RNA–Protein interactions for RNA: ENST00000064724.7

CLDN11-201, Transcript of claudin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN11, Length 2,169 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-201ENST00000064724 PRB3Q04118 309 aaPredicted RBP13.81□□□□□ -0.2
CLDN11-201ENST00000064724 ZNF672Q499Z4 452 aaPredicted RBP13.81□□□□□ -0.2
CLDN11-201ENST00000064724 TPTE2P1Q5T6R2 138 aa13.81□□□□□ -0.2
CLDN11-201ENST00000064724 LY6G5BQ8NDX9 201 aa13.81□□□□□ -0.2
CLDN11-201ENST00000064724 TBX15Q96SF7 602 aa13.81□□□□□ -0.2
CLDN11-201ENST00000064724 MALRD1Q5VYJ5 2156 aa13.81□□□□□ -0.2
CLDN11-201ENST00000064724 PLXNB1O43157 2135 aa13.81□□□□□ -0.2
CLDN11-201ENST00000064724 PGPA6NDG6 321 aa13.81□□□□□ -0.2
CLDN11-201ENST00000064724 GPX1P07203 203 aa13.81□□□□□ -0.2
CLDN11-201ENST00000064724 APELAP0DMC3 54 aa13.81□□□□□ -0.2
CLDN11-201ENST00000064724 CD33P20138 364 aa13.81□□□□□ -0.2
CLDN11-201ENST00000064724 GNG5P63218 68 aa13.81□□□□□ -0.2
CLDN11-201ENST00000064724 SRSF8Q9BRL6 282 aaKnown RBP13.81□□□□□ -0.2
CLDN11-201ENST00000064724 SSBP3Q9BWW4 388 aaPredicted RBP13.81□□□□□ -0.2
CLDN11-201ENST00000064724 FBXL15Q9H469 300 aa13.81□□□□□ -0.2
CLDN11-201ENST00000064724 ZNF331Q9NQX6 463 aaPredicted RBP13.81□□□□□ -0.2
CLDN11-201ENST00000064724 POLEQ07864 2286 aa13.81□□□□□ -0.2
CLDN11-201ENST00000064724 SLC25A5P05141 298 aaKnown RBP13.8□□□□□ -0.2
CLDN11-201ENST00000064724 COX7A1P24310 79 aa13.8□□□□□ -0.2
CLDN11-201ENST00000064724 GRNP28799 593 aaKnown RBP13.8□□□□□ -0.2
CLDN11-201ENST00000064724 KIAA1644Q3SXP7 199 aa13.8□□□□□ -0.2
CLDN11-201ENST00000064724 TEX43Q6ZNM6 134 aa13.8□□□□□ -0.2
CLDN11-201ENST00000064724 BLNKQ8WV28 456 aa13.8□□□□□ -0.2
CLDN11-201ENST00000064724 SRSF12Q8WXF0 261 aaKnown RBP13.8□□□□□ -0.2
CLDN11-201ENST00000064724 MLST8Q9BVC4 326 aa13.8□□□□□ -0.2
CLDN11-201ENST00000064724 SAMD10Q9BYL1 202 aa13.8□□□□□ -0.2
CLDN11-201ENST00000064724 FAM90A27PA6NNH2 459 aa13.79□□□□□ -0.2
CLDN11-201ENST00000064724 I3L2K1 104 aa13.79□□□□□ -0.2
CLDN11-201ENST00000064724 APCSP02743 223 aa13.79□□□□□ -0.2
CLDN11-201ENST00000064724 SNRPCP09234 159 aaKnown RBP13.79□□□□□ -0.2
CLDN11-201ENST00000064724 IGLC1P0CG04 106 aa13.79□□□□□ -0.2
CLDN11-201ENST00000064724 HIST1H1EP10412 219 aaKnown RBP13.79□□□□□ -0.2
CLDN11-201ENST00000064724 UBE2G1P62253 170 aa13.79□□□□□ -0.2
CLDN11-201ENST00000064724 USF2Q15853 346 aaPredicted RBP13.79□□□□□ -0.2
CLDN11-201ENST00000064724 OR8B3Q8NGG8 313 aa13.79□□□□□ -0.2
CLDN11-201ENST00000064724 GPR82Q96P67 336 aa13.79□□□□□ -0.2
CLDN11-201ENST00000064724 OR8B2Q96RD0 313 aa13.79□□□□□ -0.2
CLDN11-201ENST00000064724 PTPRZ1P23471 2315 aaPredicted RBP13.79□□□□□ -0.2
CLDN11-201ENST00000064724 IGHV3-21A0A0B4J1V1 117 aa13.79□□□□□ -0.2
CLDN11-201ENST00000064724 ZNF705FA8MVS1 300 aaPredicted RBP13.79□□□□□ -0.2
CLDN11-201ENST00000064724 ZNF705DP0CH99 300 aaPredicted RBP13.79□□□□□ -0.2
CLDN11-201ENST00000064724 ZNF705BP0CI00 300 aaPredicted RBP13.79□□□□□ -0.2
CLDN11-201ENST00000064724 SIGLECL1Q8N7X8 197 aa13.79□□□□□ -0.2
CLDN11-201ENST00000064724 C5orf17Q8NAS9 161 aa13.79□□□□□ -0.2
CLDN11-201ENST00000064724 NUP35Q8NFH5 326 aa13.79□□□□□ -0.2
CLDN11-201ENST00000064724 TSKUQ8WUA8 353 aa13.79□□□□□ -0.2
CLDN11-201ENST00000064724 ATG101Q9BSB4 218 aa13.79□□□□□ -0.2
CLDN11-201ENST00000064724 A0A1B0GV90 55 aa13.78□□□□□ -0.2
CLDN11-201ENST00000064724 ZNF253O75346 499 aa13.78□□□□□ -0.2
CLDN11-201ENST00000064724 LIPFP07098 398 aa13.78□□□□□ -0.2
CLDN11-201ENST00000064724 SRIP30626 198 aa13.78□□□□□ -0.2
CLDN11-201ENST00000064724 SPTBN2O15020 2390 aa13.78□□□□□ -0.2
CLDN11-201ENST00000064724 TOMM40O96008 361 aa13.78□□□□□ -0.2
CLDN11-201ENST00000064724 LDLRAD2Q5SZI1 272 aa13.78□□□□□ -0.2
CLDN11-201ENST00000064724 ASPHD1Q5U4P2 390 aa13.78□□□□□ -0.2
CLDN11-201ENST00000064724 TOMM20LQ6UXN7 152 aa13.78□□□□□ -0.2
CLDN11-201ENST00000064724 LHFPL4Q7Z7J7 247 aa13.78□□□□□ -0.2
CLDN11-201ENST00000064724 KCNS1Q96KK3 526 aa13.78□□□□□ -0.2
CLDN11-201ENST00000064724 HIGD1AQ9Y241 93 aa13.78□□□□□ -0.2
CLDN11-201ENST00000064724 A0A1W2PS18 150 aa13.77□□□□□ -0.21
CLDN11-201ENST00000064724 PSG1P11464 419 aa13.77□□□□□ -0.21
CLDN11-201ENST00000064724 SLAQ13239 276 aa13.77□□□□□ -0.21
CLDN11-201ENST00000064724 ZNF600Q6ZNG1 722 aa13.77□□□□□ -0.21
CLDN11-201ENST00000064724 FMC1Q96HJ9 113 aa13.77□□□□□ -0.21
CLDN11-201ENST00000064724 RCHY1Q96PM5 261 aa13.77□□□□□ -0.21
CLDN11-201ENST00000064724 GSX1Q9H4S2 264 aaPredicted RBP13.77□□□□□ -0.21
CLDN11-201ENST00000064724 TMEM14CQ9P0S9 112 aa13.77□□□□□ -0.21
CLDN11-201ENST00000064724 LTAP01374 205 aa13.76□□□□□ -0.21
CLDN11-201ENST00000064724 CDKN1AP38936 164 aa13.76□□□□□ -0.21
CLDN11-201ENST00000064724 OR11H6Q8NGC7 330 aa13.76□□□□□ -0.21
CLDN11-201ENST00000064724 C20orf144Q9BQM9 153 aa13.76□□□□□ -0.21
CLDN11-201ENST00000064724 PRSS22Q9GZN4 317 aa13.76□□□□□ -0.21
CLDN11-201ENST00000064724 Q9H3A6 140 aa13.76□□□□□ -0.21
CLDN11-201ENST00000064724 TLN1Q9Y490 2541 aaKnown RBP13.76□□□□□ -0.21
CLDN11-201ENST00000064724 TIMM23O14925 209 aa13.76□□□□□ -0.21
CLDN11-201ENST00000064724 TCRAP04437 139 aa13.76□□□□□ -0.21
CLDN11-201ENST00000064724 GDF5OSQ5U4N7 250 aa13.76□□□□□ -0.21
CLDN11-201ENST00000064724 PRR27Q6MZM9 219 aa13.76□□□□□ -0.21
CLDN11-201ENST00000064724 ATP5L2Q7Z4Y8 100 aa13.76□□□□□ -0.21
CLDN11-201ENST00000064724 NEU1Q99519 415 aa13.76□□□□□ -0.21
CLDN11-201ENST00000064724 WNT10AQ9GZT5 417 aa13.76□□□□□ -0.21
CLDN11-201ENST00000064724 ZNF586Q9NXT0 402 aa13.76□□□□□ -0.21
CLDN11-201ENST00000064724 ONECUT1Q9UBC0 465 aa13.76□□□□□ -0.21
CLDN11-201ENST00000064724 TBL2Q9Y4P3 447 aaKnown RBP13.76□□□□□ -0.21
CLDN11-201ENST00000064724 CCL21O00585 134 aa13.75□□□□□ -0.21
CLDN11-201ENST00000064724 LEMD1Q68G75 181 aa13.75□□□□□ -0.21
CLDN11-201ENST00000064724 MRPL27Q9P0M9 148 aaKnown RBP13.75□□□□□ -0.21
CLDN11-201ENST00000064724 FBXL7Q9UJT9 491 aa13.75□□□□□ -0.21
CLDN11-201ENST00000064724 MSRB2Q9Y3D2 182 aa13.75□□□□□ -0.21
CLDN11-201ENST00000064724 PTPRQQ9UMZ3 2332 aa13.75□□□□□ -0.21
CLDN11-201ENST00000064724 HIGD1CA8MV81 97 aa13.75□□□□□ -0.21
CLDN11-201ENST00000064724 ZNF324O75467 553 aaPredicted RBP13.75□□□□□ -0.21
CLDN11-201ENST00000064724 IGKV1-17P01599 117 aa13.75□□□□□ -0.21
CLDN11-201ENST00000064724 HTR1DP28221 377 aa13.75□□□□□ -0.21
CLDN11-201ENST00000064724 PLGLAQ15195 96 aa13.75□□□□□ -0.21
CLDN11-201ENST00000064724 CT83Q5H943 113 aa13.75□□□□□ -0.21
CLDN11-201ENST00000064724 TMEM68Q96MH6 324 aa13.75□□□□□ -0.21
CLDN11-201ENST00000064724 RBM14Q96PK6 669 aaKnown RBP13.75□□□□□ -0.21
CLDN11-201ENST00000064724 SLC25A39Q9BZJ4 359 aaPredicted RBP13.75□□□□□ -0.21
CLDN11-201ENST00000064724 RAB1BQ9H0U4 201 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms