RNA–Protein interactions for RNA: ENST00000199706.12

MRPL28-201, Transcript of mitochondrial ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL28, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-201ENST00000199706 C2orf50Q96LR7 162 aa12.98□□□□□ -0.33
MRPL28-201ENST00000199706 ASCL2Q99929 193 aa12.98□□□□□ -0.33
MRPL28-201ENST00000199706 SPATA25Q9BR10 227 aa12.98□□□□□ -0.33
MRPL28-201ENST00000199706 PFDN2Q9UHV9 154 aa12.98□□□□□ -0.33
MRPL28-201ENST00000199706 IGKV1OR2-108A0A075B7D4 117 aa12.97□□□□□ -0.33
MRPL28-201ENST00000199706 IGHV3-49A0A0A0MS15 119 aa12.97□□□□□ -0.33
MRPL28-201ENST00000199706 HELTA6NFD8 242 aa12.97□□□□□ -0.33
MRPL28-201ENST00000199706 PMS2P5A8MQ11 134 aa12.97□□□□□ -0.33
MRPL28-201ENST00000199706 H3BP45 60 aa12.97□□□□□ -0.33
MRPL28-201ENST00000199706 DFFBO76075 338 aa12.97□□□□□ -0.33
MRPL28-201ENST00000199706 APOHP02749 345 aaPredicted RBP12.97□□□□□ -0.33
MRPL28-201ENST00000199706 P2RY1P47900 373 aa12.97□□□□□ -0.33
MRPL28-201ENST00000199706 USF2Q15853 346 aaPredicted RBP12.97□□□□□ -0.33
MRPL28-201ENST00000199706 ACOT7LQ6ZUV0 252 aa12.97□□□□□ -0.33
MRPL28-201ENST00000199706 WWC2-AS2Q96NR7 200 aa12.97□□□□□ -0.33
MRPL28-201ENST00000199706 GGACTQ9BVM4 153 aa12.97□□□□□ -0.33
MRPL28-201ENST00000199706 WFDC10AQ9H1F0 79 aa12.97□□□□□ -0.33
MRPL28-201ENST00000199706 GSKIPQ9P0R6 139 aa12.97□□□□□ -0.33
MRPL28-201ENST00000199706 RABAC1Q9UI14 185 aa12.97□□□□□ -0.33
MRPL28-201ENST00000199706 SELENOKQ9Y6D0 94 aa12.97□□□□□ -0.33
MRPL28-201ENST00000199706 RBMY1BA6NDE4 496 aaKnown RBP12.96□□□□□ -0.33
MRPL28-201ENST00000199706 RBMY1EA6NEQ0 496 aaKnown RBP12.96□□□□□ -0.33
MRPL28-201ENST00000199706 CCSO14618 274 aa12.96□□□□□ -0.33
MRPL28-201ENST00000199706 RBMY1DP0C7P1 496 aaKnown RBP12.96□□□□□ -0.33
MRPL28-201ENST00000199706 AP2S1P53680 142 aaPredicted RBP12.96□□□□□ -0.33
MRPL28-201ENST00000199706 DLK1P80370 383 aa12.96□□□□□ -0.33
MRPL28-201ENST00000199706 IL15RAQ13261 267 aa12.96□□□□□ -0.33
MRPL28-201ENST00000199706 GSG1LQ6UXU4 331 aa12.96□□□□□ -0.33
MRPL28-201ENST00000199706 TMEM144Q7Z5S9 345 aa12.96□□□□□ -0.33
MRPL28-201ENST00000199706 GLMPQ8WWB7 406 aa12.96□□□□□ -0.33
MRPL28-201ENST00000199706 RCHY1Q96PM5 261 aa12.96□□□□□ -0.33
MRPL28-201ENST00000199706 PAIP2BQ9ULR5 123 aaKnown RBP12.96□□□□□ -0.33
MRPL28-201ENST00000199706 SLC45A2Q9UMX9 530 aa12.96□□□□□ -0.33
MRPL28-201ENST00000199706 IGHV3OR16-13A0A075B7E8 117 aa12.95□□□□□ -0.34
MRPL28-201ENST00000199706 IGHV3-74A0A0B4J1X5 117 aa12.95□□□□□ -0.34
MRPL28-201ENST00000199706 C7orf66A4D0T2 115 aa12.95□□□□□ -0.34
MRPL28-201ENST00000199706 C5orf51A6NDU8 294 aa12.95□□□□□ -0.34
MRPL28-201ENST00000199706 INMT-MINDY4F8WBC2 141 aa12.95□□□□□ -0.34
MRPL28-201ENST00000199706 BUB3O43684 328 aa12.95□□□□□ -0.34
MRPL28-201ENST00000199706 SCGB1D2O95969 90 aa12.95□□□□□ -0.34
MRPL28-201ENST00000199706 C16orf54Q6UWD8 224 aa12.95□□□□□ -0.34
MRPL28-201ENST00000199706 LILRB2Q8N423 598 aa12.95□□□□□ -0.34
MRPL28-201ENST00000199706 GGTLC1Q9BX51 225 aa12.95□□□□□ -0.34
MRPL28-201ENST00000199706 MS4A6AQ9H2W1 248 aa12.95□□□□□ -0.34
MRPL28-201ENST00000199706 FAM25EA8MYX2 175 aa12.94□□□□□ -0.34
MRPL28-201ENST00000199706 K7EPK0 472 aa12.94□□□□□ -0.34
MRPL28-201ENST00000199706 ZNF90Q03938 601 aa12.94□□□□□ -0.34
MRPL28-201ENST00000199706 C1orf194Q5T5A4 169 aa12.94□□□□□ -0.34
MRPL28-201ENST00000199706 OR10P1Q8NGE3 313 aa12.94□□□□□ -0.34
MRPL28-201ENST00000199706 C11orf1Q9H5F2 150 aa12.94□□□□□ -0.34
MRPL28-201ENST00000199706 SEPSECSQ9HD40 501 aaKnown RBP12.94□□□□□ -0.34
MRPL28-201ENST00000199706 LOC102724200A0A096LPH7 203 aaPredicted RBP12.93□□□□□ -0.34
MRPL28-201ENST00000199706 KIR2DL5BA0A0G2JN68 375 aa12.93□□□□□ -0.34
MRPL28-201ENST00000199706 KIR2DL5BA0A0G2JPC4 375 aa12.93□□□□□ -0.34
MRPL28-201ENST00000199706 PVALBP20472 110 aaPredicted RBP12.93□□□□□ -0.34
MRPL28-201ENST00000199706 S100A7P31151 101 aa12.93□□□□□ -0.34
MRPL28-201ENST00000199706 AKR1C1Q04828 323 aa12.93□□□□□ -0.34
MRPL28-201ENST00000199706 KIR2DL5AQ8N109 375 aa12.93□□□□□ -0.34
MRPL28-201ENST00000199706 KIR2DL5BQ8NHK3 375 aa12.93□□□□□ -0.34
MRPL28-201ENST00000199706 DNAH7Q8WXX0 4024 aa12.92□□□□□ -0.34
MRPL28-201ENST00000199706 IGHV3-66A0A0C4DH42 116 aa12.92□□□□□ -0.34
MRPL28-201ENST00000199706 K7EQG2 157 aa12.92□□□□□ -0.34
MRPL28-201ENST00000199706 L7N2F9 121 aa12.92□□□□□ -0.34
MRPL28-201ENST00000199706 DEDDO75618 318 aa12.92□□□□□ -0.34
MRPL28-201ENST00000199706 PTTG1O95997 202 aa12.92□□□□□ -0.34
MRPL28-201ENST00000199706 METTL15P1P0C7V9 234 aa12.92□□□□□ -0.34
MRPL28-201ENST00000199706 SELENOTP62341 195 aa12.92□□□□□ -0.34
MRPL28-201ENST00000199706 VAMP2P63027 116 aa12.92□□□□□ -0.34
MRPL28-201ENST00000199706 DCANP1Q8TF63 244 aa12.92□□□□□ -0.34
MRPL28-201ENST00000199706 CITED4Q96RK1 184 aa12.92□□□□□ -0.34
MRPL28-201ENST00000199706 MAP6D1Q9H9H5 199 aa12.92□□□□□ -0.34
MRPL28-201ENST00000199706 MGAT4CQ9UBM8 478 aa12.92□□□□□ -0.34
MRPL28-201ENST00000199706 FBXL17Q9UF56 701 aa12.92□□□□□ -0.34
MRPL28-201ENST00000199706 DNASE2O00115 360 aaPredicted RBP12.91□□□□□ -0.34
MRPL28-201ENST00000199706 UBE2CO00762 179 aa12.91□□□□□ -0.34
MRPL28-201ENST00000199706 APOC4P55056 127 aa12.91□□□□□ -0.34
MRPL28-201ENST00000199706 RPL11P62913 178 aaKnown RBP12.91□□□□□ -0.34
MRPL28-201ENST00000199706 BPIFCQ8NFQ6 507 aa12.91□□□□□ -0.34
MRPL28-201ENST00000199706 NMES1Q9C002 83 aa12.91□□□□□ -0.34
MRPL28-201ENST00000199706 NPVFQ9HCQ7 196 aa12.91□□□□□ -0.34
MRPL28-201ENST00000199706 LYRM2Q9NU23 88 aaPredicted RBP12.91□□□□□ -0.34
MRPL28-201ENST00000199706 PLP1P60201 277 aa12.9□□□□□ -0.34
MRPL28-201ENST00000199706 CYCSP99999 105 aaKnown RBP12.9□□□□□ -0.34
MRPL28-201ENST00000199706 SAMD13Q5VXD3 122 aa12.9□□□□□ -0.34
MRPL28-201ENST00000199706 SIGLEC15Q6ZMC9 328 aa12.9□□□□□ -0.34
MRPL28-201ENST00000199706 GBGT1Q8N5D6 347 aa12.9□□□□□ -0.34
MRPL28-201ENST00000199706 NRN1Q9NPD7 142 aa12.9□□□□□ -0.34
MRPL28-201ENST00000199706 UBQLN2Q9UHD9 624 aa12.9□□□□□ -0.34
MRPL28-201ENST00000199706 TP53TG1Q9Y2A0 90 aa12.9□□□□□ -0.34
MRPL28-201ENST00000199706 LSM5Q9Y4Y9 91 aaKnown RBP12.9□□□□□ -0.34
MRPL28-201ENST00000199706 LYZP61626 148 aa12.89□□□□□ -0.35
MRPL28-201ENST00000199706 TEPPQ6URK8 271 aa12.89□□□□□ -0.35
MRPL28-201ENST00000199706 Q6ZWC4 215 aa12.89□□□□□ -0.35
MRPL28-201ENST00000199706 STXBP6Q8NFX7 210 aa12.89□□□□□ -0.35
MRPL28-201ENST00000199706 PBDC1Q9BVG4 233 aa12.89□□□□□ -0.35
MRPL28-201ENST00000199706 IGKV3-7A0A075B6H7 116 aa12.88□□□□□ -0.35
MRPL28-201ENST00000199706 CCNKO75909 580 aa12.88□□□□□ -0.35
MRPL28-201ENST00000199706 TFPI2P48307 235 aa12.88□□□□□ -0.35
MRPL28-201ENST00000199706 CAV2P51636 162 aa12.88□□□□□ -0.35
MRPL28-201ENST00000199706 OR2F1Q13607 317 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms