RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 C9orf170A2RU37 121 aa13.73□□□□□ -0.21
SHKBP1-202ENST00000593764 OR4C46A6NHA9 309 aa13.73□□□□□ -0.21
SHKBP1-202ENST00000593764 C3orf84H3BNL1 204 aa13.73□□□□□ -0.21
SHKBP1-202ENST00000593764 NPIPB3Q92617 1050 aa13.73□□□□□ -0.21
SHKBP1-202ENST00000593764 LOC102724200A0A096LPH7 203 aaPredicted RBP13.72□□□□□ -0.21
SHKBP1-202ENST00000593764 IGHV3-66A0A0C4DH42 116 aa13.72□□□□□ -0.21
SHKBP1-202ENST00000593764 PLA2G10O15496 165 aa13.72□□□□□ -0.21
SHKBP1-202ENST00000593764 HOXB5P09067 269 aa13.72□□□□□ -0.21
SHKBP1-202ENST00000593764 NPPCP23582 126 aa13.72□□□□□ -0.21
SHKBP1-202ENST00000593764 CRYBB3P26998 211 aa13.72□□□□□ -0.21
SHKBP1-202ENST00000593764 OR10J1P30954 320 aa13.72□□□□□ -0.21
SHKBP1-202ENST00000593764 GGNBP1Q5YKI7 109 aa13.72□□□□□ -0.21
SHKBP1-202ENST00000593764 ETFRF1Q6IPR1 90 aa13.72□□□□□ -0.21
SHKBP1-202ENST00000593764 TCF24Q7RTU0 167 aa13.72□□□□□ -0.21
SHKBP1-202ENST00000593764 OR1S2Q8NGQ3 325 aa13.72□□□□□ -0.21
SHKBP1-202ENST00000593764 C7orf50Q9BRJ6 194 aaKnown RBP13.72□□□□□ -0.21
SHKBP1-202ENST00000593764 GGTLC1Q9BX51 225 aa13.72□□□□□ -0.21
SHKBP1-202ENST00000593764 CSMD3Q7Z407 3707 aa13.71□□□□□ -0.21
SHKBP1-202ENST00000593764 IGKV3-7A0A075B6H7 116 aa13.71□□□□□ -0.21
SHKBP1-202ENST00000593764 FAM90A26D6RGX4 464 aa13.71□□□□□ -0.21
SHKBP1-202ENST00000593764 DFFBO76075 338 aa13.71□□□□□ -0.21
SHKBP1-202ENST00000593764 CD5P06127 495 aa13.71□□□□□ -0.21
SHKBP1-202ENST00000593764 TFPI2P48307 235 aa13.71□□□□□ -0.21
SHKBP1-202ENST00000593764 ATP5IP56385 69 aaPredicted RBP13.71□□□□□ -0.21
SHKBP1-202ENST00000593764 YPEL3P61236 119 aaPredicted RBP13.71□□□□□ -0.21
SHKBP1-202ENST00000593764 GBGT1Q8N5D6 347 aa13.71□□□□□ -0.21
SHKBP1-202ENST00000593764 CENPXA8MT69 81 aa13.7□□□□□ -0.22
SHKBP1-202ENST00000593764 SCGB2A1O75556 95 aa13.7□□□□□ -0.22
SHKBP1-202ENST00000593764 IFNA4P05014 189 aa13.7□□□□□ -0.22
SHKBP1-202ENST00000593764 OR4E1P0C645 316 aa13.7□□□□□ -0.22
SHKBP1-202ENST00000593764 IAPPP10997 89 aa13.7□□□□□ -0.22
SHKBP1-202ENST00000593764 ANXA7P20073 488 aaKnown RBP13.7□□□□□ -0.22
SHKBP1-202ENST00000593764 BMI1P35226 326 aa13.7□□□□□ -0.22
SHKBP1-202ENST00000593764 DHRS2Q13268 280 aa13.7□□□□□ -0.22
SHKBP1-202ENST00000593764 ACY3Q96HD9 319 aa13.7□□□□□ -0.22
SHKBP1-202ENST00000593764 METTL26Q96S19 204 aa13.7□□□□□ -0.22
SHKBP1-202ENST00000593764 U3KQE9 123 aa13.7□□□□□ -0.22
SHKBP1-202ENST00000593764 MPTX1A8MV57 137 aa13.69□□□□□ -0.22
SHKBP1-202ENST00000593764 ADAP1O75689 374 aa13.69□□□□□ -0.22
SHKBP1-202ENST00000593764 GPX4P36969 197 aaPredicted RBP13.69□□□□□ -0.22
SHKBP1-202ENST00000593764 CASC10Q5T4H9 136 aa13.69□□□□□ -0.22
SHKBP1-202ENST00000593764 LYG2Q86SG7 212 aa13.69□□□□□ -0.22
SHKBP1-202ENST00000593764 APRG1Q8IVJ8 170 aa13.69□□□□□ -0.22
SHKBP1-202ENST00000593764 Q8WTZ3 238 aa13.69□□□□□ -0.22
SHKBP1-202ENST00000593764 MAGT1Q9H0U3 335 aa13.69□□□□□ -0.22
SHKBP1-202ENST00000593764 MS4A6AQ9H2W1 248 aa13.69□□□□□ -0.22
SHKBP1-202ENST00000593764 GAMTQ14353 236 aa13.68□□□□□ -0.22
SHKBP1-202ENST00000593764 ZNF124Q15973 351 aa13.68□□□□□ -0.22
SHKBP1-202ENST00000593764 TMEM231Q9H6L2 316 aa13.68□□□□□ -0.22
SHKBP1-202ENST00000593764 A0A1W2PS18 150 aa13.67□□□□□ -0.22
SHKBP1-202ENST00000593764 SYNGR2O43760 224 aa13.67□□□□□ -0.22
SHKBP1-202ENST00000593764 MED6O75586 246 aa13.67□□□□□ -0.22
SHKBP1-202ENST00000593764 TOMM40O96008 361 aa13.67□□□□□ -0.22
SHKBP1-202ENST00000593764 PAFAH1B2P68402 229 aa13.67□□□□□ -0.22
SHKBP1-202ENST00000593764 ID3Q02535 119 aa13.67□□□□□ -0.22
SHKBP1-202ENST00000593764 USF2Q15853 346 aaPredicted RBP13.67□□□□□ -0.22
SHKBP1-202ENST00000593764 WFDC3Q8IUB2 231 aa13.67□□□□□ -0.22
SHKBP1-202ENST00000593764 OVOL2Q9BRP0 275 aa13.67□□□□□ -0.22
SHKBP1-202ENST00000593764 STARD9Q9P2P6 4700 aa13.66□□□□□ -0.22
SHKBP1-202ENST00000593764 IGKV1D-37A0A075B6S9 117 aa13.66□□□□□ -0.22
SHKBP1-202ENST00000593764 TRAV2A0A0B4J234 112 aa13.66□□□□□ -0.22
SHKBP1-202ENST00000593764 A6NHS1 94 aa13.66□□□□□ -0.22
SHKBP1-202ENST00000593764 WRBO00258 174 aa13.66□□□□□ -0.22
SHKBP1-202ENST00000593764 LYRM1O43325 122 aa13.66□□□□□ -0.22
SHKBP1-202ENST00000593764 RD3LP0DJH9 198 aa13.66□□□□□ -0.22
SHKBP1-202ENST00000593764 PSG1P11464 419 aa13.66□□□□□ -0.22
SHKBP1-202ENST00000593764 LYL1P12980 280 aa13.66□□□□□ -0.22
SHKBP1-202ENST00000593764 P2RY1P47900 373 aa13.66□□□□□ -0.22
SHKBP1-202ENST00000593764 CMC4P56277 68 aaPredicted RBP13.66□□□□□ -0.22
SHKBP1-202ENST00000593764 RPL11P62913 178 aaKnown RBP13.66□□□□□ -0.22
SHKBP1-202ENST00000593764 CNPY1Q3B7I2 92 aa13.66□□□□□ -0.22
SHKBP1-202ENST00000593764 C4orf46Q504U0 113 aa13.66□□□□□ -0.22
SHKBP1-202ENST00000593764 LINC00299Q6ZSB3 139 aa13.66□□□□□ -0.22
SHKBP1-202ENST00000593764 FAM24BQ8N5W8 94 aa13.66□□□□□ -0.22
SHKBP1-202ENST00000593764 COQ8AQ8NI60 647 aa13.66□□□□□ -0.22
SHKBP1-202ENST00000593764 CIB3Q96Q77 187 aaPredicted RBP13.66□□□□□ -0.22
SHKBP1-202ENST00000593764 MAP6D1Q9H9H5 199 aa13.66□□□□□ -0.22
SHKBP1-202ENST00000593764 KIR2DL5BA0A0G2JN68 375 aa13.65□□□□□ -0.22
SHKBP1-202ENST00000593764 KIR2DL5BA0A0G2JPC4 375 aa13.65□□□□□ -0.22
SHKBP1-202ENST00000593764 PRSS46E5RG02 174 aa13.65□□□□□ -0.22
SHKBP1-202ENST00000593764 DNASE2O00115 360 aaPredicted RBP13.65□□□□□ -0.22
SHKBP1-202ENST00000593764 IL4P05112 153 aa13.65□□□□□ -0.22
SHKBP1-202ENST00000593764 RAB11AP62491 216 aa13.65□□□□□ -0.22
SHKBP1-202ENST00000593764 KIR2DL5AQ8N109 375 aa13.65□□□□□ -0.22
SHKBP1-202ENST00000593764 KIR2DL5BQ8NHK3 375 aa13.65□□□□□ -0.22
SHKBP1-202ENST00000593764 CCDC32Q9BV29 185 aa13.65□□□□□ -0.22
SHKBP1-202ENST00000593764 HNRNPCP07910 306 aaKnown RBP eCLIP13.64□□□□□ -0.23
SHKBP1-202ENST00000593764 RPL35AP18077 110 aaKnown RBP13.64□□□□□ -0.23
SHKBP1-202ENST00000593764 APOC4P55056 127 aa13.64□□□□□ -0.23
SHKBP1-202ENST00000593764 ZNF90Q03938 601 aa13.64□□□□□ -0.23
SHKBP1-202ENST00000593764 C16orf54Q6UWD8 224 aa13.64□□□□□ -0.23
SHKBP1-202ENST00000593764 Q6ZWC4 215 aa13.64□□□□□ -0.23
SHKBP1-202ENST00000593764 OR4D5Q8NGN0 318 aa13.64□□□□□ -0.23
SHKBP1-202ENST00000593764 MITD1Q8WV92 249 aa13.64□□□□□ -0.23
SHKBP1-202ENST00000593764 GLMPQ8WWB7 406 aa13.64□□□□□ -0.23
SHKBP1-202ENST00000593764 C20orf85Q9H1P6 137 aa13.64□□□□□ -0.23
SHKBP1-202ENST00000593764 DYNC2H1Q8NCM8 4307 aaKnown RBP13.64□□□□□ -0.23
SHKBP1-202ENST00000593764 RYR3Q15413 4870 aa13.63□□□□□ -0.23
SHKBP1-202ENST00000593764 IGKV1OR2-108A0A075B7D4 117 aa13.63□□□□□ -0.23
SHKBP1-202ENST00000593764 K7EQG2 157 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms