.43
SMARCB1-201ENST00000263121 IL4P05112 153 aa17.74■□□□□ 0.43
SMARCB1-201ENST00000263121 PSMB8P28062 276 aa17.74■□□□□ 0.43
SMARCB1-201ENST00000263121 TAGLN2P37802 199 aaKnown RBP17.74■□□□□ 0.43
SMARCB1-201ENST00000263121 RAB9AP51151 201 aa17.74■□□□□ 0.43
SMARCB1-201ENST00000263121 ZNF329Q86UD4 541 aa17.74■□□□□ 0.43
SMARCB1-201ENST00000263121 TGOLN2O43493 480 aa17.74■□□□□ 0.43
SMARCB1-201ENST00000263121 SRP19P09132 144 aaKnown RBP17.73■□□□□ 0.43
SMARCB1-201ENST00000263121 C10orf91Q5T1B1 145 aa17.73■□□□□ 0.43
SMARCB1-201ENST00000263121 ZNF600Q6ZNG1 722 aa17.73■□□□□ 0.43
SMARCB1-201ENST00000263121 OR5AU1Q8NGC0 362 aa17.73■□□□□ 0.43
SMARCB1-201ENST00000263121 SLC35B3Q9H1N7 401 aa17.73■□□□□ 0.43
SMARCB1-201ENST00000263121 A0A0G2JLM5 398 aa17.72■□□□□ 0.43
SMARCB1-201ENST00000263121 FAM181BA6NEQ2 426 aa17.72■□□□□ 0.43
SMARCB1-201ENST00000263121 OR7C2O60412 319 aa17.72■□□□□ 0.43
SMARCB1-201ENST00000263121 PAGE4O60829 102 aa17.72■□□□□ 0.43
SMARCB1-201ENST00000263121 USF2Q15853 346 aaPredicted RBP17.72■□□□□ 0.43
SMARCB1-201ENST00000263121 C10orf99Q6UWK7 81 aa17.72■□□□□ 0.43
SMARCB1-201ENST00000263121 LCNL1Q6ZST4 164 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms