RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 GSX1Q9H4S2 264 aaPredicted RBP14.06□□□□□ -0.16
TRAM1-201ENST00000262213 ZNF835Q9Y2P0 537 aa14.06□□□□□ -0.16
TRAM1-201ENST00000262213 TPRP12270 2363 aaKnown RBP14.06□□□□□ -0.16
TRAM1-201ENST00000262213 HBBP68871 147 aa14.05□□□□□ -0.16
TRAM1-201ENST00000262213 RITA1Q96K30 269 aa14.05□□□□□ -0.16
TRAM1-201ENST00000262213 NCOR1P1Q9H4R4 102 aa14.05□□□□□ -0.16
TRAM1-201ENST00000262213 C7orf69Q9H7B7 122 aa14.05□□□□□ -0.16
TRAM1-201ENST00000262213 ATP5IP56385 69 aaPredicted RBP14.05□□□□□ -0.16
TRAM1-201ENST00000262213 PRB3Q04118 309 aaPredicted RBP14.05□□□□□ -0.16
TRAM1-201ENST00000262213 VAMP3Q15836 100 aa14.05□□□□□ -0.16
TRAM1-201ENST00000262213 MPV17L2Q567V2 206 aa14.05□□□□□ -0.16
TRAM1-201ENST00000262213 TIMM23BQ5SRD1 257 aa14.05□□□□□ -0.16
TRAM1-201ENST00000262213 PMCHL2Q9BQD1 86 aa14.05□□□□□ -0.16
TRAM1-201ENST00000262213 RPP21Q9H633 154 aaKnown RBP14.05□□□□□ -0.16
TRAM1-201ENST00000262213 IGLV3-9A0A075B6K5 115 aa14.05□□□□□ -0.16
TRAM1-201ENST00000262213 IGLC7A0M8Q6 106 aa14.05□□□□□ -0.16
TRAM1-201ENST00000262213 NKX6-3A6NJ46 265 aa14.05□□□□□ -0.16
TRAM1-201ENST00000262213 OR2J3O76001 311 aa14.05□□□□□ -0.16
TRAM1-201ENST00000262213 CSN3P07498 182 aa14.05□□□□□ -0.16
TRAM1-201ENST00000262213 FAM87AP0C7U9 286 aa14.05□□□□□ -0.16
TRAM1-201ENST00000262213 FAM27E3Q08E93 113 aa14.05□□□□□ -0.16
TRAM1-201ENST00000262213 GTSF1Q8WW33 167 aa14.05□□□□□ -0.16
TRAM1-201ENST00000262213 ASCL2Q99929 193 aa14.05□□□□□ -0.16
TRAM1-201ENST00000262213 C22orf46C9J442 243 aa14.04□□□□□ -0.16
TRAM1-201ENST00000262213 P01737 135 aa14.04□□□□□ -0.16
TRAM1-201ENST00000262213 TNFSF4P23510 183 aa14.04□□□□□ -0.16
TRAM1-201ENST00000262213 GATA4P43694 442 aa14.04□□□□□ -0.16
TRAM1-201ENST00000262213 RNF151Q2KHN1 245 aa14.04□□□□□ -0.16
TRAM1-201ENST00000262213 Q71RC1 249 aaPredicted RBP14.04□□□□□ -0.16
TRAM1-201ENST00000262213 CHRDL1Q9BU40 450 aa14.04□□□□□ -0.16
TRAM1-201ENST00000262213 WASHC3Q9Y3C0 194 aa14.04□□□□□ -0.16
TRAM1-201ENST00000262213 TRAV8-1A0A0A6YYK1 113 aa14.04□□□□□ -0.16
TRAM1-201ENST00000262213 A0A1B0GXF2 115 aa14.04□□□□□ -0.16
TRAM1-201ENST00000262213 TM4SF5O14894 197 aa14.04□□□□□ -0.16
TRAM1-201ENST00000262213 FSTL3O95633 263 aa14.04□□□□□ -0.16
TRAM1-201ENST00000262213 NBEAP1P0C6P0 100 aa14.04□□□□□ -0.16
TRAM1-201ENST00000262213 SUB1P53999 127 aaKnown RBP eCLIP14.04□□□□□ -0.16
TRAM1-201ENST00000262213 OR4C5Q8NGB2 326 aa14.04□□□□□ -0.16
TRAM1-201ENST00000262213 GPR82Q96P67 336 aa14.04□□□□□ -0.16
TRAM1-201ENST00000262213 GAL3ST2Q9H3Q3 398 aa14.04□□□□□ -0.16
TRAM1-201ENST00000262213 LINC00312Q9Y6C7 94 aa14.04□□□□□ -0.16
TRAM1-201ENST00000262213 LAMA5O15230 3695 aa14.03□□□□□ -0.16
TRAM1-201ENST00000262213 BDP1A6H8Y1 2624 aa14.03□□□□□ -0.16
TRAM1-201ENST00000262213 IGHV1-24A0A0C4DH33 117 aa14.03□□□□□ -0.16
TRAM1-201ENST00000262213 FBLN7Q53RD9 439 aa14.03□□□□□ -0.16
TRAM1-201ENST00000262213 MUC15Q8N387 334 aa14.03□□□□□ -0.16
TRAM1-201ENST00000262213 DAZAP1Q96EP5 407 aaKnown RBP14.03□□□□□ -0.16
TRAM1-201ENST00000262213 IGHV1-69-2A0A0G2JMI3 117 aa14.03□□□□□ -0.16
TRAM1-201ENST00000262213 A0A1W2PPI3 338 aa14.03□□□□□ -0.16
TRAM1-201ENST00000262213 LEPROTL1O95214 131 aa14.03□□□□□ -0.16
TRAM1-201ENST00000262213 FAM120AOSQ5T036 256 aa14.03□□□□□ -0.16
TRAM1-201ENST00000262213 OR5AN1Q8NGI8 311 aa14.03□□□□□ -0.16
TRAM1-201ENST00000262213 OR4C13Q8NGP0 309 aa14.03□□□□□ -0.16
TRAM1-201ENST00000262213 PERPQ96FX8 193 aa14.03□□□□□ -0.16
TRAM1-201ENST00000262213 TMEM200BQ69YZ2 307 aa14.02□□□□□ -0.16
TRAM1-201ENST00000262213 TMEM167AQ8TBQ9 72 aa14.02□□□□□ -0.16
TRAM1-201ENST00000262213 LOXL4Q96JB6 756 aa14.02□□□□□ -0.16
TRAM1-201ENST00000262213 RNF24Q9Y225 148 aa14.02□□□□□ -0.16
TRAM1-201ENST00000262213 DLX1P56177 255 aa14.02□□□□□ -0.17
TRAM1-201ENST00000262213 FAM169BQ8N8A8 192 aa14.02□□□□□ -0.17
TRAM1-201ENST00000262213 LOC105371242A0A075B767 164 aa14.01□□□□□ -0.17
TRAM1-201ENST00000262213 A8MWL6 223 aa14.01□□□□□ -0.17
TRAM1-201ENST00000262213 CHEK1O14757 476 aa14.01□□□□□ -0.17
TRAM1-201ENST00000262213 NUDT3O95989 172 aa14.01□□□□□ -0.17
TRAM1-201ENST00000262213 CEACAM8P31997 349 aaPredicted RBP14.01□□□□□ -0.17
TRAM1-201ENST00000262213 MYCNOSP40205 109 aa14.01□□□□□ -0.17
TRAM1-201ENST00000262213 CBY3A6NI87 242 aa14.01□□□□□ -0.17
TRAM1-201ENST00000262213 SYS1-DBNDD2H3BUS1 97 aa14.01□□□□□ -0.17
TRAM1-201ENST00000262213 FCN3O75636 299 aa14.01□□□□□ -0.17
TRAM1-201ENST00000262213 TOMM40O96008 361 aa14.01□□□□□ -0.17
TRAM1-201ENST00000262213 ATP5L2Q7Z4Y8 100 aa14.01□□□□□ -0.17
TRAM1-201ENST00000262213 CIARTQ8N365 385 aaPredicted RBP14.01□□□□□ -0.17
TRAM1-201ENST00000262213 LINC00574Q9H8X3 128 aa14.01□□□□□ -0.17
TRAM1-201ENST00000262213 MBD3L4A6NDZ8 208 aaPredicted RBP14□□□□□ -0.17
TRAM1-201ENST00000262213 MBD3L3A6NE82 208 aaPredicted RBP14□□□□□ -0.17
TRAM1-201ENST00000262213 MBD3L5A6NJ08 208 aaPredicted RBP14□□□□□ -0.17
TRAM1-201ENST00000262213 RBX1P62877 108 aa14□□□□□ -0.17
TRAM1-201ENST00000262213 PLA2G2CQ5R387 149 aa14□□□□□ -0.17
TRAM1-201ENST00000262213 MBD3L2Q8NHZ7 208 aaPredicted RBP14□□□□□ -0.17
TRAM1-201ENST00000262213 Q9H3A6 140 aa14□□□□□ -0.17
TRAM1-201ENST00000262213 FAM215AQ9Y5M1 114 aa14□□□□□ -0.17
TRAM1-201ENST00000262213 POLEQ07864 2286 aa14□□□□□ -0.17
TRAM1-201ENST00000262213 MGAQ8IWI9 3026 aa14□□□□□ -0.17
TRAM1-201ENST00000262213 IGLV2-23P01705 113 aa14□□□□□ -0.17
TRAM1-201ENST00000262213 LYPD2Q6UXB3 125 aa14□□□□□ -0.17
TRAM1-201ENST00000262213 THAP8Q8NA92 274 aa14□□□□□ -0.17
TRAM1-201ENST00000262213 VSTM2AQ8TAG5 236 aa14□□□□□ -0.17
TRAM1-201ENST00000262213 CCL17Q92583 94 aa14□□□□□ -0.17
TRAM1-201ENST00000262213 GVINP1Q7Z2Y8 2422 aa13.99□□□□□ -0.17
TRAM1-201ENST00000262213 PRNTQ86SH4 94 aa13.99□□□□□ -0.17
TRAM1-201ENST00000262213 C22orf15Q8WYQ4 148 aa13.99□□□□□ -0.17
TRAM1-201ENST00000262213 CD40P25942 277 aa13.99□□□□□ -0.17
TRAM1-201ENST00000262213 COL8A1P27658 744 aa13.99□□□□□ -0.17
TRAM1-201ENST00000262213 SNAI2O43623 268 aa13.98□□□□□ -0.17
TRAM1-201ENST00000262213 TCRAP04437 139 aa13.98□□□□□ -0.17
TRAM1-201ENST00000262213 CNTFRP26992 372 aa13.98□□□□□ -0.17
TRAM1-201ENST00000262213 LYZP61626 148 aa13.98□□□□□ -0.17
TRAM1-201ENST00000262213 EXOC3-AS1Q8N2X6 119 aa13.98□□□□□ -0.17
TRAM1-201ENST00000262213 MLST8Q9BVC4 326 aa13.98□□□□□ -0.17
TRAM1-201ENST00000262213 ZNF318Q5VUA4 2279 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms