RNA–Protein interactions for RNA: ENST00000639857.1

PTPN11-207, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 5 BASIC

Gene PTPN11, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-207ENST00000639857 YPEL3P61236 119 aaPredicted RBP13.16□□□□□ -0.3
PTPN11-207ENST00000639857 MLANAQ16655 118 aa13.16□□□□□ -0.3
PTPN11-207ENST00000639857 KIR2DL5AQ8N109 375 aa13.16□□□□□ -0.3
PTPN11-207ENST00000639857 KIR2DL5BQ8NHK3 375 aa13.16□□□□□ -0.3
PTPN11-207ENST00000639857 C7orf50Q9BRJ6 194 aaKnown RBP13.16□□□□□ -0.3
PTPN11-207ENST00000639857 RBKSQ9H477 322 aa13.16□□□□□ -0.3
PTPN11-207ENST00000639857 NBEAL2Q6ZNJ1 2754 aa13.16□□□□□ -0.3
PTPN11-207ENST00000639857 IGHV3-49A0A0A0MS15 119 aa13.15□□□□□ -0.3
PTPN11-207ENST00000639857 UBE2CO00762 179 aa13.15□□□□□ -0.3
PTPN11-207ENST00000639857 NDUFB6O95139 128 aa13.15□□□□□ -0.3
PTPN11-207ENST00000639857 NXPH3O95157 252 aa13.15□□□□□ -0.3
PTPN11-207ENST00000639857 CRYBB3P26998 211 aa13.15□□□□□ -0.3
PTPN11-207ENST00000639857 OR10J1P30954 320 aa13.15□□□□□ -0.3
PTPN11-207ENST00000639857 PPP1R1AQ13522 171 aa13.15□□□□□ -0.3
PTPN11-207ENST00000639857 BAK1Q16611 211 aa13.15□□□□□ -0.3
PTPN11-207ENST00000639857 TCF24Q7RTU0 167 aa13.15□□□□□ -0.3
PTPN11-207ENST00000639857 ST8SIA2Q92186 375 aa13.15□□□□□ -0.3
PTPN11-207ENST00000639857 NARS2Q96I59 477 aaKnown RBP13.15□□□□□ -0.3
PTPN11-207ENST00000639857 RETNQ9HD89 108 aa13.15□□□□□ -0.3
PTPN11-207ENST00000639857 UBQLN2Q9UHD9 624 aa13.15□□□□□ -0.3
PTPN11-207ENST00000639857 TP53TG1Q9Y2A0 90 aa13.15□□□□□ -0.3
PTPN11-207ENST00000639857 CENPXA8MT69 81 aa13.14□□□□□ -0.31
PTPN11-207ENST00000639857 MED6O75586 246 aa13.14□□□□□ -0.31
PTPN11-207ENST00000639857 TIGITQ495A1 244 aa13.14□□□□□ -0.31
PTPN11-207ENST00000639857 Q6ZWC4 215 aa13.14□□□□□ -0.31
PTPN11-207ENST00000639857 IL17DQ8TAD2 202 aa13.14□□□□□ -0.31
PTPN11-207ENST00000639857 SDHCQ99643 169 aaPredicted RBP13.14□□□□□ -0.31
PTPN11-207ENST00000639857 DNAH7Q8WXX0 4024 aa13.14□□□□□ -0.31
PTPN11-207ENST00000639857 DFFBO76075 338 aa13.13□□□□□ -0.31
PTPN11-207ENST00000639857 CNPY1Q3B7I2 92 aa13.13□□□□□ -0.31
PTPN11-207ENST00000639857 Q8WTZ3 238 aa13.13□□□□□ -0.31
PTPN11-207ENST00000639857 GRAMD2BQ96HH9 432 aa13.13□□□□□ -0.31
PTPN11-207ENST00000639857 CIB3Q96Q77 187 aaPredicted RBP13.13□□□□□ -0.31
PTPN11-207ENST00000639857 IGHV3OR16-13A0A075B7E8 117 aa13.12□□□□□ -0.31
PTPN11-207ENST00000639857 IGHV3-74A0A0B4J1X5 117 aa13.12□□□□□ -0.31
PTPN11-207ENST00000639857 APOHP02749 345 aaPredicted RBP13.12□□□□□ -0.31
PTPN11-207ENST00000639857 GPX4P36969 197 aaPredicted RBP13.12□□□□□ -0.31
PTPN11-207ENST00000639857 EIF2B2P49770 351 aaKnown RBP13.12□□□□□ -0.31
PTPN11-207ENST00000639857 WFDC3Q8IUB2 231 aa13.12□□□□□ -0.31
PTPN11-207ENST00000639857 TOMM40O96008 361 aa13.11□□□□□ -0.31
PTPN11-207ENST00000639857 IFNA4P05014 189 aa13.11□□□□□ -0.31
PTPN11-207ENST00000639857 IL7P13232 177 aa13.11□□□□□ -0.31
PTPN11-207ENST00000639857 NPIPB3Q92617 1050 aa13.11□□□□□ -0.31
PTPN11-207ENST00000639857 OVOL2Q9BRP0 275 aa13.11□□□□□ -0.31
PTPN11-207ENST00000639857 MS4A6AQ9H2W1 248 aa13.11□□□□□ -0.31
PTPN11-207ENST00000639857 MAP6D1Q9H9H5 199 aa13.11□□□□□ -0.31
PTPN11-207ENST00000639857 U3KQE9 123 aa13.11□□□□□ -0.31
PTPN11-207ENST00000639857 C9orf170A2RU37 121 aa13.1□□□□□ -0.31
PTPN11-207ENST00000639857 DNASE2O00115 360 aaPredicted RBP13.1□□□□□ -0.31
PTPN11-207ENST00000639857 HNRNPCP07910 306 aaKnown RBP eCLIP13.1□□□□□ -0.314e-6■□□□□ 11.1
PTPN11-207ENST00000639857 P2RY1P47900 373 aa13.1□□□□□ -0.31
PTPN11-207ENST00000639857 TFPI2P48307 235 aa13.1□□□□□ -0.31
PTPN11-207ENST00000639857 RAB11AP62491 216 aa13.1□□□□□ -0.31
PTPN11-207ENST00000639857 RPP30P78346 268 aaKnown RBP13.1□□□□□ -0.31
PTPN11-207ENST00000639857 LINC00299Q6ZSB3 139 aa13.1□□□□□ -0.31
PTPN11-207ENST00000639857 LILRB2Q8N423 598 aa13.1□□□□□ -0.31
PTPN11-207ENST00000639857 STPG3Q8N7X2 389 aa13.1□□□□□ -0.31
PTPN11-207ENST00000639857 COQ8AQ8NI60 647 aa13.1□□□□□ -0.31
PTPN11-207ENST00000639857 ACY3Q96HD9 319 aa13.1□□□□□ -0.31
PTPN11-207ENST00000639857 SLC35E1Q96K37 410 aa13.1□□□□□ -0.31
PTPN11-207ENST00000639857 IGKV3-7A0A075B6H7 116 aa13.09□□□□□ -0.31
PTPN11-207ENST00000639857 HELTA6NFD8 242 aa13.09□□□□□ -0.31
PTPN11-207ENST00000639857 SYNGR2O43760 224 aa13.09□□□□□ -0.31
PTPN11-207ENST00000639857 FABP1P07148 127 aa13.09□□□□□ -0.31
PTPN11-207ENST00000639857 RD3LP0DJH9 198 aa13.09□□□□□ -0.31
PTPN11-207ENST00000639857 BTCP35070 178 aa13.09□□□□□ -0.31
PTPN11-207ENST00000639857 NUP62P37198 522 aaPredicted RBP13.09□□□□□ -0.31
PTPN11-207ENST00000639857 AP2S1P53680 142 aaPredicted RBP13.09□□□□□ -0.31
PTPN11-207ENST00000639857 RPL11P62913 178 aaKnown RBP13.09□□□□□ -0.31
PTPN11-207ENST00000639857 DHRS2Q13268 280 aa13.09□□□□□ -0.31
PTPN11-207ENST00000639857 GGNBP1Q5YKI7 109 aa13.09□□□□□ -0.31
PTPN11-207ENST00000639857 GBGT1Q8N5D6 347 aa13.09□□□□□ -0.31
PTPN11-207ENST00000639857 IGHV3-66A0A0C4DH42 116 aa13.08□□□□□ -0.32
PTPN11-207ENST00000639857 IL4P05112 153 aa13.08□□□□□ -0.32
PTPN11-207ENST00000639857 HOXB5P09067 269 aa13.08□□□□□ -0.32
PTPN11-207ENST00000639857 OR4E1P0C645 316 aa13.08□□□□□ -0.32
PTPN11-207ENST00000639857 LYG2Q86SG7 212 aa13.08□□□□□ -0.32
PTPN11-207ENST00000639857 APRG1Q8IVJ8 170 aa13.08□□□□□ -0.32
PTPN11-207ENST00000639857 K7EQG2 157 aa13.07□□□□□ -0.32
PTPN11-207ENST00000639857 SPRY2O43597 315 aa13.07□□□□□ -0.32
PTPN11-207ENST00000639857 GAMTQ14353 236 aa13.07□□□□□ -0.32
PTPN11-207ENST00000639857 USF2Q15853 346 aaPredicted RBP13.07□□□□□ -0.32
PTPN11-207ENST00000639857 OR8G2PQ6IF36 304 aa13.07□□□□□ -0.32
PTPN11-207ENST00000639857 C16orf54Q6UWD8 224 aa13.07□□□□□ -0.32
PTPN11-207ENST00000639857 OR51G1Q8NGK1 321 aa13.07□□□□□ -0.32
PTPN11-207ENST00000639857 GLMPQ8WWB7 406 aa13.07□□□□□ -0.32
PTPN11-207ENST00000639857 CCDC32Q9BV29 185 aa13.07□□□□□ -0.32
PTPN11-207ENST00000639857 PFDN2Q9UHV9 154 aa13.07□□□□□ -0.32
PTPN11-207ENST00000639857 RABAC1Q9UI14 185 aa13.07□□□□□ -0.32
PTPN11-207ENST00000639857 ZFP92A6NM28 416 aa13.06□□□□□ -0.32
PTPN11-207ENST00000639857 IFNA21P01568 189 aa13.06□□□□□ -0.32
PTPN11-207ENST00000639857 IAPPP10997 89 aa13.06□□□□□ -0.32
PTPN11-207ENST00000639857 PSG1P11464 419 aa13.06□□□□□ -0.32
PTPN11-207ENST00000639857 RPL35AP18077 110 aaKnown RBP13.06□□□□□ -0.32
PTPN11-207ENST00000639857 DEFB135Q30KP9 77 aa13.06□□□□□ -0.32
PTPN11-207ENST00000639857 DCANP1Q8TF63 244 aa13.06□□□□□ -0.32
PTPN11-207ENST00000639857 RNF183Q96D59 192 aa13.06□□□□□ -0.32
PTPN11-207ENST00000639857 RNF125Q96EQ8 232 aa13.06□□□□□ -0.32
PTPN11-207ENST00000639857 FLVCR2Q9UPI3 526 aa13.06□□□□□ -0.32
PTPN11-207ENST00000639857 LINC00854A0A1B0GVQ3 168 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms