RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 SPSB3Q6PJ21 355 aa15.27■□□□□ 0.04
PDLIM2-221ENST00000622702 C8orf86Q6ZUL3 223 aa15.27■□□□□ 0.04
PDLIM2-221ENST00000622702 TMEM144Q7Z5S9 345 aa15.27■□□□□ 0.04
PDLIM2-221ENST00000622702 HYLS1Q96M11 299 aa15.27■□□□□ 0.04
PDLIM2-221ENST00000622702 MFFQ9GZY8 342 aa15.27■□□□□ 0.04
PDLIM2-221ENST00000622702 NPVFQ9HCQ7 196 aa15.27■□□□□ 0.04
PDLIM2-221ENST00000622702 UQCC1Q9NVA1 299 aa15.27■□□□□ 0.04
PDLIM2-221ENST00000622702 WNK1Q9H4A3 2382 aa15.27■□□□□ 0.04
PDLIM2-221ENST00000622702 FBN3Q75N90 2809 aa15.27■□□□□ 0.03
PDLIM2-221ENST00000622702 TRAV30A0A087WSZ9 112 aa15.27■□□□□ 0.03
PDLIM2-221ENST00000622702 CTSGP08311 255 aa15.27■□□□□ 0.03
PDLIM2-221ENST00000622702 IGLC1P0CG04 106 aa15.27■□□□□ 0.03
PDLIM2-221ENST00000622702 AKR1C1Q04828 323 aa15.27■□□□□ 0.03
PDLIM2-221ENST00000622702 OR2F1Q13607 317 aa15.27■□□□□ 0.03
PDLIM2-221ENST00000622702 ZNF345Q14585 488 aa15.27■□□□□ 0.03
PDLIM2-221ENST00000622702 ZFP69Q49AA0 526 aa15.27■□□□□ 0.03
PDLIM2-221ENST00000622702 THAP8Q8NA92 274 aa15.27■□□□□ 0.03
PDLIM2-221ENST00000622702 MGAM2Q2M2H8 2515 aa15.26■□□□□ 0.03
PDLIM2-221ENST00000622702 SMCO3A2RU48 225 aa15.26■□□□□ 0.03
PDLIM2-221ENST00000622702 BMPR1BO00238 502 aa15.26■□□□□ 0.03
PDLIM2-221ENST00000622702 ADMP35318 185 aa15.26■□□□□ 0.03
PDLIM2-221ENST00000622702 ARL3P36405 182 aa15.26■□□□□ 0.03
PDLIM2-221ENST00000622702 CLINT1Q14677 625 aa15.26■□□□□ 0.03
PDLIM2-221ENST00000622702 DEFB136Q30KP8 78 aa15.26■□□□□ 0.03
PDLIM2-221ENST00000622702 CHRDL1Q9BU40 450 aa15.26■□□□□ 0.03
PDLIM2-221ENST00000622702 FBXL17Q9UF56 701 aa15.26■□□□□ 0.03
PDLIM2-221ENST00000622702 IGHV4OR15-8A0A075B7B6 117 aa15.25■□□□□ 0.03
PDLIM2-221ENST00000622702 IGKV1OR2-108A0A075B7D4 117 aa15.25■□□□□ 0.03
PDLIM2-221ENST00000622702 A0A087WW49 117 aa15.25■□□□□ 0.03
PDLIM2-221ENST00000622702 PPP5D1E7EU14 171 aa15.25■□□□□ 0.03
PDLIM2-221ENST00000622702 NUPL2O15504 423 aaKnown RBP15.25■□□□□ 0.03
PDLIM2-221ENST00000622702 GGCTO75223 188 aaKnown RBP15.25■□□□□ 0.03
PDLIM2-221ENST00000622702 SCGB2A1O75556 95 aa15.25■□□□□ 0.03
PDLIM2-221ENST00000622702 DFFBO76075 338 aa15.25■□□□□ 0.03
PDLIM2-221ENST00000622702 IGKV1-17P01599 117 aa15.25■□□□□ 0.03
PDLIM2-221ENST00000622702 OR10J1P30954 320 aa15.25■□□□□ 0.03
PDLIM2-221ENST00000622702 FHL3Q13643 280 aa15.25■□□□□ 0.03
PDLIM2-221ENST00000622702 OR11H1Q8NG94 326 aa15.25■□□□□ 0.03
PDLIM2-221ENST00000622702 OR4F17Q8NGA8 305 aa15.25■□□□□ 0.03
PDLIM2-221ENST00000622702 OR1N2Q8NGR9 330 aa15.25■□□□□ 0.03
PDLIM2-221ENST00000622702 RAX2Q96IS3 184 aa15.25■□□□□ 0.03
PDLIM2-221ENST00000622702 OR4F4Q96R69 305 aa15.25■□□□□ 0.03
PDLIM2-221ENST00000622702 ATP5SQ99766 215 aa15.25■□□□□ 0.03
PDLIM2-221ENST00000622702 LSM4Q9Y4Z0 139 aaKnown RBP15.25■□□□□ 0.03
PDLIM2-221ENST00000622702 IGKV1D-37A0A075B6S9 117 aa15.24■□□□□ 0.03
PDLIM2-221ENST00000622702 CCL24O00175 119 aa15.24■□□□□ 0.03
PDLIM2-221ENST00000622702 AP2S1P53680 142 aaPredicted RBP15.24■□□□□ 0.03
PDLIM2-221ENST00000622702 ZNF616Q08AN1 781 aa15.24■□□□□ 0.03
PDLIM2-221ENST00000622702 KCNRGQ8N5I3 272 aa15.24■□□□□ 0.03
PDLIM2-221ENST00000622702 SMIM3Q9BZL3 60 aa15.24■□□□□ 0.03
PDLIM2-221ENST00000622702 WDR83OSQ9Y284 106 aa15.24■□□□□ 0.03
PDLIM2-221ENST00000622702 ZFP92A6NM28 416 aa15.23■□□□□ 0.03
PDLIM2-221ENST00000622702 LINC01619G3V211 115 aa15.23■□□□□ 0.03
PDLIM2-221ENST00000622702 CXCL2P19875 107 aa15.23■□□□□ 0.03
PDLIM2-221ENST00000622702 ZP3P21754 424 aa15.23■□□□□ 0.03
PDLIM2-221ENST00000622702 TEPPQ6URK8 271 aa15.23■□□□□ 0.03
PDLIM2-221ENST00000622702 DPF1Q92782 380 aa15.23■□□□□ 0.03
PDLIM2-221ENST00000622702 TRGV9Q99603 122 aa15.23■□□□□ 0.03
PDLIM2-221ENST00000622702 WFDC1Q9HC57 220 aa15.23■□□□□ 0.03
PDLIM2-221ENST00000622702 A0A0D9SG52 128 aa15.22■□□□□ 0.03
PDLIM2-221ENST00000622702 UBE2L5PA0A1B0GUS4 154 aa15.22■□□□□ 0.03
PDLIM2-221ENST00000622702 MYCNOSP40205 109 aa15.22■□□□□ 0.03
PDLIM2-221ENST00000622702 EIF2B2P49770 351 aaKnown RBP15.22■□□□□ 0.03
PDLIM2-221ENST00000622702 YPEL3P61236 119 aaPredicted RBP15.22■□□□□ 0.03
PDLIM2-221ENST00000622702 TIGITQ495A1 244 aa15.22■□□□□ 0.03
PDLIM2-221ENST00000622702 RELQ04864 619 aaPredicted RBP15.21■□□□□ 0.03
PDLIM2-221ENST00000622702 RPEL1Q2QD12 228 aa15.21■□□□□ 0.03
PDLIM2-221ENST00000622702 ZNF414Q96IQ9 312 aa15.21■□□□□ 0.03
PDLIM2-221ENST00000622702 DUX3Q96PT4 197 aa15.21■□□□□ 0.03
PDLIM2-221ENST00000622702 TAAR5O14804 337 aa15.2■□□□□ 0.02
PDLIM2-221ENST00000622702 MPDU1O75352 247 aa15.2■□□□□ 0.02
PDLIM2-221ENST00000622702 OR2C1O95371 312 aa15.2■□□□□ 0.02
PDLIM2-221ENST00000622702 HOXD3P31249 432 aaPredicted RBP15.2■□□□□ 0.02
PDLIM2-221ENST00000622702 ZNF266Q14584 549 aa15.2■□□□□ 0.02
PDLIM2-221ENST00000622702 BTNL8Q6UX41 500 aa15.2■□□□□ 0.02
PDLIM2-221ENST00000622702 GPHB5Q86YW7 130 aa15.2■□□□□ 0.02
PDLIM2-221ENST00000622702 PARD6GQ9BYG4 376 aaPredicted RBP15.2■□□□□ 0.02
PDLIM2-221ENST00000622702 WDR61Q9GZS3 305 aaKnown RBP15.2■□□□□ 0.02
PDLIM2-221ENST00000622702 IFNA5P01569 189 aa15.2■□□□□ 0.02
PDLIM2-221ENST00000622702 FABP1P07148 127 aa15.2■□□□□ 0.02
PDLIM2-221ENST00000622702 LGALSLQ3ZCW2 172 aaPredicted RBP15.2■□□□□ 0.02
PDLIM2-221ENST00000622702 ZNF600Q6ZNG1 722 aa15.2■□□□□ 0.02
PDLIM2-221ENST00000622702 MGST2Q99735 147 aa15.2■□□□□ 0.02
PDLIM2-221ENST00000622702 NDUFA4O00483 81 aa15.19■□□□□ 0.02
PDLIM2-221ENST00000622702 TOMM40O96008 361 aa15.19■□□□□ 0.02
PDLIM2-221ENST00000622702 PF4P02776 101 aa15.19■□□□□ 0.02
PDLIM2-221ENST00000622702 FGF7P21781 194 aa15.19■□□□□ 0.02
PDLIM2-221ENST00000622702 ZNF90Q03938 601 aa15.19■□□□□ 0.02
PDLIM2-221ENST00000622702 RAB31Q13636 194 aa15.19■□□□□ 0.02
PDLIM2-221ENST00000622702 KLF5Q13887 457 aaPredicted RBP15.19■□□□□ 0.02
PDLIM2-221ENST00000622702 IGHV3-35A0A0C4DH35 117 aa15.18■□□□□ 0.02
PDLIM2-221ENST00000622702 AGPAT2O15120 278 aa15.18■□□□□ 0.02
PDLIM2-221ENST00000622702 RD3LP0DJH9 198 aa15.18■□□□□ 0.02
PDLIM2-221ENST00000622702 SLURP1P55000 103 aa15.18■□□□□ 0.02
PDLIM2-221ENST00000622702 SELENOTP62341 195 aa15.18■□□□□ 0.02
PDLIM2-221ENST00000622702 FAM106AQ4KMX7 169 aa15.18■□□□□ 0.02
PDLIM2-221ENST00000622702 CYP2G1PQ6ZSU1 146 aa15.18■□□□□ 0.02
PDLIM2-221ENST00000622702 TMUB2Q71RG4 321 aa15.18■□□□□ 0.02
PDLIM2-221ENST00000622702 C9orf62Q8N4C0 152 aa15.18■□□□□ 0.02
PDLIM2-221ENST00000622702 Q8WTZ3 238 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms