RNA–Protein interactions for RNA: ENST00000262795.5

SHANK3-201, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS P5 TSL 5 BASIC

Gene SHANK3, Length 7,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-201ENST00000262795 SLC25A38Q96DW6 304 aa13.09□□□□□ -0.31
SHANK3-201ENST00000262795 IGHV1-3A0A0C4DH29 117 aa13.09□□□□□ -0.31
SHANK3-201ENST00000262795 TRBV5-3A0A0A0MS03 114 aa13.09□□□□□ -0.31
SHANK3-201ENST00000262795 LINC01619G3V211 115 aa13.09□□□□□ -0.31
SHANK3-201ENST00000262795 IGHV1-8P0DP01 117 aa13.09□□□□□ -0.31
SHANK3-201ENST00000262795 UCP3P55916 312 aa13.09□□□□□ -0.31
SHANK3-201ENST00000262795 SCN10AQ9Y5Y9 1956 aa13.09□□□□□ -0.31
SHANK3-201ENST00000262795 SLC17A3O00476 420 aa13.09□□□□□ -0.31
SHANK3-201ENST00000262795 LAIR2Q6ISS4 152 aa13.08□□□□□ -0.32
SHANK3-201ENST00000262795 FAM19A2Q8N3H0 131 aa13.08□□□□□ -0.32
SHANK3-201ENST00000262795 HLA-DQA1P01909 254 aa13.08□□□□□ -0.32
SHANK3-201ENST00000262795 VAX1Q5SQQ9 334 aa13.08□□□□□ -0.32
SHANK3-201ENST00000262795 PMCHL2Q9BQD1 86 aa13.08□□□□□ -0.32
SHANK3-201ENST00000262795 PLSCR4Q9NRQ2 329 aa13.08□□□□□ -0.32
SHANK3-201ENST00000262795 SBF2Q86WG5 1849 aa13.08□□□□□ -0.32
SHANK3-201ENST00000262795 IGLV3-21P80748 117 aaPredicted RBP13.08□□□□□ -0.32
SHANK3-201ENST00000262795 GATD1Q8NB37 220 aa13.08□□□□□ -0.32
SHANK3-201ENST00000262795 IL18BPO95998 194 aa13.08□□□□□ -0.32
SHANK3-201ENST00000262795 APOHP02749 345 aaPredicted RBP13.08□□□□□ -0.32
SHANK3-201ENST00000262795 PRTN3P24158 256 aa13.08□□□□□ -0.32
SHANK3-201ENST00000262795 ZNF124Q15973 351 aa13.08□□□□□ -0.32
SHANK3-201ENST00000262795 CLPSL2Q6UWE3 100 aa13.08□□□□□ -0.32
SHANK3-201ENST00000262795 GLRX5Q86SX6 157 aa13.08□□□□□ -0.32
SHANK3-201ENST00000262795 Q9HAA7 133 aa13.08□□□□□ -0.32
SHANK3-201ENST00000262795 TICRRQ7Z2Z1 1910 aa13.08□□□□□ -0.32
SHANK3-201ENST00000262795 SRRM4A7MD48 611 aaKnown RBP13.07□□□□□ -0.32
SHANK3-201ENST00000262795 PYYP10082 97 aa13.07□□□□□ -0.32
SHANK3-201ENST00000262795 PAX2Q02962 417 aa13.07□□□□□ -0.32
SHANK3-201ENST00000262795 C5orf66Q9H5L9 145 aa13.07□□□□□ -0.32
SHANK3-201ENST00000262795 EFNA2O43921 213 aa13.07□□□□□ -0.32
SHANK3-201ENST00000262795 EIF4EBP2Q13542 120 aaPredicted RBP13.07□□□□□ -0.32
SHANK3-201ENST00000262795 TP53BP1Q12888 1972 aaPredicted RBP13.07□□□□□ -0.32
SHANK3-201ENST00000262795 FANCMQ8IYD8 2048 aa13.07□□□□□ -0.32
SHANK3-201ENST00000262795 PAX9P55771 341 aa13.07□□□□□ -0.32
SHANK3-201ENST00000262795 TMEM187Q14656 261 aa13.07□□□□□ -0.32
SHANK3-201ENST00000262795 NABP1Q96AH0 204 aa13.07□□□□□ -0.32
SHANK3-201ENST00000262795 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.07□□□□□ -0.32
SHANK3-201ENST00000262795 MRPS18CQ9Y3D5 142 aaKnown RBP13.07□□□□□ -0.32
SHANK3-201ENST00000262795 DPRXA6NFQ7 191 aa13.06□□□□□ -0.32
SHANK3-201ENST00000262795 KNCNA6PVL3 124 aa13.06□□□□□ -0.32
SHANK3-201ENST00000262795 GREB1Q4ZG55 1949 aa13.06□□□□□ -0.32
SHANK3-201ENST00000262795 UPK2O00526 184 aa13.06□□□□□ -0.32
SHANK3-201ENST00000262795 OR11H1Q8NG94 326 aa13.06□□□□□ -0.32
SHANK3-201ENST00000262795 NPIPB13A6NJU9 1138 aa13.06□□□□□ -0.32
SHANK3-201ENST00000262795 NPIPB5A8MRT5 1133 aa13.06□□□□□ -0.32
SHANK3-201ENST00000262795 WBP1Q96G27 269 aa13.06□□□□□ -0.32
SHANK3-201ENST00000262795 NPCDR1Q9BY65 106 aa13.06□□□□□ -0.32
SHANK3-201ENST00000262795 TRAV2A0A0B4J234 112 aa13.06□□□□□ -0.32
SHANK3-201ENST00000262795 SSBP2P81877 361 aaPredicted RBP13.06□□□□□ -0.32
SHANK3-201ENST00000262795 ZFAND6Q6FIF0 208 aa13.06□□□□□ -0.32
SHANK3-201ENST00000262795 SMDT1Q9H4I9 107 aa13.06□□□□□ -0.32
SHANK3-201ENST00000262795 SPTBN2O15020 2390 aa13.05□□□□□ -0.32
SHANK3-201ENST00000262795 TRBV5-5A0A0J9YX44 114 aa13.05□□□□□ -0.32
SHANK3-201ENST00000262795 APOC4P55056 127 aa13.05□□□□□ -0.32
SHANK3-201ENST00000262795 SLC25A15Q9Y619 301 aa13.05□□□□□ -0.32
SHANK3-201ENST00000262795 DIDO1Q9BTC0 2240 aaKnown RBP13.05□□□□□ -0.32
SHANK3-201ENST00000262795 GZMBP10144 247 aa13.05□□□□□ -0.32
SHANK3-201ENST00000262795 F8WEM9 126 aa13.05□□□□□ -0.32
SHANK3-201ENST00000262795 FMC1Q96HJ9 113 aa13.05□□□□□ -0.32
SHANK3-201ENST00000262795 GTSF1LQ9H1H1 148 aa13.05□□□□□ -0.32
SHANK3-201ENST00000262795 OVOL3O00110 214 aa13.05□□□□□ -0.32
SHANK3-201ENST00000262795 NAA38Q9BRA0 125 aaKnown RBP13.05□□□□□ -0.32
SHANK3-201ENST00000262795 CD55P08174 381 aa13.05□□□□□ -0.32
SHANK3-201ENST00000262795 SMIM8Q96KF7 97 aa13.05□□□□□ -0.32
SHANK3-201ENST00000262795 C19orf24Q9BVV8 132 aa13.05□□□□□ -0.32
SHANK3-201ENST00000262795 DOCK9Q9BZ29 2069 aa13.05□□□□□ -0.32
SHANK3-201ENST00000262795 RPL32P62910 135 aaKnown RBP13.04□□□□□ -0.32
SHANK3-201ENST00000262795 OCIAD2Q56VL3 154 aa13.04□□□□□ -0.32
SHANK3-201ENST00000262795 RSPO3Q9BXY4 272 aaPredicted RBP13.04□□□□□ -0.32
SHANK3-201ENST00000262795 FBLIM1Q8WUP2 373 aa13.04□□□□□ -0.32
SHANK3-201ENST00000262795 RPUSD1Q9UJJ7 312 aaKnown RBP13.04□□□□□ -0.32
SHANK3-201ENST00000262795 DANCRP0C864 163 aa13.04□□□□□ -0.32
SHANK3-201ENST00000262795 PRCDQ00LT1 54 aa13.04□□□□□ -0.32
SHANK3-201ENST00000262795 C1orf159Q96HA4 380 aa13.04□□□□□ -0.32
SHANK3-201ENST00000262795 GAGE12BA1L429 117 aa13.04□□□□□ -0.32
SHANK3-201ENST00000262795 GAGE7O76087 117 aa13.04□□□□□ -0.32
SHANK3-201ENST00000262795 GAGE12FP0CL80 117 aa13.04□□□□□ -0.32
SHANK3-201ENST00000262795 GAGE12GP0CL81 117 aa13.04□□□□□ -0.32
SHANK3-201ENST00000262795 GAGE12IP0CL82 117 aa13.04□□□□□ -0.32
SHANK3-201ENST00000262795 ZNF414Q96IQ9 312 aa13.04□□□□□ -0.32
SHANK3-201ENST00000262795 A0A0J9YY99 117 aa13.04□□□□□ -0.32
SHANK3-201ENST00000262795 HBDP02042 147 aa13.04□□□□□ -0.32
SHANK3-201ENST00000262795 CACNA1EQ15878 2313 aa13.04□□□□□ -0.32
SHANK3-201ENST00000262795 TRAV13-1A0A0B4J241 112 aa13.03□□□□□ -0.32
SHANK3-201ENST00000262795 FABP5P3A8MUU1 101 aa13.03□□□□□ -0.32
SHANK3-201ENST00000262795 C22orf46C9J442 243 aa13.03□□□□□ -0.32
SHANK3-201ENST00000262795 Q6ZS92 163 aa13.03□□□□□ -0.32
SHANK3-201ENST00000262795 MRPS18AQ9NVS2 196 aaKnown RBP13.03□□□□□ -0.32
SHANK3-201ENST00000262795 ZNRD1Q9P1U0 126 aa13.03□□□□□ -0.32
SHANK3-201ENST00000262795 ZNF561-AS1K7EIQ3 104 aa13.03□□□□□ -0.32
SHANK3-201ENST00000262795 PAX4O43316 350 aa13.03□□□□□ -0.32
SHANK3-201ENST00000262795 C1QTNF4Q9BXJ3 329 aa13.03□□□□□ -0.32
SHANK3-201ENST00000262795 OVOL1O14753 267 aa13.03□□□□□ -0.32
SHANK3-201ENST00000262795 TMEM256Q8N2U0 113 aa13.03□□□□□ -0.32
SHANK3-201ENST00000262795 SLC50A1Q9BRV3 221 aa13.03□□□□□ -0.32
SHANK3-201ENST00000262795 ZNF257Q9Y2Q1 563 aa13.03□□□□□ -0.32
SHANK3-201ENST00000262795 SDK2Q58EX2 2172 aa13.03□□□□□ -0.32
SHANK3-201ENST00000262795 CACNA1IQ9P0X4 2223 aa13.03□□□□□ -0.32
SHANK3-201ENST00000262795 ZNF876PQ49A33 203 aa13.03□□□□□ -0.32
SHANK3-201ENST00000262795 NHP2Q9NX24 153 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms