RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 WFDC10AQ9H1F0 79 aa16.35■□□□□ 0.21
SCN1B-206ENST00000638536 SMPXQ9UHP9 88 aa16.35■□□□□ 0.21
SCN1B-206ENST00000638536 NBEAL2Q6ZNJ1 2754 aa16.35■□□□□ 0.21
SCN1B-206ENST00000638536 IGHV7-4-1A0A0J9YVY3 117 aa16.34■□□□□ 0.21
SCN1B-206ENST00000638536 IGHV4-30-4P0DP06 118 aa16.34■□□□□ 0.21
SCN1B-206ENST00000638536 SLC25A4P12235 298 aa16.34■□□□□ 0.21
SCN1B-206ENST00000638536 NKX2-1P43699 371 aaPredicted RBP16.34■□□□□ 0.21
SCN1B-206ENST00000638536 DCTN2Q13561 401 aaKnown RBP16.34■□□□□ 0.21
SCN1B-206ENST00000638536 LILRB2Q8N423 598 aa16.34■□□□□ 0.21
SCN1B-206ENST00000638536 ZBTB8BQ8NAP8 495 aaPredicted RBP16.34■□□□□ 0.21
SCN1B-206ENST00000638536 GSKIPQ9P0R6 139 aa16.34■□□□□ 0.21
SCN1B-206ENST00000638536 PAIP2BQ9ULR5 123 aaKnown RBP16.34■□□□□ 0.21
SCN1B-206ENST00000638536 CHEK1O14757 476 aa16.34■□□□□ 0.21
SCN1B-206ENST00000638536 FRMD6-AS1P0C7T7 363 aa16.34■□□□□ 0.21
SCN1B-206ENST00000638536 C12orf45Q8N5I9 185 aaPredicted RBP16.34■□□□□ 0.21
SCN1B-206ENST00000638536 RNF2Q99496 336 aa16.34■□□□□ 0.21
SCN1B-206ENST00000638536 RHPN1-AS1Q9BWJ2 59 aa16.34■□□□□ 0.21
SCN1B-206ENST00000638536 TRAV14DV4A0A0A6YYC5 116 aa16.33■□□□□ 0.2
SCN1B-206ENST00000638536 PRSS46E5RG02 174 aa16.33■□□□□ 0.2
SCN1B-206ENST00000638536 SCGB1D2O95969 90 aa16.33■□□□□ 0.2
SCN1B-206ENST00000638536 OR10J1P30954 320 aa16.33■□□□□ 0.2
SCN1B-206ENST00000638536 PAX9P55771 341 aa16.33■□□□□ 0.2
SCN1B-206ENST00000638536 CD81P60033 236 aa16.33■□□□□ 0.2
SCN1B-206ENST00000638536 GAMTQ14353 236 aa16.33■□□□□ 0.2
SCN1B-206ENST00000638536 SPANXN5Q5MJ07 72 aa16.33■□□□□ 0.2
SCN1B-206ENST00000638536 IGHV3-66A0A0C4DH42 116 aa16.32■□□□□ 0.2
SCN1B-206ENST00000638536 SSSCA1O60232 199 aa16.32■□□□□ 0.2
SCN1B-206ENST00000638536 ETFRF1Q6IPR1 90 aa16.32■□□□□ 0.2
SCN1B-206ENST00000638536 GTSCR1Q86UQ5 136 aa16.32■□□□□ 0.2
SCN1B-206ENST00000638536 SBSPONQ8IVN8 264 aa16.32■□□□□ 0.2
SCN1B-206ENST00000638536 CIB3Q96Q77 187 aaPredicted RBP16.32■□□□□ 0.2
SCN1B-206ENST00000638536 NEURL2Q9BR09 285 aa16.32■□□□□ 0.2
SCN1B-206ENST00000638536 STAB2Q8WWQ8 2551 aa16.31■□□□□ 0.2
SCN1B-206ENST00000638536 TRAV30A0A087WSZ9 112 aa16.31■□□□□ 0.2
SCN1B-206ENST00000638536 ATP5IP56385 69 aaPredicted RBP16.31■□□□□ 0.2
SCN1B-206ENST00000638536 OR1S2Q8NGQ3 325 aa16.31■□□□□ 0.2
SCN1B-206ENST00000638536 ST8SIA2Q92186 375 aa16.31■□□□□ 0.2
SCN1B-206ENST00000638536 C19orf73Q9NVV2 129 aa16.31■□□□□ 0.2
SCN1B-206ENST00000638536 IGKV1D-37A0A075B6S9 117 aa16.3■□□□□ 0.2
SCN1B-206ENST00000638536 FAM25EA8MYX2 175 aa16.3■□□□□ 0.2
SCN1B-206ENST00000638536 MBPP02686 304 aaPredicted RBP16.3■□□□□ 0.2
SCN1B-206ENST00000638536 IL5P05113 134 aa16.3■□□□□ 0.2
SCN1B-206ENST00000638536 GPX4P36969 197 aaPredicted RBP16.3■□□□□ 0.2
SCN1B-206ENST00000638536 RBPMS2Q6ZRY4 209 aaKnown RBP16.3■□□□□ 0.2
SCN1B-206ENST00000638536 DEFB125Q8N687 156 aa16.3■□□□□ 0.2
SCN1B-206ENST00000638536 RCL1Q9Y2P8 373 aaKnown RBP16.3■□□□□ 0.2
SCN1B-206ENST00000638536 CCNKO75909 580 aa16.3■□□□□ 0.2
SCN1B-206ENST00000638536 RAB11AP62491 216 aa16.3■□□□□ 0.2
SCN1B-206ENST00000638536 PSENENQ9NZ42 101 aa16.3■□□□□ 0.2
SCN1B-206ENST00000638536 IGKV1OR2-108A0A075B7D4 117 aa16.29■□□□□ 0.2
SCN1B-206ENST00000638536 TRAV25A0A0B4J276 109 aa16.29■□□□□ 0.2
SCN1B-206ENST00000638536 TSPAN4O14817 238 aa16.29■□□□□ 0.2
SCN1B-206ENST00000638536 YPEL3P61236 119 aaPredicted RBP16.29■□□□□ 0.2
SCN1B-206ENST00000638536 FAM90A2PQ658T7 463 aa16.29■□□□□ 0.2
SCN1B-206ENST00000638536 GINS3Q9BRX5 216 aa16.29■□□□□ 0.2
SCN1B-206ENST00000638536 PMS2P5A8MQ11 134 aa16.28■□□□□ 0.2
SCN1B-206ENST00000638536 INMT-MINDY4F8WBC2 141 aa16.28■□□□□ 0.2
SCN1B-206ENST00000638536 ZNF90Q03938 601 aa16.28■□□□□ 0.2
SCN1B-206ENST00000638536 SMIM8Q96KF7 97 aa16.28■□□□□ 0.2
SCN1B-206ENST00000638536 VSIRQ9H7M9 311 aa16.28■□□□□ 0.2
SCN1B-206ENST00000638536 STRAPQ9Y3F4 350 aaKnown RBP16.28■□□□□ 0.2
SCN1B-206ENST00000638536 IGKV3-7A0A075B6H7 116 aa16.27■□□□□ 0.2
SCN1B-206ENST00000638536 C5orf51A6NDU8 294 aa16.27■□□□□ 0.2
SCN1B-206ENST00000638536 A8MZ25 164 aa16.27■□□□□ 0.2
SCN1B-206ENST00000638536 USF2Q15853 346 aaPredicted RBP16.27■□□□□ 0.2
SCN1B-206ENST00000638536 SLC35E1Q96K37 410 aa16.27■□□□□ 0.2
SCN1B-206ENST00000638536 MARVELD1Q9BSK0 173 aa16.27■□□□□ 0.2
SCN1B-206ENST00000638536 OR11H12B2RN74 326 aa16.27■□□□□ 0.19
SCN1B-206ENST00000638536 PSG1P11464 419 aa16.27■□□□□ 0.19
SCN1B-206ENST00000638536 CRYBB3P26998 211 aa16.27■□□□□ 0.19
SCN1B-206ENST00000638536 RPP30P78346 268 aaKnown RBP16.27■□□□□ 0.19
SCN1B-206ENST00000638536 Q8WTZ3 238 aa16.27■□□□□ 0.19
SCN1B-206ENST00000638536 C7orf66A4D0T2 115 aa16.26■□□□□ 0.19
SCN1B-206ENST00000638536 TOMM40O96008 361 aa16.26■□□□□ 0.19
SCN1B-206ENST00000638536 NPPCP23582 126 aa16.26■□□□□ 0.19
SCN1B-206ENST00000638536 DEFA1P59665 94 aa16.26■□□□□ 0.19
SCN1B-206ENST00000638536 DEFA3P59666 94 aa16.26■□□□□ 0.19
SCN1B-206ENST00000638536 IL15RAQ13261 267 aa16.26■□□□□ 0.19
SCN1B-206ENST00000638536 SPAG8Q99932 426 aaPredicted RBP16.26■□□□□ 0.19
SCN1B-206ENST00000638536 ZFP92A6NM28 416 aa16.25■□□□□ 0.19
SCN1B-206ENST00000638536 SCGB2A1O75556 95 aa16.25■□□□□ 0.19
SCN1B-206ENST00000638536 DFFBO76075 338 aa16.25■□□□□ 0.19
SCN1B-206ENST00000638536 IL4P05112 153 aa16.25■□□□□ 0.19
SCN1B-206ENST00000638536 RD3LP0DJH9 198 aa16.25■□□□□ 0.19
SCN1B-206ENST00000638536 LAMTOR1Q6IAA8 161 aa16.25■□□□□ 0.19
SCN1B-206ENST00000638536 OR8G2PQ6IF36 304 aa16.25■□□□□ 0.19
SCN1B-206ENST00000638536 TMEM14EPQ6UXP3 125 aa16.25■□□□□ 0.19
SCN1B-206ENST00000638536 C2orf50Q96LR7 162 aa16.25■□□□□ 0.19
SCN1B-206ENST00000638536 CITED4Q96RK1 184 aa16.25■□□□□ 0.19
SCN1B-206ENST00000638536 UBQLN2Q9UHD9 624 aa16.25■□□□□ 0.19
SCN1B-206ENST00000638536 LSM5Q9Y4Y9 91 aaKnown RBP16.25■□□□□ 0.19
SCN1B-206ENST00000638536 K7EPK0 472 aa16.24■□□□□ 0.19
SCN1B-206ENST00000638536 SIX6O95475 246 aa16.24■□□□□ 0.19
SCN1B-206ENST00000638536 METTL15P1P0C7V9 234 aa16.24■□□□□ 0.19
SCN1B-206ENST00000638536 TFPI2P48307 235 aa16.24■□□□□ 0.19
SCN1B-206ENST00000638536 ACOT7LQ6ZUV0 252 aa16.24■□□□□ 0.19
SCN1B-206ENST00000638536 TCF24Q7RTU0 167 aa16.24■□□□□ 0.19
SCN1B-206ENST00000638536 GBGT1Q8N5D6 347 aa16.24■□□□□ 0.19
SCN1B-206ENST00000638536 METTL26Q96S19 204 aa16.24■□□□□ 0.19
SCN1B-206ENST00000638536 RAB40CQ96S21 281 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms