RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 MED13LQ71F56 2210 aa4.4□□□□□ -1.7
NEK3-211ENST00000629912 TRAV5A0A0B4J249 113 aa4.4□□□□□ -1.71
NEK3-211ENST00000629912 CENPVL3A0A0U1RRI6 287 aa4.4□□□□□ -1.71
NEK3-211ENST00000629912 SCO2A0A1W2PP80 73 aa4.4□□□□□ -1.71
NEK3-211ENST00000629912 A0A1W2PRD5 423 aa4.4□□□□□ -1.71
NEK3-211ENST00000629912 A0A1W2PRF3 423 aa4.4□□□□□ -1.71
NEK3-211ENST00000629912 A0A1W2PRM7 423 aa4.4□□□□□ -1.71
NEK3-211ENST00000629912 HELTA6NFD8 242 aa4.4□□□□□ -1.71
NEK3-211ENST00000629912 C5orf52A6NGY3 159 aa4.4□□□□□ -1.71
NEK3-211ENST00000629912 H7BYZ3 331 aa4.4□□□□□ -1.71
NEK3-211ENST00000629912 K7EIM0 57 aa4.4□□□□□ -1.71
NEK3-211ENST00000629912 NPFFO15130 113 aa4.4□□□□□ -1.71
NEK3-211ENST00000629912 OR7C2O60412 319 aa4.4□□□□□ -1.71
NEK3-211ENST00000629912 HLA-DRB1P01911 266 aa4.4□□□□□ -1.71
NEK3-211ENST00000629912 FABP1P07148 127 aa4.4□□□□□ -1.71
NEK3-211ENST00000629912 IGLC1P0CG04 106 aa4.4□□□□□ -1.71
NEK3-211ENST00000629912 EGR2P11161 476 aaPredicted RBP4.4□□□□□ -1.71
NEK3-211ENST00000629912 TMEM11P17152 192 aa4.4□□□□□ -1.71
NEK3-211ENST00000629912 SRP14P37108 136 aaKnown RBP4.4□□□□□ -1.71
NEK3-211ENST00000629912 RPS10P46783 165 aaKnown RBP4.4□□□□□ -1.71
NEK3-211ENST00000629912 TAS2R60P59551 318 aa4.4□□□□□ -1.71
NEK3-211ENST00000629912 YPEL3P61236 119 aaPredicted RBP4.4□□□□□ -1.71
NEK3-211ENST00000629912 SUMO1P63165 101 aaKnown RBP4.4□□□□□ -1.71
NEK3-211ENST00000629912 FOXL1Q12952 345 aa4.4□□□□□ -1.71
NEK3-211ENST00000629912 HES1Q14469 280 aa4.4□□□□□ -1.71
NEK3-211ENST00000629912 SMUG1Q53HV7 270 aa4.4□□□□□ -1.71
NEK3-211ENST00000629912 ASPHD1Q5U4P2 390 aa4.4□□□□□ -1.71
NEK3-211ENST00000629912 CLEC2AQ6UVW9 174 aa4.4□□□□□ -1.71
NEK3-211ENST00000629912 C16orf82Q7Z2V1 217 aa4.4□□□□□ -1.71
NEK3-211ENST00000629912 LINC00305Q7Z4B0 112 aa4.4□□□□□ -1.71
NEK3-211ENST00000629912 ZNF843Q8N446 348 aa4.4□□□□□ -1.71
NEK3-211ENST00000629912 Q8N9W7 124 aa4.4□□□□□ -1.71
NEK3-211ENST00000629912 BTF3L4Q96K17 158 aa4.4□□□□□ -1.71
NEK3-211ENST00000629912 FAM210BQ96KR6 192 aa4.4□□□□□ -1.71
NEK3-211ENST00000629912 TMEM68Q96MH6 324 aa4.4□□□□□ -1.71
NEK3-211ENST00000629912 FANCD2OSQ96PS1 177 aa4.4□□□□□ -1.71
NEK3-211ENST00000629912 OR5B12Q96R08 314 aa4.4□□□□□ -1.71
NEK3-211ENST00000629912 CCL19Q99731 98 aa4.4□□□□□ -1.71
NEK3-211ENST00000629912 TXN2Q99757 166 aa4.4□□□□□ -1.71
NEK3-211ENST00000629912 PAXXQ9BUH6 204 aa4.4□□□□□ -1.71
NEK3-211ENST00000629912 MEGF9Q9H1U4 602 aa4.4□□□□□ -1.71
NEK3-211ENST00000629912 ZNF355PQ9NSJ1 428 aa4.4□□□□□ -1.71
NEK3-211ENST00000629912 MRPL27Q9P0M9 148 aaKnown RBP4.4□□□□□ -1.71
NEK3-211ENST00000629912 ABCA1O95477 2261 aa4.4□□□□□ -1.71
NEK3-211ENST00000629912 TACC2O95359 2948 aa4.39□□□□□ -1.71
NEK3-211ENST00000629912 CFAP46Q8IYW2 2715 aa4.39□□□□□ -1.71
NEK3-211ENST00000629912 TRBV20OR9-2A0A075B6H5 130 aa4.39□□□□□ -1.71
NEK3-211ENST00000629912 IGLV11-55A0A075B6I3 123 aa4.39□□□□□ -1.71
NEK3-211ENST00000629912 TRAV9-1A0A075B6T8 112 aa4.39□□□□□ -1.71
NEK3-211ENST00000629912 TGIF2-C20orf24A0A0A6YYL0 155 aa4.39□□□□□ -1.71
NEK3-211ENST00000629912 IGHV1-69DA0A0B4J2H0 117 aa4.39□□□□□ -1.71
NEK3-211ENST00000629912 IGHV4-61A0A0C4DH41 118 aa4.39□□□□□ -1.71
NEK3-211ENST00000629912 WI2-2373I1.2A0A1W2PRP0 233 aa4.39□□□□□ -1.71
NEK3-211ENST00000629912 NCBP2LA6PVI3 153 aaKnown RBP4.39□□□□□ -1.71
NEK3-211ENST00000629912 GGCTO75223 188 aaKnown RBP4.39□□□□□ -1.71
NEK3-211ENST00000629912 IGKV1-17P01599 117 aa4.39□□□□□ -1.71
NEK3-211ENST00000629912 IGHV1-69P01742 117 aa4.39□□□□□ -1.71
NEK3-211ENST00000629912 IGHV3-48P01763 117 aa4.39□□□□□ -1.71
NEK3-211ENST00000629912 TYMSP04818 313 aa4.39□□□□□ -1.71
NEK3-211ENST00000629912 RD3LP0DJH9 198 aa4.39□□□□□ -1.71
NEK3-211ENST00000629912 PSG1P11464 419 aa4.39□□□□□ -1.71
NEK3-211ENST00000629912 HIST1H1BP16401 226 aaKnown RBP4.39□□□□□ -1.71
NEK3-211ENST00000629912 ORM2P19652 201 aa4.39□□□□□ -1.71
NEK3-211ENST00000629912 CD24P25063 80 aa4.39□□□□□ -1.71
NEK3-211ENST00000629912 S100PP25815 95 aa4.39□□□□□ -1.71
NEK3-211ENST00000629912 CRYBB3P26998 211 aa4.39□□□□□ -1.71
NEK3-211ENST00000629912 FCGR2BP31994 310 aaPredicted RBP4.39□□□□□ -1.71
NEK3-211ENST00000629912 MYCNOSP40205 109 aa4.39□□□□□ -1.71
NEK3-211ENST00000629912 GALR1P47211 349 aa4.39□□□□□ -1.71
NEK3-211ENST00000629912 MFAP4P55083 255 aa4.39□□□□□ -1.71
NEK3-211ENST00000629912 ATP5J2P56134 94 aa4.39□□□□□ -1.71
NEK3-211ENST00000629912 KIAA0141Q14154 515 aaPredicted RBP4.39□□□□□ -1.71
NEK3-211ENST00000629912 FBLN7Q53RD9 439 aa4.39□□□□□ -1.71
NEK3-211ENST00000629912 FAM120AOSQ5T036 256 aa4.39□□□□□ -1.71
NEK3-211ENST00000629912 MORN5Q5VZ52 161 aa4.39□□□□□ -1.71
NEK3-211ENST00000629912 OR5AU1Q8NGC0 362 aa4.39□□□□□ -1.71
NEK3-211ENST00000629912 C2CD4CQ8TF44 421 aa4.39□□□□□ -1.71
NEK3-211ENST00000629912 ARPC1AQ92747 370 aa4.39□□□□□ -1.71
NEK3-211ENST00000629912 FXYD5Q96DB9 178 aa4.39□□□□□ -1.71
NEK3-211ENST00000629912 BBC3Q96PG8 261 aaPredicted RBP4.39□□□□□ -1.71
NEK3-211ENST00000629912 DERL1Q9BUN8 251 aa4.39□□□□□ -1.71
NEK3-211ENST00000629912 ELOVL1Q9BW60 279 aa4.39□□□□□ -1.71
NEK3-211ENST00000629912 SRD5A3Q9H8P0 318 aa4.39□□□□□ -1.71
NEK3-211ENST00000629912 THYN1Q9P016 225 aa4.39□□□□□ -1.71
NEK3-211ENST00000629912 TMEM14CQ9P0S9 112 aa4.39□□□□□ -1.71
NEK3-211ENST00000629912 RNF24Q9Y225 148 aa4.39□□□□□ -1.71
NEK3-211ENST00000629912 DOPEY1Q5JWR5 2465 aa4.39□□□□□ -1.71
NEK3-211ENST00000629912 IGHV7-81A0A0B4J1V7 117 aa4.38□□□□□ -1.71
NEK3-211ENST00000629912 GGTLC3B5MD39 225 aa4.38□□□□□ -1.71
NEK3-211ENST00000629912 AP4M1O00189 453 aa4.38□□□□□ -1.71
NEK3-211ENST00000629912 UBE2CO00762 179 aa4.38□□□□□ -1.71
NEK3-211ENST00000629912 PHOX2AO14813 284 aa4.38□□□□□ -1.71
NEK3-211ENST00000629912 TOMM40O96008 361 aa4.38□□□□□ -1.71
NEK3-211ENST00000629912 GCGP01275 180 aa4.38□□□□□ -1.71
NEK3-211ENST00000629912 S100A9P06702 114 aaKnown RBP4.38□□□□□ -1.71
NEK3-211ENST00000629912 S100A6P06703 90 aa4.38□□□□□ -1.71
NEK3-211ENST00000629912 OR10J4P0C629 311 aa4.38□□□□□ -1.71
NEK3-211ENST00000629912 NBEAP1P0C6P0 100 aa4.38□□□□□ -1.71
NEK3-211ENST00000629912 RNF224P0DH78 156 aa4.38□□□□□ -1.71
NEK3-211ENST00000629912 APELAP0DMC3 54 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms