RNA–Protein interactions for RNA: ENST00000640554.1

SDHD-209, Transcript of succinate dehydrogenase complex subunit D, human

TSL 5

Gene SDHD, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SDHD-209	ENST00000640554	TMEM170A	Q8WVE7	144 aa		10.71	□□□□□ -0.69
SDHD-209	ENST00000640554	NARS2	Q96I59	477 aa	Known RBP	10.71	□□□□□ -0.69
SDHD-209	ENST00000640554	FAM110A	Q9BQ89	295 aa		10.71	□□□□□ -0.69
SDHD-209	ENST00000640554		U3KQK5	164 aa		10.71	□□□□□ -0.69
SDHD-209	ENST00000640554	SCAF4	O95104	1147 aa	Known RBP	10.7	□□□□□ -0.7
SDHD-209	ENST00000640554	FABP1	P07148	127 aa		10.7	□□□□□ -0.7
SDHD-209	ENST00000640554	IGLC1	P0CG04	106 aa		10.7	□□□□□ -0.7
SDHD-209	ENST00000640554	OR10J1	P30954	320 aa		10.7	□□□□□ -0.7
SDHD-209	ENST00000640554	PAFAH1B2	P68402	229 aa		10.7	□□□□□ -0.7
SDHD-209	ENST00000640554	SBSPON	Q8IVN8	264 aa		10.7	□□□□□ -0.7
SDHD-209	ENST00000640554	NPIPB3	Q92617	1050 aa		10.7	□□□□□ -0.7
SDHD-209	ENST00000640554	ZNF414	Q96IQ9	312 aa		10.7	□□□□□ -0.7
SDHD-209	ENST00000640554	METTL26	Q96S19	204 aa		10.7	□□□□□ -0.7
SDHD-209	ENST00000640554	ASCL2	Q99929	193 aa		10.7	□□□□□ -0.7
SDHD-209	ENST00000640554	VSIR	Q9H7M9	311 aa		10.7	□□□□□ -0.7
SDHD-209	ENST00000640554	ZFAND3	Q9H8U3	227 aa		10.7	□□□□□ -0.7
SDHD-209	ENST00000640554	NUDT15	Q9NV35	164 aa		10.7	□□□□□ -0.7
SDHD-209	ENST00000640554	MRPL36	Q9P0J6	103 aa	Known RBP	10.7	□□□□□ -0.7
SDHD-209	ENST00000640554	IGHV3OR16-8	A0A075B7F1	116 aa		10.69	□□□□□ -0.7
SDHD-209	ENST00000640554	WRB	O00258	174 aa		10.69	□□□□□ -0.7
SDHD-209	ENST00000640554	ZNF207	O43670	478 aa	Known RBP	10.69	□□□□□ -0.7
SDHD-209	ENST00000640554	ADAP1	O75689	374 aa		10.69	□□□□□ -0.7
SDHD-209	ENST00000640554	UPK1B	O75841	260 aa		10.69	□□□□□ -0.7
SDHD-209	ENST00000640554	CD7	P09564	240 aa		10.69	□□□□□ -0.7
SDHD-209	ENST00000640554	H2AFB2	P0C5Z0	115 aa		10.69	□□□□□ -0.7
SDHD-209	ENST00000640554	CRYBB3	P26998	211 aa		10.69	□□□□□ -0.7
SDHD-209	ENST00000640554	NKX2-1	P43699	371 aa	Predicted RBP	10.69	□□□□□ -0.7
SDHD-209	ENST00000640554	GRAMD2B	Q96HH9	432 aa		10.69	□□□□□ -0.7
SDHD-209	ENST00000640554	SLC35E1	Q96K37	410 aa		10.69	□□□□□ -0.7
SDHD-209	ENST00000640554	PFDN2	Q9UHV9	154 aa		10.69	□□□□□ -0.7
SDHD-209	ENST00000640554	RD3L	P0DJH9	198 aa		10.68	□□□□□ -0.7
SDHD-209	ENST00000640554	IAPP	P10997	89 aa		10.68	□□□□□ -0.7
SDHD-209	ENST00000640554	IAH1	Q2TAA2	248 aa	Predicted RBP	10.68	□□□□□ -0.7
SDHD-209	ENST00000640554	TIGIT	Q495A1	244 aa		10.68	□□□□□ -0.7
SDHD-209	ENST00000640554	LINC00322	Q6ZN03	302 aa	Predicted RBP	10.68	□□□□□ -0.7
SDHD-209	ENST00000640554	OR4D5	Q8NGN0	318 aa		10.68	□□□□□ -0.7
SDHD-209	ENST00000640554	ZNF431	Q8TF32	576 aa	Predicted RBP	10.68	□□□□□ -0.7
SDHD-209	ENST00000640554	ACY3	Q96HD9	319 aa		10.68	□□□□□ -0.7
SDHD-209	ENST00000640554	WWC2-AS2	Q96NR7	200 aa		10.68	□□□□□ -0.7
SDHD-209	ENST00000640554	RNF2	Q99496	336 aa		10.68	□□□□□ -0.7
SDHD-209	ENST00000640554	TM2D3	Q9BRN9	247 aa		10.68	□□□□□ -0.7
SDHD-209	ENST00000640554	STRAP	Q9Y3F4	350 aa	Known RBP	10.68	□□□□□ -0.7
SDHD-209	ENST00000640554	TRAV6	A0A075B6T7	132 aa		10.67	□□□□□ -0.7
SDHD-209	ENST00000640554	TRAV2	A0A0B4J234	112 aa		10.67	□□□□□ -0.7
SDHD-209	ENST00000640554	TOMM40	O96008	361 aa		10.67	□□□□□ -0.7
SDHD-209	ENST00000640554	CFD	P00746	253 aa	Predicted RBP	10.67	□□□□□ -0.7
SDHD-209	ENST00000640554	IL5	P05113	134 aa		10.67	□□□□□ -0.7
SDHD-209	ENST00000640554	EIF2B2	P49770	351 aa	Known RBP	10.67	□□□□□ -0.7
SDHD-209	ENST00000640554	TAS2R30	P59541	319 aa		10.67	□□□□□ -0.7
SDHD-209	ENST00000640554	GAMT	Q14353	236 aa		10.67	□□□□□ -0.7
SDHD-209	ENST00000640554	HAGH	Q16775	308 aa		10.67	□□□□□ -0.7
SDHD-209	ENST00000640554	FAM90A2P	Q658T7	463 aa		10.67	□□□□□ -0.7
SDHD-209	ENST00000640554	C11orf87	Q6NUJ2	197 aa		10.67	□□□□□ -0.7
SDHD-209	ENST00000640554	DEFB125	Q8N687	156 aa		10.67	□□□□□ -0.7
SDHD-209	ENST00000640554	SMIM8	Q96KF7	97 aa		10.67	□□□□□ -0.7
SDHD-209	ENST00000640554	RAB40C	Q96S21	281 aa		10.67	□□□□□ -0.7
SDHD-209	ENST00000640554	MAGT1	Q9H0U3	335 aa		10.67	□□□□□ -0.7
SDHD-209	ENST00000640554	TBC1D24	Q9ULP9	559 aa		10.67	□□□□□ -0.7
SDHD-209	ENST00000640554	NUP62	P37198	522 aa	Predicted RBP	10.66	□□□□□ -0.7
SDHD-209	ENST00000640554	AP2S1	P53680	142 aa	Predicted RBP	10.66	□□□□□ -0.7
SDHD-209	ENST00000640554	DEFA1	P59665	94 aa		10.66	□□□□□ -0.7
SDHD-209	ENST00000640554	DEFA3	P59666	94 aa		10.66	□□□□□ -0.7
SDHD-209	ENST00000640554	SPANXN5	Q5MJ07	72 aa		10.66	□□□□□ -0.7
SDHD-209	ENST00000640554	TCF24	Q7RTU0	167 aa		10.66	□□□□□ -0.7
SDHD-209	ENST00000640554	C12orf45	Q8N5I9	185 aa	Predicted RBP	10.66	□□□□□ -0.7
SDHD-209	ENST00000640554	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	10.66	□□□□□ -0.7
SDHD-209	ENST00000640554	OR51G1	Q8NGK1	321 aa		10.66	□□□□□ -0.7
SDHD-209	ENST00000640554	ENKUR	Q8TC29	256 aa		10.66	□□□□□ -0.7
SDHD-209	ENST00000640554	SPATA25	Q9BR10	227 aa		10.66	□□□□□ -0.7
SDHD-209	ENST00000640554	SRD5A3	Q9H8P0	318 aa		10.66	□□□□□ -0.7
SDHD-209	ENST00000640554	PAIP2B	Q9ULR5	123 aa	Known RBP	10.66	□□□□□ -0.7
SDHD-209	ENST00000640554	HELT	A6NFD8	242 aa		10.65	□□□□□ -0.7
SDHD-209	ENST00000640554	ZFP92	A6NM28	416 aa		10.65	□□□□□ -0.7
SDHD-209	ENST00000640554	MPTX1	A8MV57	137 aa		10.65	□□□□□ -0.7
SDHD-209	ENST00000640554	SNRPGP15	A8MWD9	76 aa		10.65	□□□□□ -0.7
SDHD-209	ENST00000640554	HNRNPC	P07910	306 aa	Known RBP eCLIP	10.65	□□□□□ -0.7
SDHD-209	ENST00000640554	POLR2G	P62487	172 aa	Known RBP eCLIP	10.65	□□□□□ -0.7
SDHD-209	ENST00000640554	ST8SIA2	Q92186	375 aa		10.65	□□□□□ -0.7
SDHD-209	ENST00000640554	RCHY1	Q96PM5	261 aa		10.65	□□□□□ -0.7
SDHD-209	ENST00000640554	TRGV9	Q99603	122 aa		10.65	□□□□□ -0.7
SDHD-209	ENST00000640554	GPN1	Q9HCN4	374 aa	Predicted RBP	10.65	□□□□□ -0.7
SDHD-209	ENST00000640554	PSENEN	Q9NZ42	101 aa		10.65	□□□□□ -0.7
SDHD-209	ENST00000640554	GSKIP	Q9P0R6	139 aa		10.65	□□□□□ -0.7
SDHD-209	ENST00000640554		U3KQE9	123 aa		10.65	□□□□□ -0.7
SDHD-209	ENST00000640554	IGHV3-49	A0A0A0MS15	119 aa		10.64	□□□□□ -0.71
SDHD-209	ENST00000640554	DNASE2	O00115	360 aa	Predicted RBP	10.64	□□□□□ -0.71
SDHD-209	ENST00000640554	PRAF2	O60831	178 aa		10.64	□□□□□ -0.71
SDHD-209	ENST00000640554	DFFB	O76075	338 aa		10.64	□□□□□ -0.71
SDHD-209	ENST00000640554	PSG1	P11464	419 aa		10.64	□□□□□ -0.71
SDHD-209	ENST00000640554	S100A7	P31151	101 aa		10.64	□□□□□ -0.71
SDHD-209	ENST00000640554	OR8G2P	Q6IF36	304 aa		10.64	□□□□□ -0.71
SDHD-209	ENST00000640554	SELENOK	Q9Y6D0	94 aa		10.64	□□□□□ -0.71
SDHD-209	ENST00000640554	COL7A1	Q02388	2944 aa		10.64	□□□□□ -0.71
SDHD-209	ENST00000640554	IGHV3OR16-13	A0A075B7E8	117 aa		10.63	□□□□□ -0.71
SDHD-209	ENST00000640554	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	10.63	□□□□□ -0.71
SDHD-209	ENST00000640554	IGHV3-74	A0A0B4J1X5	117 aa		10.63	□□□□□ -0.71
SDHD-209	ENST00000640554	RBMY1B	A6NDE4	496 aa	Known RBP	10.63	□□□□□ -0.71
SDHD-209	ENST00000640554	RBMY1E	A6NEQ0	496 aa	Known RBP	10.63	□□□□□ -0.71
SDHD-209	ENST00000640554	PRSS46	E5RG02	174 aa		10.63	□□□□□ -0.71
SDHD-209	ENST00000640554	FNDC10	F2Z333	226 aa		10.63	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 260.6 ms