RNA–Protein interactions for RNA: ENST00000589146.5

CAPNS1-207, Transcript of calpain small subunit 1, humanhuman

TSL 3 BASIC

Gene CAPNS1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-207ENST00000589146 ABCA1O95477 2261 aa17.86■□□□□ 0.45
CAPNS1-207ENST00000589146 TRBV9A0A0B4J1U6 114 aa17.86■□□□□ 0.45
CAPNS1-207ENST00000589146 IGHV3-21A0A0B4J1V1 117 aa17.86■□□□□ 0.45
CAPNS1-207ENST00000589146 NDUFS6O75380 124 aaKnown RBP17.86■□□□□ 0.45
CAPNS1-207ENST00000589146 BRI3O95415 125 aa17.86■□□□□ 0.45
CAPNS1-207ENST00000589146 IFNA1P01562 189 aa17.86■□□□□ 0.45
CAPNS1-207ENST00000589146 IGHV4-59P01825 116 aa17.86■□□□□ 0.45
CAPNS1-207ENST00000589146 FCGR2BP31994 310 aaPredicted RBP17.86■□□□□ 0.45
CAPNS1-207ENST00000589146 TAGLN2P37802 199 aaKnown RBP17.86■□□□□ 0.45
CAPNS1-207ENST00000589146 PLP1P60201 277 aa17.86■□□□□ 0.45
CAPNS1-207ENST00000589146 KRTAP1-1Q07627 177 aa17.86■□□□□ 0.45
CAPNS1-207ENST00000589146 ICAM4Q14773 271 aa17.86■□□□□ 0.45
CAPNS1-207ENST00000589146 OR1L4Q8NGR5 311 aa17.86■□□□□ 0.45
CAPNS1-207ENST00000589146 VN1R17PQ8TDU5 208 aa17.86■□□□□ 0.45
CAPNS1-207ENST00000589146 NARS2Q96I59 477 aaKnown RBP17.86■□□□□ 0.45
CAPNS1-207ENST00000589146 RARRES2Q99969 163 aa17.86■□□□□ 0.45
CAPNS1-207ENST00000589146 TMUB1Q9BVT8 246 aa17.86■□□□□ 0.45
CAPNS1-207ENST00000589146 FUT9Q9Y231 359 aa17.86■□□□□ 0.45
CAPNS1-207ENST00000589146 TRAV30A0A087WSZ9 112 aa17.85■□□□□ 0.45
CAPNS1-207ENST00000589146 SMAD7O15105 426 aaKnown RBP17.85■□□□□ 0.45
CAPNS1-207ENST00000589146 CD5LO43866 347 aa17.85■□□□□ 0.45
CAPNS1-207ENST00000589146 NDUFB8O95169 186 aa17.85■□□□□ 0.45
CAPNS1-207ENST00000589146 BCL2P10415 239 aa17.85■□□□□ 0.45
CAPNS1-207ENST00000589146 PSMB3P49720 205 aa17.85■□□□□ 0.45
CAPNS1-207ENST00000589146 PPT1P50897 306 aa17.85■□□□□ 0.45
CAPNS1-207ENST00000589146 MFAP4P55083 255 aa17.85■□□□□ 0.45
CAPNS1-207ENST00000589146 ECSCRQ19T08 205 aa17.85■□□□□ 0.45
CAPNS1-207ENST00000589146 RBMS3Q6XE24 437 aaKnown RBP17.85■□□□□ 0.45
CAPNS1-207ENST00000589146 SLC35E3Q7Z769 313 aa17.85■□□□□ 0.45
CAPNS1-207ENST00000589146 PFDN5Q99471 154 aa17.85■□□□□ 0.45
CAPNS1-207ENST00000589146 TXN2Q99757 166 aa17.85■□□□□ 0.45
CAPNS1-207ENST00000589146 SEC11CQ9BY50 192 aa17.85■□□□□ 0.45
CAPNS1-207ENST00000589146 MRPL32Q9BYC8 188 aaKnown RBP17.85■□□□□ 0.45
CAPNS1-207ENST00000589146 SEPSECSQ9HD40 501 aaKnown RBP17.85■□□□□ 0.45
CAPNS1-207ENST00000589146 DNAJC4Q9NNZ3 241 aa17.85■□□□□ 0.45
CAPNS1-207ENST00000589146 GNG13Q9P2W3 67 aa17.85■□□□□ 0.45
CAPNS1-207ENST00000589146 CARHSP1Q9Y2V2 147 aaKnown RBP17.85■□□□□ 0.45
CAPNS1-207ENST00000589146 TRAV41A0A0B4J266 112 aa17.84■□□□□ 0.45
CAPNS1-207ENST00000589146 EIF3GO75821 320 aaKnown RBP eCLIP17.84■□□□□ 0.45
CAPNS1-207ENST00000589146 CXorf1O96002 111 aa17.84■□□□□ 0.45
CAPNS1-207ENST00000589146 HSPB1P04792 205 aaKnown RBP17.84■□□□□ 0.45
CAPNS1-207ENST00000589146 ADCYAP1P18509 176 aa17.84■□□□□ 0.45
CAPNS1-207ENST00000589146 NPBWR1P48145 328 aa17.84■□□□□ 0.45
CAPNS1-207ENST00000589146 HAGHQ16775 308 aa17.84■□□□□ 0.45
CAPNS1-207ENST00000589146 TMEM37Q8WXS4 190 aa17.84■□□□□ 0.45
CAPNS1-207ENST00000589146 SLC35B3Q9H1N7 401 aa17.84■□□□□ 0.45
CAPNS1-207ENST00000589146 MANBALQ9NQG1 85 aa17.84■□□□□ 0.45
CAPNS1-207ENST00000589146 CSPG4Q6UVK1 2322 aa17.83■□□□□ 0.45
CAPNS1-207ENST00000589146 G3V318 75 aa17.83■□□□□ 0.44
CAPNS1-207ENST00000589146 HMGB3O15347 200 aaKnown RBP17.83■□□□□ 0.44
CAPNS1-207ENST00000589146 IGKV1-17P01599 117 aa17.83■□□□□ 0.44
CAPNS1-207ENST00000589146 FABP1P07148 127 aa17.83■□□□□ 0.44
CAPNS1-207ENST00000589146 SFTA3P0C7M3 94 aa17.83■□□□□ 0.44
CAPNS1-207ENST00000589146 FAM78BQ5VT40 261 aa17.83■□□□□ 0.44
CAPNS1-207ENST00000589146 SPATA31B1PQ5VZV4 182 aa17.83■□□□□ 0.44
CAPNS1-207ENST00000589146 VAX2Q9UIW0 290 aa17.83■□□□□ 0.44
CAPNS1-207ENST00000589146 FBXL7Q9UJT9 491 aa17.83■□□□□ 0.44
CAPNS1-207ENST00000589146 ELOA3CA0A087WX78 387 aaPredicted RBP17.82■□□□□ 0.44
CAPNS1-207ENST00000589146 F8W735 103 aaPredicted RBP17.82■□□□□ 0.44
CAPNS1-207ENST00000589146 OR2J3O76001 311 aa17.82■□□□□ 0.44
CAPNS1-207ENST00000589146 SRP19P09132 144 aaKnown RBP17.82■□□□□ 0.44
CAPNS1-207ENST00000589146 PATE2Q6UY27 113 aa17.82■□□□□ 0.44
CAPNS1-207ENST00000589146 TMPRSS5Q9H3S3 457 aa17.82■□□□□ 0.44
CAPNS1-207ENST00000589146 C21orf62Q9NYP8 219 aa17.82■□□□□ 0.44
CAPNS1-207ENST00000589146 TECRQ9NZ01 308 aaKnown RBP17.82■□□□□ 0.44
CAPNS1-207ENST00000589146 VPREB3Q9UKI3 123 aa17.82■□□□□ 0.44
CAPNS1-207ENST00000589146 MAP1AP78559 2803 aaPredicted RBP17.82■□□□□ 0.44
CAPNS1-207ENST00000589146 F8W036 122 aa17.81■□□□□ 0.44
CAPNS1-207ENST00000589146 COX7A2P2O60397 106 aa17.81■□□□□ 0.44
CAPNS1-207ENST00000589146 YPEL3P61236 119 aaPredicted RBP17.81■□□□□ 0.44
CAPNS1-207ENST00000589146 BLCAPP62952 87 aa17.81■□□□□ 0.44
CAPNS1-207ENST00000589146 TIGITQ495A1 244 aa17.81■□□□□ 0.44
CAPNS1-207ENST00000589146 MIR17HGQ75NE6 70 aa17.81■□□□□ 0.44
CAPNS1-207ENST00000589146 NECAP1Q8NC96 275 aa17.81■□□□□ 0.44
CAPNS1-207ENST00000589146 GSX1Q9H4S2 264 aaPredicted RBP17.81■□□□□ 0.44
CAPNS1-207ENST00000589146 ITPR3Q14573 2671 aa17.81■□□□□ 0.44
CAPNS1-207ENST00000589146 H3BUA1 57 aa17.8■□□□□ 0.44
CAPNS1-207ENST00000589146 ARL14EPLP0DKL9 152 aa17.8■□□□□ 0.44
CAPNS1-207ENST00000589146 TAS2R45P59539 299 aa17.8■□□□□ 0.44
CAPNS1-207ENST00000589146 C9orf152Q5JTZ5 239 aa17.8■□□□□ 0.44
CAPNS1-207ENST00000589146 SPNS3Q6ZMD2 512 aa17.8■□□□□ 0.44
CAPNS1-207ENST00000589146 RXFP4Q8TDU9 374 aa17.8■□□□□ 0.44
CAPNS1-207ENST00000589146 ATP6V0BQ99437 205 aa17.8■□□□□ 0.44
CAPNS1-207ENST00000589146 AP4M1O00189 453 aa17.79■□□□□ 0.44
CAPNS1-207ENST00000589146 TOMM40O96008 361 aa17.79■□□□□ 0.44
CAPNS1-207ENST00000589146 C8orf88P0DMB2 117 aa17.79■□□□□ 0.44
CAPNS1-207ENST00000589146 GCHFRP30047 84 aa17.79■□□□□ 0.44
CAPNS1-207ENST00000589146 RHOGP84095 191 aa17.79■□□□□ 0.44
CAPNS1-207ENST00000589146 C10orf113Q5VZT2 155 aa17.79■□□□□ 0.44
CAPNS1-207ENST00000589146 SUN5Q8TC36 379 aa17.79■□□□□ 0.44
CAPNS1-207ENST00000589146 HYPMO75409 117 aa17.78■□□□□ 0.44
CAPNS1-207ENST00000589146 RD3LP0DJH9 198 aa17.78■□□□□ 0.44
CAPNS1-207ENST00000589146 PSG1P11464 419 aa17.78■□□□□ 0.44
CAPNS1-207ENST00000589146 PPIFP30405 207 aaKnown RBP17.78■□□□□ 0.44
CAPNS1-207ENST00000589146 PQLC2Q6ZP29 291 aa17.78■□□□□ 0.44
CAPNS1-207ENST00000589146 CCDC28AQ8IWP9 274 aa17.78■□□□□ 0.44
CAPNS1-207ENST00000589146 ZNF502Q8TBZ5 544 aa17.78■□□□□ 0.44
CAPNS1-207ENST00000589146 FAM167A-AS1Q96KT0 104 aa17.78■□□□□ 0.44
CAPNS1-207ENST00000589146 FAM223BA6NKX1 122 aa17.77■□□□□ 0.44
CAPNS1-207ENST00000589146 GNG7O60262 68 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms