RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 RPL15P61313 204 aaKnown RBP4.88□□□□□ -1.63
LIG3-206ENST00000586058 SSBP2P81877 361 aaPredicted RBP4.88□□□□□ -1.63
LIG3-206ENST00000586058 RHOGP84095 191 aa4.88□□□□□ -1.63
LIG3-206ENST00000586058 NDPQ00604 133 aa4.88□□□□□ -1.63
LIG3-206ENST00000586058 RELQ04864 619 aaPredicted RBP4.88□□□□□ -1.63
LIG3-206ENST00000586058 ATP5G2Q06055 141 aa4.88□□□□□ -1.63
LIG3-206ENST00000586058 C15orf32Q32M92 178 aa4.88□□□□□ -1.63
LIG3-206ENST00000586058 TOR2AQ5JU69 321 aa4.88□□□□□ -1.63
LIG3-206ENST00000586058 FAM78BQ5VT40 261 aa4.88□□□□□ -1.63
LIG3-206ENST00000586058 LCN15Q6UWW0 184 aa4.88□□□□□ -1.63
LIG3-206ENST00000586058 IL17RELQ6ZVW7 336 aa4.88□□□□□ -1.63
LIG3-206ENST00000586058 SLC7A5P1Q8MH63 180 aa4.88□□□□□ -1.63
LIG3-206ENST00000586058 BCL6BQ8N143 479 aaPredicted RBP4.88□□□□□ -1.63
LIG3-206ENST00000586058 CIARTQ8N365 385 aaPredicted RBP4.88□□□□□ -1.63
LIG3-206ENST00000586058 SIGLECL1Q8N7X8 197 aa4.88□□□□□ -1.63
LIG3-206ENST00000586058 THAP8Q8NA92 274 aa4.88□□□□□ -1.63
LIG3-206ENST00000586058 STXBP6Q8NFX7 210 aa4.88□□□□□ -1.63
LIG3-206ENST00000586058 OR1B1Q8NGR6 318 aa4.88□□□□□ -1.63
LIG3-206ENST00000586058 OR2T6Q8NHC8 308 aa4.88□□□□□ -1.63
LIG3-206ENST00000586058 Q8WTZ3 238 aa4.88□□□□□ -1.63
LIG3-206ENST00000586058 RCC1LQ96I51 464 aaKnown RBP4.88□□□□□ -1.63
LIG3-206ENST00000586058 ATP6V0BQ99437 205 aa4.88□□□□□ -1.63
LIG3-206ENST00000586058 SMDT1Q9H4I9 107 aa4.88□□□□□ -1.63
LIG3-206ENST00000586058 GNB4Q9HAV0 340 aa4.88□□□□□ -1.63
LIG3-206ENST00000586058 RPRMQ9NS64 109 aa4.88□□□□□ -1.63
LIG3-206ENST00000586058 TECRQ9NZ01 308 aaKnown RBP4.88□□□□□ -1.63
LIG3-206ENST00000586058 ZNF580Q9UK33 172 aa4.88□□□□□ -1.63
LIG3-206ENST00000586058 SLC45A2Q9UMX9 530 aa4.88□□□□□ -1.63
LIG3-206ENST00000586058 LSM4Q9Y4Z0 139 aaKnown RBP4.88□□□□□ -1.63
LIG3-206ENST00000586058 USP9YO00507 2555 aaPredicted RBP4.87□□□□□ -1.63
LIG3-206ENST00000586058 IGHV3-21A0A0B4J1V1 117 aa4.87□□□□□ -1.63
LIG3-206ENST00000586058 TRAV1-1A0A0B4J248 108 aa4.87□□□□□ -1.63
LIG3-206ENST00000586058 ANKRD34BA5PLL1 514 aa4.87□□□□□ -1.63
LIG3-206ENST00000586058 SH2D7A6NKC9 451 aaPredicted RBP4.87□□□□□ -1.63
LIG3-206ENST00000586058 I3L2K1 104 aa4.87□□□□□ -1.63
LIG3-206ENST00000586058 BMPR1BO00238 502 aa4.87□□□□□ -1.63
LIG3-206ENST00000586058 HYPMO75409 117 aa4.87□□□□□ -1.63
LIG3-206ENST00000586058 TOMM40O96008 361 aa4.87□□□□□ -1.63
LIG3-206ENST00000586058 RD3LP0DJH9 198 aa4.87□□□□□ -1.63
LIG3-206ENST00000586058 PF4V1P10720 104 aa4.87□□□□□ -1.63
LIG3-206ENST00000586058 CD99P14209 185 aa4.87□□□□□ -1.63
LIG3-206ENST00000586058 MDKP21741 143 aaPredicted RBP4.87□□□□□ -1.63
LIG3-206ENST00000586058 FHITP49789 147 aa4.87□□□□□ -1.63
LIG3-206ENST00000586058 RAB9AP51151 201 aa4.87□□□□□ -1.63
LIG3-206ENST00000586058 LYZP61626 148 aa4.87□□□□□ -1.63
LIG3-206ENST00000586058 GUK1Q16774 197 aa4.87□□□□□ -1.63
LIG3-206ENST00000586058 SPSB3Q6PJ21 355 aa4.87□□□□□ -1.63
LIG3-206ENST00000586058 PQLC2Q6ZP29 291 aa4.87□□□□□ -1.63
LIG3-206ENST00000586058 EIF4E3Q8N5X7 224 aaKnown RBP4.87□□□□□ -1.63
LIG3-206ENST00000586058 OR51G1Q8NGK1 321 aa4.87□□□□□ -1.63
LIG3-206ENST00000586058 PIFOQ8TCI5 191 aa4.87□□□□□ -1.63
LIG3-206ENST00000586058 RAB24Q969Q5 203 aa4.87□□□□□ -1.63
LIG3-206ENST00000586058 USMG5Q96IX5 58 aa4.87□□□□□ -1.63
LIG3-206ENST00000586058 TXNDC17Q9BRA2 123 aa4.87□□□□□ -1.63
LIG3-206ENST00000586058 PRDM13Q9H4Q3 707 aa4.87□□□□□ -1.63
LIG3-206ENST00000586058 FNDC4Q9H6D8 234 aaPredicted RBP4.87□□□□□ -1.63
LIG3-206ENST00000586058 TMEM167BQ9NRX6 74 aa4.87□□□□□ -1.63
LIG3-206ENST00000586058 DOK5Q9P104 306 aa4.87□□□□□ -1.63
LIG3-206ENST00000586058 GNG13Q9P2W3 67 aa4.87□□□□□ -1.63
LIG3-206ENST00000586058 FUT9Q9Y231 359 aa4.87□□□□□ -1.63
LIG3-206ENST00000586058 HIGD1AQ9Y241 93 aa4.87□□□□□ -1.63
LIG3-206ENST00000586058 CHD6Q8TD26 2715 aa4.87□□□□□ -1.63
LIG3-206ENST00000586058 TENM4Q6N022 2769 aa4.87□□□□□ -1.63
LIG3-206ENST00000586058 COL12A1Q99715 3063 aa4.86□□□□□ -1.63
LIG3-206ENST00000586058 UTP20O75691 2785 aaKnown RBP4.86□□□□□ -1.63
LIG3-206ENST00000586058 TMEM89A2RUT3 159 aa4.86□□□□□ -1.63
LIG3-206ENST00000586058 PSMB11A5LHX3 300 aa4.86□□□□□ -1.63
LIG3-206ENST00000586058 RBFOX3A6NFN3 312 aa4.86□□□□□ -1.63
LIG3-206ENST00000586058 MFSD2BA6NFX1 497 aa4.86□□□□□ -1.63
LIG3-206ENST00000586058 OR2T8A6NH00 312 aa4.86□□□□□ -1.63
LIG3-206ENST00000586058 DNAJC9-AS1A6NH13 148 aa4.86□□□□□ -1.63
LIG3-206ENST00000586058 SEC14L6B5MCN3 397 aa4.86□□□□□ -1.63
LIG3-206ENST00000586058 G3V318 75 aa4.86□□□□□ -1.63
LIG3-206ENST00000586058 K7EIM0 57 aa4.86□□□□□ -1.63
LIG3-206ENST00000586058 IGHV3-48P01763 117 aa4.86□□□□□ -1.63
LIG3-206ENST00000586058 IL4P05112 153 aa4.86□□□□□ -1.63
LIG3-206ENST00000586058 ARL14EPLP0DKL9 152 aa4.86□□□□□ -1.63
LIG3-206ENST00000586058 C8orf88P0DMB2 117 aa4.86□□□□□ -1.63
LIG3-206ENST00000586058 BCL2P10415 239 aa4.86□□□□□ -1.63
LIG3-206ENST00000586058 ORM2P19652 201 aa4.86□□□□□ -1.63
LIG3-206ENST00000586058 ZP3P21754 424 aa4.86□□□□□ -1.63
LIG3-206ENST00000586058 GPR183P32249 361 aa4.86□□□□□ -1.63
LIG3-206ENST00000586058 BMI1P35226 326 aa4.86□□□□□ -1.63
LIG3-206ENST00000586058 MFAP2P55001 183 aa4.86□□□□□ -1.63
LIG3-206ENST00000586058 FGF8P55075 233 aaPredicted RBP4.86□□□□□ -1.63
LIG3-206ENST00000586058 YPEL3P61236 119 aaPredicted RBP4.86□□□□□ -1.63
LIG3-206ENST00000586058 UBE2L3P68036 154 aaKnown RBP4.86□□□□□ -1.63
LIG3-206ENST00000586058 TM4SF20Q53R12 229 aa4.86□□□□□ -1.63
LIG3-206ENST00000586058 FBLN7Q53RD9 439 aa4.86□□□□□ -1.63
LIG3-206ENST00000586058 ASPHD1Q5U4P2 390 aa4.86□□□□□ -1.63
LIG3-206ENST00000586058 TEX38Q6PEX7 206 aa4.86□□□□□ -1.63
LIG3-206ENST00000586058 ZNF600Q6ZNG1 722 aa4.86□□□□□ -1.63
LIG3-206ENST00000586058 C19orf35Q6ZS72 473 aa4.86□□□□□ -1.63
LIG3-206ENST00000586058 LINC00305Q7Z4B0 112 aa4.86□□□□□ -1.63
LIG3-206ENST00000586058 OR4X2Q8NGF9 303 aa4.86□□□□□ -1.63
LIG3-206ENST00000586058 LYPD6BQ8NI32 183 aa4.86□□□□□ -1.63
LIG3-206ENST00000586058 SUN5Q8TC36 379 aa4.86□□□□□ -1.63
LIG3-206ENST00000586058 MBD3L1Q8WWY6 194 aa4.86□□□□□ -1.63
LIG3-206ENST00000586058 RNF125Q96EQ8 232 aa4.86□□□□□ -1.63
LIG3-206ENST00000586058 MS4A10Q96PG2 267 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms