RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 WWC2-AS2Q96NR7 200 aa11.11□□□□□ -0.63
ATG4D-207ENST00000587256 RNF2Q99496 336 aa11.11□□□□□ -0.63
ATG4D-207ENST00000587256 MAGT1Q9H0U3 335 aa11.11□□□□□ -0.63
ATG4D-207ENST00000587256 PTTG2Q9NZH5 202 aa11.11□□□□□ -0.63
ATG4D-207ENST00000587256 PAIP2BQ9ULR5 123 aaKnown RBP11.11□□□□□ -0.63
ATG4D-207ENST00000587256 OR4C46A6NHA9 309 aa11.1□□□□□ -0.63
ATG4D-207ENST00000587256 CHEK1O14757 476 aa11.1□□□□□ -0.63
ATG4D-207ENST00000587256 IFNA21P01568 189 aa11.1□□□□□ -0.63
ATG4D-207ENST00000587256 OR10J1P30954 320 aa11.1□□□□□ -0.63
ATG4D-207ENST00000587256 ATP5IP56385 69 aaPredicted RBP11.1□□□□□ -0.63
ATG4D-207ENST00000587256 CIB3Q96Q77 187 aaPredicted RBP11.1□□□□□ -0.63
ATG4D-207ENST00000587256 HUWE1Q7Z6Z7 4374 aaKnown RBP11.1□□□□□ -0.63
ATG4D-207ENST00000587256 SYNGR2O43760 224 aa11.09□□□□□ -0.63
ATG4D-207ENST00000587256 IGKV1-17P01599 117 aa11.09□□□□□ -0.63
ATG4D-207ENST00000587256 IGLC1P0CG04 106 aa11.09□□□□□ -0.63
ATG4D-207ENST00000587256 RAB11AP62491 216 aa11.09□□□□□ -0.63
ATG4D-207ENST00000587256 HAGHQ16775 308 aa11.09□□□□□ -0.63
ATG4D-207ENST00000587256 ST8SIA2Q92186 375 aa11.09□□□□□ -0.63
ATG4D-207ENST00000587256 NPIPB3Q92617 1050 aa11.09□□□□□ -0.63
ATG4D-207ENST00000587256 NARS2Q96I59 477 aaKnown RBP11.09□□□□□ -0.63
ATG4D-207ENST00000587256 SLC35E1Q96K37 410 aa11.09□□□□□ -0.63
ATG4D-207ENST00000587256 METTL26Q96S19 204 aa11.09□□□□□ -0.63
ATG4D-207ENST00000587256 SPATA25Q9BR10 227 aa11.09□□□□□ -0.63
ATG4D-207ENST00000587256 TM2D3Q9BRN9 247 aa11.09□□□□□ -0.63
ATG4D-207ENST00000587256 WDR12Q9GZL7 423 aaKnown RBP11.09□□□□□ -0.63
ATG4D-207ENST00000587256 TMEM231Q9H6L2 316 aa11.09□□□□□ -0.63
ATG4D-207ENST00000587256 NUDT15Q9NV35 164 aa11.09□□□□□ -0.63
ATG4D-207ENST00000587256 IGKV3-7A0A075B6H7 116 aa11.08□□□□□ -0.64
ATG4D-207ENST00000587256 TRAV6A0A075B6T7 132 aa11.08□□□□□ -0.64
ATG4D-207ENST00000587256 IGHV3-66A0A0C4DH42 116 aa11.08□□□□□ -0.64
ATG4D-207ENST00000587256 WRBO00258 174 aa11.08□□□□□ -0.64
ATG4D-207ENST00000587256 TCRBP04435 133 aa11.08□□□□□ -0.64
ATG4D-207ENST00000587256 NPPCP23582 126 aa11.08□□□□□ -0.64
ATG4D-207ENST00000587256 TFPI2P48307 235 aa11.08□□□□□ -0.64
ATG4D-207ENST00000587256 RPP30P78346 268 aaKnown RBP11.08□□□□□ -0.64
ATG4D-207ENST00000587256 UBQLN2Q9UHD9 624 aa11.08□□□□□ -0.64
ATG4D-207ENST00000587256 MPTX1A8MV57 137 aa11.07□□□□□ -0.64
ATG4D-207ENST00000587256 APOHP02749 345 aaPredicted RBP11.07□□□□□ -0.64
ATG4D-207ENST00000587256 CD5P06127 495 aa11.07□□□□□ -0.64
ATG4D-207ENST00000587256 YPEL3P61236 119 aaPredicted RBP11.07□□□□□ -0.64
ATG4D-207ENST00000587256 ZNF846Q147U1 533 aa11.07□□□□□ -0.64
ATG4D-207ENST00000587256 MZT2BQ6NZ67 158 aa11.07□□□□□ -0.64
ATG4D-207ENST00000587256 TCF24Q7RTU0 167 aa11.07□□□□□ -0.64
ATG4D-207ENST00000587256 Q8WTZ3 238 aa11.07□□□□□ -0.64
ATG4D-207ENST00000587256 VSIRQ9H7M9 311 aa11.07□□□□□ -0.64
ATG4D-207ENST00000587256 FAM240BA0A1B0GVZ2 78 aa11.06□□□□□ -0.64
ATG4D-207ENST00000587256 A0A1W2PS18 150 aa11.06□□□□□ -0.64
ATG4D-207ENST00000587256 RBMY1BA6NDE4 496 aaKnown RBP11.06□□□□□ -0.64
ATG4D-207ENST00000587256 RBMY1EA6NEQ0 496 aaKnown RBP11.06□□□□□ -0.64
ATG4D-207ENST00000587256 H3BP45 60 aa11.06□□□□□ -0.64
ATG4D-207ENST00000587256 SCGB1D2O95969 90 aa11.06□□□□□ -0.64
ATG4D-207ENST00000587256 IL4P05112 153 aa11.06□□□□□ -0.64
ATG4D-207ENST00000587256 RBMY1DP0C7P1 496 aaKnown RBP11.06□□□□□ -0.64
ATG4D-207ENST00000587256 NKX2-1P43699 371 aaPredicted RBP11.06□□□□□ -0.64
ATG4D-207ENST00000587256 RPL11P62913 178 aaKnown RBP11.06□□□□□ -0.64
ATG4D-207ENST00000587256 PAFAH1B2P68402 229 aa11.06□□□□□ -0.64
ATG4D-207ENST00000587256 ODF3L2Q3SX64 289 aa11.06□□□□□ -0.64
ATG4D-207ENST00000587256 GBGT1Q8N5D6 347 aa11.06□□□□□ -0.64
ATG4D-207ENST00000587256 MITD1Q8WV92 249 aa11.06□□□□□ -0.64
ATG4D-207ENST00000587256 GRAMD2BQ96HH9 432 aa11.06□□□□□ -0.64
ATG4D-207ENST00000587256 BATF3Q9NR55 127 aa11.06□□□□□ -0.64
ATG4D-207ENST00000587256 ZFP92A6NM28 416 aa11.05□□□□□ -0.64
ATG4D-207ENST00000587256 SSSCA1O60232 199 aa11.05□□□□□ -0.64
ATG4D-207ENST00000587256 DFFBO76075 338 aa11.05□□□□□ -0.64
ATG4D-207ENST00000587256 TOMM40O96008 361 aa11.05□□□□□ -0.64
ATG4D-207ENST00000587256 RD3LP0DJH9 198 aa11.05□□□□□ -0.64
ATG4D-207ENST00000587256 GPX4P36969 197 aaPredicted RBP11.05□□□□□ -0.64
ATG4D-207ENST00000587256 POLR2GP62487 172 aaKnown RBP eCLIP11.05□□□□□ -0.64
ATG4D-207ENST00000587256 ASAH1Q13510 395 aa11.05□□□□□ -0.64
ATG4D-207ENST00000587256 IAH1Q2TAA2 248 aaPredicted RBP11.05□□□□□ -0.64
ATG4D-207ENST00000587256 SPANXN5Q5MJ07 72 aa11.05□□□□□ -0.64
ATG4D-207ENST00000587256 LINC00322Q6ZN03 302 aaPredicted RBP11.05□□□□□ -0.64
ATG4D-207ENST00000587256 GGTLC1Q9BX51 225 aa11.05□□□□□ -0.64
ATG4D-207ENST00000587256 RETNQ9HD89 108 aa11.05□□□□□ -0.64
ATG4D-207ENST00000587256 TBC1D24Q9ULP9 559 aa11.05□□□□□ -0.64
ATG4D-207ENST00000587256 TENM3Q9P273 2699 aa11.05□□□□□ -0.64
ATG4D-207ENST00000587256 LOC102724200A0A096LPH7 203 aaPredicted RBP11.04□□□□□ -0.64
ATG4D-207ENST00000587256 DNASE2O00115 360 aaPredicted RBP11.04□□□□□ -0.64
ATG4D-207ENST00000587256 FABP1P07148 127 aa11.04□□□□□ -0.64
ATG4D-207ENST00000587256 HNRNPCP07910 306 aaKnown RBP eCLIP11.04□□□□□ -0.64
ATG4D-207ENST00000587256 H2AFB2P0C5Z0 115 aa11.04□□□□□ -0.64
ATG4D-207ENST00000587256 CRYBB3P26998 211 aa11.04□□□□□ -0.64
ATG4D-207ENST00000587256 P2RY1P47900 373 aa11.04□□□□□ -0.64
ATG4D-207ENST00000587256 GAMTQ14353 236 aa11.04□□□□□ -0.64
ATG4D-207ENST00000587256 OR4D5Q8NGN0 318 aa11.04□□□□□ -0.64
ATG4D-207ENST00000587256 ENKURQ8TC29 256 aa11.04□□□□□ -0.64
ATG4D-207ENST00000587256 SEC22CQ9BRL7 303 aa11.04□□□□□ -0.64
ATG4D-207ENST00000587256 STRAPQ9Y3F4 350 aaKnown RBP11.04□□□□□ -0.64
ATG4D-207ENST00000587256 FAM25EA8MYX2 175 aa11.03□□□□□ -0.64
ATG4D-207ENST00000587256 CCSO14618 274 aa11.03□□□□□ -0.64
ATG4D-207ENST00000587256 UPK1BO75841 260 aa11.03□□□□□ -0.64
ATG4D-207ENST00000587256 PSG1P11464 419 aa11.03□□□□□ -0.64
ATG4D-207ENST00000587256 ID3Q02535 119 aa11.03□□□□□ -0.64
ATG4D-207ENST00000587256 USF2Q15853 346 aaPredicted RBP11.03□□□□□ -0.64
ATG4D-207ENST00000587256 FAM90A2PQ658T7 463 aa11.03□□□□□ -0.64
ATG4D-207ENST00000587256 WFDC3Q8IUB2 231 aa11.03□□□□□ -0.64
ATG4D-207ENST00000587256 LILRB2Q8N423 598 aa11.03□□□□□ -0.64
ATG4D-207ENST00000587256 ZBTB8BQ8NAP8 495 aaPredicted RBP11.03□□□□□ -0.64
ATG4D-207ENST00000587256 STXBP6Q8NFX7 210 aa11.03□□□□□ -0.64
ATG4D-207ENST00000587256 ZNF431Q8TF32 576 aaPredicted RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 159.1 ms