RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 RUNX1Q01196 453 aa14.44□□□□□ -0.1
SSBP4-212ENST00000601919 DEFA5Q01523 94 aa14.44□□□□□ -0.1
SSBP4-212ENST00000601919 TEX261Q6UWH6 196 aa14.44□□□□□ -0.1
SSBP4-212ENST00000601919 MGST2Q99735 147 aa14.44□□□□□ -0.1
SSBP4-212ENST00000601919 GGTLC1Q9BX51 225 aa14.44□□□□□ -0.1
SSBP4-212ENST00000601919 SLC25A32Q9H2D1 315 aa14.44□□□□□ -0.1
SSBP4-212ENST00000601919 S4R3C0 116 aa14.44□□□□□ -0.1
SSBP4-212ENST00000601919 IGLC1P0CG04 106 aa14.43□□□□□ -0.1
SSBP4-212ENST00000601919 RPL29P47914 159 aaKnown RBP14.43□□□□□ -0.1
SSBP4-212ENST00000601919 SPSB3Q6PJ21 355 aa14.43□□□□□ -0.1
SSBP4-212ENST00000601919 C10orf99Q6UWK7 81 aa14.43□□□□□ -0.1
SSBP4-212ENST00000601919 CYP2G1PQ6ZSU1 146 aa14.43□□□□□ -0.1
SSBP4-212ENST00000601919 OR2G3Q8NGZ4 309 aa14.43□□□□□ -0.1
SSBP4-212ENST00000601919 MYOZ3Q8TDC0 251 aa14.43□□□□□ -0.1
SSBP4-212ENST00000601919 UBE2E2Q96LR5 201 aa14.43□□□□□ -0.1
SSBP4-212ENST00000601919 RSG1Q9BU20 258 aa14.43□□□□□ -0.1
SSBP4-212ENST00000601919 IGKV1OR2-108A0A075B7D4 117 aa14.42□□□□□ -0.1
SSBP4-212ENST00000601919 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.42□□□□□ -0.1
SSBP4-212ENST00000601919 OR2T8A6NH00 312 aa14.42□□□□□ -0.1
SSBP4-212ENST00000601919 IGHV3-23P01764 117 aa14.42□□□□□ -0.1
SSBP4-212ENST00000601919 RPLP1P05386 114 aaKnown RBP14.42□□□□□ -0.1
SSBP4-212ENST00000601919 CLEC3BP05452 202 aa14.42□□□□□ -0.1
SSBP4-212ENST00000601919 ZNF343Q6P1L6 599 aa14.42□□□□□ -0.1
SSBP4-212ENST00000601919 ZNF491Q8N8L2 437 aa14.42□□□□□ -0.1
SSBP4-212ENST00000601919 TMED6Q8WW62 240 aa14.42□□□□□ -0.1
SSBP4-212ENST00000601919 WFDC12Q8WWY7 111 aa14.42□□□□□ -0.1
SSBP4-212ENST00000601919 CCDC140Q96MF4 163 aa14.42□□□□□ -0.1
SSBP4-212ENST00000601919 SLC45A2Q9UMX9 530 aa14.42□□□□□ -0.1
SSBP4-212ENST00000601919 IGKV1D-37A0A075B6S9 117 aa14.41□□□□□ -0.1
SSBP4-212ENST00000601919 UMAD1C9J7I0 102 aa14.41□□□□□ -0.1
SSBP4-212ENST00000601919 F8W735 103 aaPredicted RBP14.41□□□□□ -0.1
SSBP4-212ENST00000601919 TSPAN15O95858 294 aa14.41□□□□□ -0.1
SSBP4-212ENST00000601919 CFDP00746 253 aaPredicted RBP14.41□□□□□ -0.1
SSBP4-212ENST00000601919 MBP02144 154 aa14.41□□□□□ -0.1
SSBP4-212ENST00000601919 GPR183P32249 361 aa14.41□□□□□ -0.1
SSBP4-212ENST00000601919 YPEL3P61236 119 aaPredicted RBP14.41□□□□□ -0.1
SSBP4-212ENST00000601919 FOXL1Q12952 345 aa14.41□□□□□ -0.1
SSBP4-212ENST00000601919 CLEC19AQ6UXS0 136 aa14.41□□□□□ -0.1
SSBP4-212ENST00000601919 Q6ZRG5 221 aa14.41□□□□□ -0.1
SSBP4-212ENST00000601919 LCNL1Q6ZST4 164 aa14.41□□□□□ -0.1
SSBP4-212ENST00000601919 ZNF680Q8NEM1 530 aa14.41□□□□□ -0.1
SSBP4-212ENST00000601919 BPIFCQ8NFQ6 507 aa14.41□□□□□ -0.1
SSBP4-212ENST00000601919 WIPF2Q8TF74 440 aaPredicted RBP14.41□□□□□ -0.1
SSBP4-212ENST00000601919 SH3BGRL3Q9H299 93 aa14.41□□□□□ -0.1
SSBP4-212ENST00000601919 PXMP4Q9Y6I8 212 aa14.41□□□□□ -0.1
SSBP4-212ENST00000601919 HAX1O00165 279 aa14.4□□□□□ -0.1
SSBP4-212ENST00000601919 TGOLN2O43493 480 aa14.4□□□□□ -0.1
SSBP4-212ENST00000601919 IGKV1-17P01599 117 aa14.4□□□□□ -0.1
SSBP4-212ENST00000601919 IGHV3-11P01762 117 aa14.4□□□□□ -0.1
SSBP4-212ENST00000601919 RD3LP0DJH9 198 aa14.4□□□□□ -0.1
SSBP4-212ENST00000601919 RAB5CP51148 216 aa14.4□□□□□ -0.1
SSBP4-212ENST00000601919 PROK1P58294 105 aa14.4□□□□□ -0.1
SSBP4-212ENST00000601919 B2MP61769 119 aa14.4□□□□□ -0.1
SSBP4-212ENST00000601919 SRSF2Q01130 221 aaKnown RBP14.4□□□□□ -0.1
SSBP4-212ENST00000601919 ZNF616Q08AN1 781 aa14.4□□□□□ -0.1
SSBP4-212ENST00000601919 KIAA0141Q14154 515 aaPredicted RBP14.4□□□□□ -0.1
SSBP4-212ENST00000601919 TIGITQ495A1 244 aa14.4□□□□□ -0.1
SSBP4-212ENST00000601919 FFAR4Q5NUL3 377 aa14.4□□□□□ -0.1
SSBP4-212ENST00000601919 AKR1C8PQ5T2L2 129 aa14.4□□□□□ -0.1
SSBP4-212ENST00000601919 ZNF767PQ75MW2 155 aa14.4□□□□□ -0.1
SSBP4-212ENST00000601919 STPG3Q8N7X2 389 aa14.4□□□□□ -0.1
SSBP4-212ENST00000601919 SLC39A9Q9NUM3 307 aa14.4□□□□□ -0.1
SSBP4-212ENST00000601919 UBQLN2Q9UHD9 624 aa14.4□□□□□ -0.1
SSBP4-212ENST00000601919 TOMM40O96008 361 aa14.39□□□□□ -0.11
SSBP4-212ENST00000601919 CTSGP08311 255 aa14.39□□□□□ -0.11
SSBP4-212ENST00000601919 ARL3P36405 182 aa14.39□□□□□ -0.11
SSBP4-212ENST00000601919 CDX1P47902 265 aaPredicted RBP14.39□□□□□ -0.11
SSBP4-212ENST00000601919 ZNF90Q03938 601 aa14.39□□□□□ -0.11
SSBP4-212ENST00000601919 RELQ04864 619 aaPredicted RBP14.39□□□□□ -0.11
SSBP4-212ENST00000601919 ACOT6Q3I5F7 207 aaPredicted RBP14.39□□□□□ -0.11
SSBP4-212ENST00000601919 PXDC1Q5TGL8 231 aa14.39□□□□□ -0.11
SSBP4-212ENST00000601919 MIC13Q5XKP0 118 aa14.39□□□□□ -0.11
SSBP4-212ENST00000601919 ALKAL2Q6UX46 152 aa14.39□□□□□ -0.11
SSBP4-212ENST00000601919 Q8WTZ3 238 aa14.39□□□□□ -0.11
SSBP4-212ENST00000601919 GNB4Q9HAV0 340 aa14.39□□□□□ -0.11
SSBP4-212ENST00000601919 PEF1Q9UBV8 284 aaKnown RBP14.39□□□□□ -0.11
SSBP4-212ENST00000601919 LGALS1P09382 135 aaKnown RBP14.38□□□□□ -0.11
SSBP4-212ENST00000601919 PRR20EP86478 221 aa14.38□□□□□ -0.11
SSBP4-212ENST00000601919 PRR20CP86479 221 aa14.38□□□□□ -0.11
SSBP4-212ENST00000601919 PRR20DP86480 221 aa14.38□□□□□ -0.11
SSBP4-212ENST00000601919 PRR20BP86481 221 aa14.38□□□□□ -0.11
SSBP4-212ENST00000601919 PRR20AP86496 221 aa14.38□□□□□ -0.11
SSBP4-212ENST00000601919 KHDC1LQ5JSQ8 128 aa14.38□□□□□ -0.11
SSBP4-212ENST00000601919 ZNF600Q6ZNG1 722 aa14.38□□□□□ -0.11
SSBP4-212ENST00000601919 TMEM182Q6ZP80 229 aaPredicted RBP14.38□□□□□ -0.11
SSBP4-212ENST00000601919 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.38□□□□□ -0.11
SSBP4-212ENST00000601919 TEP1Q99973 2627 aaKnown RBP14.37□□□□□ -0.11
SSBP4-212ENST00000601919 LINC00869P0C866 280 aa14.37□□□□□ -0.11
SSBP4-212ENST00000601919 ELLP55199 621 aaPredicted RBP14.37□□□□□ -0.11
SSBP4-212ENST00000601919 TMEM41BQ5BJD5 291 aa14.37□□□□□ -0.11
SSBP4-212ENST00000601919 DPPA3Q6W0C5 159 aa14.37□□□□□ -0.11
SSBP4-212ENST00000601919 OR51G1Q8NGK1 321 aa14.37□□□□□ -0.11
SSBP4-212ENST00000601919 LRRC20Q8TCA0 184 aa14.37□□□□□ -0.11
SSBP4-212ENST00000601919 RNF141Q8WVD5 230 aa14.37□□□□□ -0.11
SSBP4-212ENST00000601919 C19orf24Q9BVV8 132 aa14.37□□□□□ -0.11
SSBP4-212ENST00000601919 NF1P21359 2839 aa14.37□□□□□ -0.11
SSBP4-212ENST00000601919 C2CD3Q4AC94 2353 aa14.36□□□□□ -0.11
SSBP4-212ENST00000601919 ANKRD34BA5PLL1 514 aa14.36□□□□□ -0.11
SSBP4-212ENST00000601919 GGCTO75223 188 aaKnown RBP14.36□□□□□ -0.11
SSBP4-212ENST00000601919 PSG1P11464 419 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms