RNA–Protein interactions for RNA: ENST00000617771.5

VEGFA-228, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-228ENST00000617771 DFFBO76075 338 aa18.64■□□□□ 0.57
VEGFA-228ENST00000617771 IGKV1-17P01599 117 aa18.64■□□□□ 0.57
VEGFA-228ENST00000617771 TIGITQ495A1 244 aa18.64■□□□□ 0.57
VEGFA-228ENST00000617771 LYZL2Q7Z4W2 148 aa18.64■□□□□ 0.57
VEGFA-228ENST00000617771 LILRB2Q8N423 598 aa18.64■□□□□ 0.57
VEGFA-228ENST00000617771 MS4A6AQ9H2W1 248 aa18.64■□□□□ 0.57
VEGFA-228ENST00000617771 MAP6D1Q9H9H5 199 aa18.64■□□□□ 0.57
VEGFA-228ENST00000617771 TRAV2A0A0B4J234 112 aa18.63■□□□□ 0.57
VEGFA-228ENST00000617771 CRYBB3P26998 211 aa18.63■□□□□ 0.57
VEGFA-228ENST00000617771 RND2P52198 227 aa18.63■□□□□ 0.57
VEGFA-228ENST00000617771 TNFRSF9Q07011 255 aa18.63■□□□□ 0.57
VEGFA-228ENST00000617771 PRSS54Q6PEW0 395 aa18.63■□□□□ 0.57
VEGFA-228ENST00000617771 TMED4Q7Z7H5 227 aa18.63■□□□□ 0.57
VEGFA-228ENST00000617771 DEDD2Q8WXF8 326 aa18.63■□□□□ 0.57
VEGFA-228ENST00000617771 HSPB7Q9UBY9 170 aa18.63■□□□□ 0.57
VEGFA-228ENST00000617771 IGLC1P0CG04 106 aa18.62■□□□□ 0.57
VEGFA-228ENST00000617771 ZNF124Q15973 351 aa18.62■□□□□ 0.57
VEGFA-228ENST00000617771 DTD1Q8TEA8 209 aa18.62■□□□□ 0.57
VEGFA-228ENST00000617771 RNF183Q96D59 192 aa18.62■□□□□ 0.57
VEGFA-228ENST00000617771 U3KQ87 197 aa18.62■□□□□ 0.57
VEGFA-228ENST00000617771 IFNA10P01566 189 aa18.61■□□□□ 0.57
VEGFA-228ENST00000617771 OR10J1P30954 320 aa18.61■□□□□ 0.57
VEGFA-228ENST00000617771 ZNF79Q15937 498 aa18.61■□□□□ 0.57
VEGFA-228ENST00000617771 TMEM128Q5BJH2 165 aa18.61■□□□□ 0.57
VEGFA-228ENST00000617771 CCDC190Q86UF4 302 aa18.61■□□□□ 0.57
VEGFA-228ENST00000617771 Q8WTZ3 238 aa18.61■□□□□ 0.57
VEGFA-228ENST00000617771 TMEM170AQ8WVE7 144 aa18.61■□□□□ 0.57
VEGFA-228ENST00000617771 GRAMD2BQ96HH9 432 aa18.61■□□□□ 0.57
VEGFA-228ENST00000617771 RBM38Q9H0Z9 239 aaKnown RBP18.61■□□□□ 0.57
VEGFA-228ENST00000617771 DUXBA0A1W2PPF3 345 aa18.6■□□□□ 0.57
VEGFA-228ENST00000617771 ZNF701M0R085 212 aaPredicted RBP18.6■□□□□ 0.57
VEGFA-228ENST00000617771 YPEL3P61236 119 aaPredicted RBP18.6■□□□□ 0.57
VEGFA-228ENST00000617771 OR1S1Q8NH92 325 aa18.6■□□□□ 0.57
VEGFA-228ENST00000617771 SLC25A21Q9BQT8 299 aaPredicted RBP18.6■□□□□ 0.57
VEGFA-228ENST00000617771 CSTL1Q9H114 145 aa18.6■□□□□ 0.57
VEGFA-228ENST00000617771 RBKSQ9H477 322 aa18.6■□□□□ 0.57
VEGFA-228ENST00000617771 RABAC1Q9UI14 185 aa18.6■□□□□ 0.57
VEGFA-228ENST00000617771 A0A0J9YWU9 116 aa18.59■□□□□ 0.57
VEGFA-228ENST00000617771 P2RY1P47900 373 aa18.59■□□□□ 0.57
VEGFA-228ENST00000617771 LYG2Q86SG7 212 aa18.59■□□□□ 0.57
VEGFA-228ENST00000617771 SACSQ9NZJ4 4579 aa18.59■□□□□ 0.57
VEGFA-228ENST00000617771 TENM2Q9NT68 2774 aa18.59■□□□□ 0.57
VEGFA-228ENST00000617771 MPTX1A8MV57 137 aa18.58■□□□□ 0.56
VEGFA-228ENST00000617771 JTBO76095 146 aa18.58■□□□□ 0.56
VEGFA-228ENST00000617771 ATP5IP56385 69 aaPredicted RBP18.58■□□□□ 0.56
VEGFA-228ENST00000617771 SPANXN2Q5MJ10 180 aa18.58■□□□□ 0.56
VEGFA-228ENST00000617771 NPIPB3Q92617 1050 aa18.58■□□□□ 0.56
VEGFA-228ENST00000617771 ACY3Q96HD9 319 aa18.58■□□□□ 0.56
VEGFA-228ENST00000617771 VAMP1P23763 118 aa18.57■□□□□ 0.56
VEGFA-228ENST00000617771 EIF2B2P49770 351 aaKnown RBP18.57■□□□□ 0.56
VEGFA-228ENST00000617771 DEFB131AP59861 70 aa18.57■□□□□ 0.56
VEGFA-228ENST00000617771 STXBP6Q8NFX7 210 aa18.57■□□□□ 0.56
VEGFA-228ENST00000617771 HNRNPCP07910 306 aaKnown RBP eCLIP18.56■□□□□ 0.56
VEGFA-228ENST00000617771 IFNA4P05014 189 aa18.55■□□□□ 0.56
VEGFA-228ENST00000617771 RBMS2Q15434 407 aaKnown RBP18.55■□□□□ 0.56
VEGFA-228ENST00000617771 FAM24BQ8N5W8 94 aa18.55■□□□□ 0.56
VEGFA-228ENST00000617771 TMEM217Q8N7C4 229 aa18.55■□□□□ 0.56
VEGFA-228ENST00000617771 LRTM2Q8N967 370 aa18.55■□□□□ 0.56
VEGFA-228ENST00000617771 GATAD1Q8WUU5 269 aa18.55■□□□□ 0.56
VEGFA-228ENST00000617771 U3KQE9 123 aa18.55■□□□□ 0.56
VEGFA-228ENST00000617771 RYR2Q92736 4967 aa18.55■□□□□ 0.56
VEGFA-228ENST00000617771 HELTA6NFD8 242 aa18.54■□□□□ 0.56
VEGFA-228ENST00000617771 K7EQG2 157 aa18.54■□□□□ 0.56
VEGFA-228ENST00000617771 TOMM40O96008 361 aa18.54■□□□□ 0.56
VEGFA-228ENST00000617771 IL4P05112 153 aa18.54■□□□□ 0.56
VEGFA-228ENST00000617771 RD3LP0DJH9 198 aa18.54■□□□□ 0.56
VEGFA-228ENST00000617771 LEMD1Q68G75 181 aa18.54■□□□□ 0.56
VEGFA-228ENST00000617771 CXorf65A6NEN9 183 aa18.53■□□□□ 0.56
VEGFA-228ENST00000617771 PITX3O75364 302 aa18.53■□□□□ 0.56
VEGFA-228ENST00000617771 SLC25A6P12236 298 aa18.53■□□□□ 0.56
VEGFA-228ENST00000617771 ATF4P18848 351 aaPredicted RBP18.53■□□□□ 0.56
VEGFA-228ENST00000617771 INPP1P49441 399 aa18.53■□□□□ 0.56
VEGFA-228ENST00000617771 STHQ8IWL8 128 aa18.53■□□□□ 0.56
VEGFA-228ENST00000617771 CENPSQ8N2Z9 138 aa18.53■□□□□ 0.56
VEGFA-228ENST00000617771 SRRQ9GZT4 340 aa18.53■□□□□ 0.56
VEGFA-228ENST00000617771 TMED3Q9Y3Q3 217 aa18.53■□□□□ 0.56
VEGFA-228ENST00000617771 SFT2D2O95562 160 aa18.52■□□□□ 0.56
VEGFA-228ENST00000617771 CA1P00915 261 aaPredicted RBP18.52■□□□□ 0.56
VEGFA-228ENST00000617771 GPX4P36969 197 aaPredicted RBP18.52■□□□□ 0.56
VEGFA-228ENST00000617771 AP2S1P53680 142 aaPredicted RBP18.52■□□□□ 0.56
VEGFA-228ENST00000617771 PPP1R1AQ13522 171 aa18.52■□□□□ 0.56
VEGFA-228ENST00000617771 PMS2P11Q13670 270 aa18.52■□□□□ 0.56
VEGFA-228ENST00000617771 C16orf54Q6UWD8 224 aa18.52■□□□□ 0.56
VEGFA-228ENST00000617771 SLC35E1Q96K37 410 aa18.52■□□□□ 0.56
VEGFA-228ENST00000617771 FAM90A26D6RGX4 464 aa18.51■□□□□ 0.55
VEGFA-228ENST00000617771 RAB11AP62491 216 aa18.51■□□□□ 0.55
VEGFA-228ENST00000617771 USF2Q15853 346 aaPredicted RBP18.51■□□□□ 0.55
VEGFA-228ENST00000617771 TRIQKQ629K1 86 aa18.51■□□□□ 0.55
VEGFA-228ENST00000617771 DCANP1Q8TF63 244 aa18.51■□□□□ 0.55
VEGFA-228ENST00000617771 GLMPQ8WWB7 406 aa18.51■□□□□ 0.55
VEGFA-228ENST00000617771 RARRES2Q99969 163 aa18.51■□□□□ 0.55
VEGFA-228ENST00000617771 MED6O75586 246 aa18.5■□□□□ 0.55
VEGFA-228ENST00000617771 PSG1P11464 419 aa18.5■□□□□ 0.55
VEGFA-228ENST00000617771 UBE2MP61081 183 aaKnown RBP18.5■□□□□ 0.55
VEGFA-228ENST00000617771 EWSR1Q01844 656 aaKnown RBP eCLIP18.5■□□□□ 0.553e-7■■■□□ 16.8
VEGFA-228ENST00000617771 NUPR2A6NF83 97 aa18.49■□□□□ 0.55
VEGFA-228ENST00000617771 NAP1L6A6NFF2 107 aa18.49■□□□□ 0.55
VEGFA-228ENST00000617771 ZNF688P0C7X2 276 aa18.49■□□□□ 0.55
VEGFA-228ENST00000617771 IAPPP10997 89 aa18.49■□□□□ 0.55
VEGFA-228ENST00000617771 DHRS2Q13268 280 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 189.9 ms