RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 NDUFB8O95169 186 aa14.22□□□□□ -0.13
VIM-201ENST00000224237 IGKV1-17P01599 117 aa14.22□□□□□ -0.13
VIM-201ENST00000224237 IGHG2P01859 326 aa14.22□□□□□ -0.13
VIM-201ENST00000224237 IER3P46695 156 aa14.22□□□□□ -0.13
VIM-201ENST00000224237 CEBPGP53567 150 aa14.22□□□□□ -0.13
VIM-201ENST00000224237 CD81P60033 236 aa14.22□□□□□ -0.13
VIM-201ENST00000224237 NOTCH2Q04721 2471 aa14.22□□□□□ -0.13
VIM-201ENST00000224237 TIGITQ495A1 244 aa14.22□□□□□ -0.13
VIM-201ENST00000224237 AWAT1Q58HT5 328 aa14.22□□□□□ -0.13
VIM-201ENST00000224237 FBXL7Q9UJT9 491 aa14.22□□□□□ -0.13
VIM-201ENST00000224237 MXRA5Q9NR99 2828 aa14.21□□□□□ -0.13
VIM-201ENST00000224237 TRAV41A0A0B4J266 112 aa14.21□□□□□ -0.13
VIM-201ENST00000224237 M0R036 132 aa14.21□□□□□ -0.13
VIM-201ENST00000224237 IGHV4-59P01825 116 aa14.21□□□□□ -0.13
VIM-201ENST00000224237 IGF1P05019 195 aa14.21□□□□□ -0.13
VIM-201ENST00000224237 PSG1P11464 419 aa14.21□□□□□ -0.13
VIM-201ENST00000224237 ORM2P19652 201 aa14.21□□□□□ -0.13
VIM-201ENST00000224237 PATE2Q6UY27 113 aa14.21□□□□□ -0.13
VIM-201ENST00000224237 TEX29Q8N6K0 151 aa14.21□□□□□ -0.13
VIM-201ENST00000224237 C15orf54Q8N8G6 183 aa14.21□□□□□ -0.13
VIM-201ENST00000224237 OR1B1Q8NGR6 318 aa14.21□□□□□ -0.13
VIM-201ENST00000224237 VN1R17PQ8TDU5 208 aa14.21□□□□□ -0.13
VIM-201ENST00000224237 TXNDC17Q9BRA2 123 aa14.21□□□□□ -0.13
VIM-201ENST00000224237 TMEM167BQ9NRX6 74 aa14.21□□□□□ -0.13
VIM-201ENST00000224237 ACANP16112 2415 aa14.21□□□□□ -0.13
VIM-201ENST00000224237 TRBV9A0A0B4J1U6 114 aa14.21□□□□□ -0.14
VIM-201ENST00000224237 OR7C2O60412 319 aa14.21□□□□□ -0.14
VIM-201ENST00000224237 SCGB2A1O75556 95 aa14.21□□□□□ -0.14
VIM-201ENST00000224237 FCGR2BP31994 310 aaPredicted RBP14.21□□□□□ -0.14
VIM-201ENST00000224237 Q56UQ5 140 aa14.21□□□□□ -0.14
VIM-201ENST00000224237 C19orf54Q5BKX5 351 aa14.21□□□□□ -0.14
VIM-201ENST00000224237 TXN2Q99757 166 aa14.21□□□□□ -0.14
VIM-201ENST00000224237 ZNF355PQ9NSJ1 428 aa14.21□□□□□ -0.14
VIM-201ENST00000224237 MYO9AB2RTY4 2548 aa14.2□□□□□ -0.14
VIM-201ENST00000224237 C11orf94C9JXX5 98 aa14.2□□□□□ -0.14
VIM-201ENST00000224237 TMEM250H0YL14 139 aa14.2□□□□□ -0.14
VIM-201ENST00000224237 TOMM40O96008 361 aa14.2□□□□□ -0.14
VIM-201ENST00000224237 RD3LP0DJH9 198 aa14.2□□□□□ -0.14
VIM-201ENST00000224237 FLI1Q01543 452 aaPredicted RBP14.2□□□□□ -0.14
VIM-201ENST00000224237 LINC00305Q7Z4B0 112 aa14.2□□□□□ -0.14
VIM-201ENST00000224237 UHRF2Q96PU4 802 aa14.2□□□□□ -0.14
VIM-201ENST00000224237 S4R3C0 116 aa14.2□□□□□ -0.14
VIM-201ENST00000224237 COLCA2A8K830 154 aa14.19□□□□□ -0.14
VIM-201ENST00000224237 F8W735 103 aaPredicted RBP14.19□□□□□ -0.14
VIM-201ENST00000224237 HYPMO75409 117 aa14.19□□□□□ -0.14
VIM-201ENST00000224237 UBE2G2P60604 165 aa14.19□□□□□ -0.14
VIM-201ENST00000224237 C15orf32Q32M92 178 aa14.19□□□□□ -0.14
VIM-201ENST00000224237 FAM90A2PQ658T7 463 aa14.19□□□□□ -0.14
VIM-201ENST00000224237 NECAP1Q8NC96 275 aa14.19□□□□□ -0.14
VIM-201ENST00000224237 OR51G1Q8NGK1 321 aa14.19□□□□□ -0.14
VIM-201ENST00000224237 OR4F5Q8NH21 305 aa14.19□□□□□ -0.14
VIM-201ENST00000224237 OR4F4Q96R69 305 aa14.19□□□□□ -0.14
VIM-201ENST00000224237 SLC25A2Q9BXI2 301 aa14.19□□□□□ -0.14
VIM-201ENST00000224237 ARL2-SNX15V9GYD0 113 aa14.19□□□□□ -0.14
VIM-201ENST00000224237 SONP18583 2426 aaKnown RBP14.19□□□□□ -0.14
VIM-201ENST00000224237 YPEL3P61236 119 aaPredicted RBP14.18□□□□□ -0.14
VIM-201ENST00000224237 LYZP61626 148 aa14.18□□□□□ -0.14
VIM-201ENST00000224237 RHOGP84095 191 aa14.18□□□□□ -0.14
VIM-201ENST00000224237 MORN5Q5VZ52 161 aa14.18□□□□□ -0.14
VIM-201ENST00000224237 CST9LP1Q5W188 147 aa14.18□□□□□ -0.14
VIM-201ENST00000224237 Q6YL49 198 aa14.18□□□□□ -0.14
VIM-201ENST00000224237 IL17RELQ6ZVW7 336 aa14.18□□□□□ -0.14
VIM-201ENST00000224237 OR5AU1Q8NGC0 362 aa14.18□□□□□ -0.14
VIM-201ENST00000224237 ZNF503Q96F45 646 aa14.18□□□□□ -0.14
VIM-201ENST00000224237 FAM167A-AS1Q96KT0 104 aa14.18□□□□□ -0.14
VIM-201ENST00000224237 PDE6DO43924 150 aa14.18□□□□□ -0.14
VIM-201ENST00000224237 BLCAPP62952 87 aa14.18□□□□□ -0.14
VIM-201ENST00000224237 NIPSNAP3BQ9BS92 247 aa14.18□□□□□ -0.14
VIM-201ENST00000224237 PUS1Q9Y606 427 aaKnown RBP eCLIP14.18□□□□□ -0.14
VIM-201ENST00000224237 AP4M1O00189 453 aa14.17□□□□□ -0.14
VIM-201ENST00000224237 STXBP6Q8NFX7 210 aa14.17□□□□□ -0.14
VIM-201ENST00000224237 PRDM13Q9H4Q3 707 aa14.17□□□□□ -0.14
VIM-201ENST00000224237 MLXQ9UH92 298 aa14.17□□□□□ -0.14
VIM-201ENST00000224237 VPREB3Q9UKI3 123 aa14.17□□□□□ -0.14
VIM-201ENST00000224237 HIGD1AQ9Y241 93 aa14.17□□□□□ -0.14
VIM-201ENST00000224237 TRAV5A0A0B4J249 113 aa14.16□□□□□ -0.14
VIM-201ENST00000224237 H3BQ15 152 aa14.16□□□□□ -0.14
VIM-201ENST00000224237 ATP5G3P48201 142 aa14.16□□□□□ -0.14
VIM-201ENST00000224237 KRTAP1-1Q07627 177 aa14.16□□□□□ -0.14
VIM-201ENST00000224237 RNF212Q495C1 297 aa14.16□□□□□ -0.14
VIM-201ENST00000224237 GAR1Q9NY12 217 aaKnown RBP14.16□□□□□ -0.14
VIM-201ENST00000224237 LINC00527Q9UJ94 153 aa14.16□□□□□ -0.14
VIM-201ENST00000224237 IGHV3-23P01764 117 aa14.16□□□□□ -0.14
VIM-201ENST00000224237 FOLR2P14207 255 aa14.16□□□□□ -0.14
VIM-201ENST00000224237 SMUG1Q53HV7 270 aa14.16□□□□□ -0.14
VIM-201ENST00000224237 ZNF502Q8TBZ5 544 aa14.16□□□□□ -0.14
VIM-201ENST00000224237 C20orf24Q9BUV8 137 aa14.16□□□□□ -0.14
VIM-201ENST00000224237 ZNF580Q9UK33 172 aa14.16□□□□□ -0.14
VIM-201ENST00000224237 OR2T8A6NH00 312 aa14.15□□□□□ -0.14
VIM-201ENST00000224237 FAM223BA6NKX1 122 aa14.15□□□□□ -0.14
VIM-201ENST00000224237 F6UZH7 168 aa14.15□□□□□ -0.14
VIM-201ENST00000224237 H3BUA1 57 aa14.15□□□□□ -0.14
VIM-201ENST00000224237 BRI3O95415 125 aa14.15□□□□□ -0.14
VIM-201ENST00000224237 MT-ND4LP03901 98 aa14.15□□□□□ -0.14
VIM-201ENST00000224237 OR10J4P0C629 311 aa14.15□□□□□ -0.14
VIM-201ENST00000224237 UBE2L3P68036 154 aaKnown RBP14.15□□□□□ -0.14
VIM-201ENST00000224237 KIAA0141Q14154 515 aaPredicted RBP14.15□□□□□ -0.14
VIM-201ENST00000224237 FAM223AQ8IWN6 122 aa14.15□□□□□ -0.14
VIM-201ENST00000224237 ZNF491Q8N8L2 437 aa14.15□□□□□ -0.14
VIM-201ENST00000224237 Q8WTZ3 238 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms