RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 RPL11P62913 178 aaKnown RBP7.59□□□□□ -1.19
BRCA1-227ENST00000591849 PAFAH1B2P68402 229 aa7.59□□□□□ -1.19
BRCA1-227ENST00000591849 C11orf87Q6NUJ2 197 aa7.59□□□□□ -1.19
BRCA1-227ENST00000591849 OR1S2Q8NGQ3 325 aa7.59□□□□□ -1.19
BRCA1-227ENST00000591849 SLC35E1Q96K37 410 aa7.59□□□□□ -1.19
BRCA1-227ENST00000591849 METTL26Q96S19 204 aa7.59□□□□□ -1.19
BRCA1-227ENST00000591849 RHPN1-AS1Q9BWJ2 59 aa7.59□□□□□ -1.19
BRCA1-227ENST00000591849 TMEM231Q9H6L2 316 aa7.59□□□□□ -1.19
BRCA1-227ENST00000591849 GSKIPQ9P0R6 139 aa7.59□□□□□ -1.19
BRCA1-227ENST00000591849 U3KQK5 164 aa7.59□□□□□ -1.19
BRCA1-227ENST00000591849 IGKV3-7A0A075B6H7 116 aa7.58□□□□□ -1.2
BRCA1-227ENST00000591849 A0A1W2PS18 150 aa7.58□□□□□ -1.2
BRCA1-227ENST00000591849 OR4C46A6NHA9 309 aa7.58□□□□□ -1.2
BRCA1-227ENST00000591849 FAM25EA8MYX2 175 aa7.58□□□□□ -1.2
BRCA1-227ENST00000591849 DNASE2O00115 360 aaPredicted RBP7.58□□□□□ -1.2
BRCA1-227ENST00000591849 PITX3O75364 302 aa7.58□□□□□ -1.2
BRCA1-227ENST00000591849 SCGB1D2O95969 90 aa7.58□□□□□ -1.2
BRCA1-227ENST00000591849 NKX2-1P43699 371 aaPredicted RBP7.58□□□□□ -1.2
BRCA1-227ENST00000591849 TFPI2P48307 235 aa7.58□□□□□ -1.2
BRCA1-227ENST00000591849 IAH1Q2TAA2 248 aaPredicted RBP7.58□□□□□ -1.2
BRCA1-227ENST00000591849 SPANXN5Q5MJ07 72 aa7.58□□□□□ -1.2
BRCA1-227ENST00000591849 PRSS54Q6PEW0 395 aa7.58□□□□□ -1.2
BRCA1-227ENST00000591849 SBSPONQ8IVN8 264 aa7.58□□□□□ -1.2
BRCA1-227ENST00000591849 DEFB125Q8N687 156 aa7.58□□□□□ -1.2
BRCA1-227ENST00000591849 ENKURQ8TC29 256 aa7.58□□□□□ -1.2
BRCA1-227ENST00000591849 SPAG8Q99932 426 aaPredicted RBP7.58□□□□□ -1.2
BRCA1-227ENST00000591849 SRD5A3Q9H8P0 318 aa7.58□□□□□ -1.2
BRCA1-227ENST00000591849 NUDT15Q9NV35 164 aa7.58□□□□□ -1.2
BRCA1-227ENST00000591849 MRPL36Q9P0J6 103 aaKnown RBP7.58□□□□□ -1.2
BRCA1-227ENST00000591849 DNAH3Q8TD57 4116 aa7.58□□□□□ -1.2
BRCA1-227ENST00000591849 KMT2CQ8NEZ4 4911 aaKnown RBP7.58□□□□□ -1.2
BRCA1-227ENST00000591849 IGHV3-66A0A0C4DH42 116 aa7.57□□□□□ -1.2
BRCA1-227ENST00000591849 C5orf51A6NDU8 294 aa7.57□□□□□ -1.2
BRCA1-227ENST00000591849 ZFP92A6NM28 416 aa7.57□□□□□ -1.2
BRCA1-227ENST00000591849 CHEK1O14757 476 aa7.57□□□□□ -1.2
BRCA1-227ENST00000591849 TSPAN4O14817 238 aa7.57□□□□□ -1.2
BRCA1-227ENST00000591849 UPK1BO75841 260 aa7.57□□□□□ -1.2
BRCA1-227ENST00000591849 CD5P06127 495 aa7.57□□□□□ -1.2
BRCA1-227ENST00000591849 FABP1P07148 127 aa7.57□□□□□ -1.2
BRCA1-227ENST00000591849 RD3LP0DJH9 198 aa7.57□□□□□ -1.2
BRCA1-227ENST00000591849 GPX4P36969 197 aaPredicted RBP7.57□□□□□ -1.2
BRCA1-227ENST00000591849 CMC4P56277 68 aaPredicted RBP7.57□□□□□ -1.2
BRCA1-227ENST00000591849 WFDC3Q8IUB2 231 aa7.57□□□□□ -1.2
BRCA1-227ENST00000591849 ZNF431Q8TF32 576 aaPredicted RBP7.57□□□□□ -1.2
BRCA1-227ENST00000591849 GRAMD2BQ96HH9 432 aa7.57□□□□□ -1.2
BRCA1-227ENST00000591849 OR10C1Q96KK4 312 aa7.57□□□□□ -1.2
BRCA1-227ENST00000591849 RNF2Q99496 336 aa7.57□□□□□ -1.2
BRCA1-227ENST00000591849 C19orf73Q9NVV2 129 aa7.57□□□□□ -1.2
BRCA1-227ENST00000591849 PSENENQ9NZ42 101 aa7.57□□□□□ -1.2
BRCA1-227ENST00000591849 STRAPQ9Y3F4 350 aaKnown RBP7.57□□□□□ -1.2
BRCA1-227ENST00000591849 TENM3Q9P273 2699 aa7.57□□□□□ -1.2
BRCA1-227ENST00000591849 A8MZ25 164 aa7.56□□□□□ -1.2
BRCA1-227ENST00000591849 IGKV1-17P01599 117 aa7.56□□□□□ -1.2
BRCA1-227ENST00000591849 IGLC1P0CG04 106 aa7.56□□□□□ -1.2
BRCA1-227ENST00000591849 EIF2B2P49770 351 aaKnown RBP7.56□□□□□ -1.2
BRCA1-227ENST00000591849 DEFA1P59665 94 aa7.56□□□□□ -1.2
BRCA1-227ENST00000591849 DEFA3P59666 94 aa7.56□□□□□ -1.2
BRCA1-227ENST00000591849 YPEL3P61236 119 aaPredicted RBP7.56□□□□□ -1.2
BRCA1-227ENST00000591849 POLR2GP62487 172 aaKnown RBP eCLIP7.56□□□□□ -1.2
BRCA1-227ENST00000591849 ASAH1Q13510 395 aa7.56□□□□□ -1.2
BRCA1-227ENST00000591849 TCF24Q7RTU0 167 aa7.56□□□□□ -1.2
BRCA1-227ENST00000591849 GBGT1Q8N5D6 347 aa7.56□□□□□ -1.2
BRCA1-227ENST00000591849 C12orf45Q8N5I9 185 aaPredicted RBP7.56□□□□□ -1.2
BRCA1-227ENST00000591849 MITD1Q8WV92 249 aa7.56□□□□□ -1.2
BRCA1-227ENST00000591849 TMEM170AQ8WVE7 144 aa7.56□□□□□ -1.2
BRCA1-227ENST00000591849 ST8SIA2Q92186 375 aa7.56□□□□□ -1.2
BRCA1-227ENST00000591849 SEC22CQ9BRL7 303 aa7.56□□□□□ -1.2
BRCA1-227ENST00000591849 GPN1Q9HCN4 374 aaPredicted RBP7.56□□□□□ -1.2
BRCA1-227ENST00000591849 UBQLN2Q9UHD9 624 aa7.56□□□□□ -1.2
BRCA1-227ENST00000591849 PFDN2Q9UHV9 154 aa7.56□□□□□ -1.2
BRCA1-227ENST00000591849 SMCO3A2RU48 225 aa7.55□□□□□ -1.2
BRCA1-227ENST00000591849 MPTX1A8MV57 137 aa7.55□□□□□ -1.2
BRCA1-227ENST00000591849 H3BP45 60 aa7.55□□□□□ -1.2
BRCA1-227ENST00000591849 L7N2F9 121 aa7.55□□□□□ -1.2
BRCA1-227ENST00000591849 SSSCA1O60232 199 aa7.55□□□□□ -1.2
BRCA1-227ENST00000591849 HNRNPCP07910 306 aaKnown RBP eCLIP7.55□□□□□ -1.2
BRCA1-227ENST00000591849 VAMP2P63027 116 aa7.55□□□□□ -1.2
BRCA1-227ENST00000591849 ID3Q02535 119 aa7.55□□□□□ -1.2
BRCA1-227ENST00000591849 GAMTQ14353 236 aa7.55□□□□□ -1.2
BRCA1-227ENST00000591849 HAGHQ16775 308 aa7.55□□□□□ -1.2
BRCA1-227ENST00000591849 ZBTB8BQ8NAP8 495 aaPredicted RBP7.55□□□□□ -1.2
BRCA1-227ENST00000591849 PPP1R14BQ96C90 147 aa7.55□□□□□ -1.2
BRCA1-227ENST00000591849 RCHY1Q96PM5 261 aa7.55□□□□□ -1.2
BRCA1-227ENST00000591849 SPATA25Q9BR10 227 aa7.55□□□□□ -1.2
BRCA1-227ENST00000591849 PBDC1Q9BVG4 233 aa7.55□□□□□ -1.2
BRCA1-227ENST00000591849 WFDC10AQ9H1F0 79 aa7.55□□□□□ -1.2
BRCA1-227ENST00000591849 ZFAND3Q9H8U3 227 aa7.55□□□□□ -1.2
BRCA1-227ENST00000591849 RABAC1Q9UI14 185 aa7.55□□□□□ -1.2
BRCA1-227ENST00000591849 CCSO14618 274 aa7.54□□□□□ -1.2
BRCA1-227ENST00000591849 DFFBO76075 338 aa7.54□□□□□ -1.2
BRCA1-227ENST00000591849 TOMM40O96008 361 aa7.54□□□□□ -1.2
BRCA1-227ENST00000591849 APOHP02749 345 aaPredicted RBP7.54□□□□□ -1.2
BRCA1-227ENST00000591849 IL4P05112 153 aa7.54□□□□□ -1.2
BRCA1-227ENST00000591849 AKR1C1Q04828 323 aa7.54□□□□□ -1.2
BRCA1-227ENST00000591849 OR2F1Q13607 317 aa7.54□□□□□ -1.2
BRCA1-227ENST00000591849 OR8G2PQ6IF36 304 aa7.54□□□□□ -1.2
BRCA1-227ENST00000591849 GSG1LQ6UXU4 331 aa7.54□□□□□ -1.2
BRCA1-227ENST00000591849 OR51G1Q8NGK1 321 aa7.54□□□□□ -1.2
BRCA1-227ENST00000591849 OR4D5Q8NGN0 318 aa7.54□□□□□ -1.2
BRCA1-227ENST00000591849 SMIM8Q96KF7 97 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms