RNA–Protein interactions for RNA: ENST00000583667.1

GGA3-217, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-217ENST00000583667 SLC25A33Q9BSK2 321 aa9.37□□□□□ -0.91
GGA3-217ENST00000583667 SCRT1Q9BWW7 348 aa9.37□□□□□ -0.91
GGA3-217ENST00000583667 HRH4Q9H3N8 390 aa9.37□□□□□ -0.91
GGA3-217ENST00000583667 COL7A1Q02388 2944 aa9.37□□□□□ -0.91
GGA3-217ENST00000583667 IGLV11-55A0A075B6I3 123 aa9.36□□□□□ -0.91
GGA3-217ENST00000583667 CTXND1A0A1B0GTU2 59 aa9.36□□□□□ -0.91
GGA3-217ENST00000583667 SMCO3A2RU48 225 aa9.36□□□□□ -0.91
GGA3-217ENST00000583667 ANKRD34BA5PLL1 514 aa9.36□□□□□ -0.91
GGA3-217ENST00000583667 DNAJC9-AS1A6NH13 148 aa9.36□□□□□ -0.91
GGA3-217ENST00000583667 KRBOX1C9JBD0 128 aa9.36□□□□□ -0.91
GGA3-217ENST00000583667 NDUFS6O75380 124 aaKnown RBP9.36□□□□□ -0.91
GGA3-217ENST00000583667 YIF1AO95070 293 aa9.36□□□□□ -0.91
GGA3-217ENST00000583667 REG1AP05451 166 aa9.36□□□□□ -0.91
GGA3-217ENST00000583667 HIST1H1BP16401 226 aaKnown RBP9.36□□□□□ -0.91
GGA3-217ENST00000583667 NDPQ00604 133 aa9.36□□□□□ -0.91
GGA3-217ENST00000583667 AKR1C1Q04828 323 aa9.36□□□□□ -0.91
GGA3-217ENST00000583667 ZNF616Q08AN1 781 aa9.36□□□□□ -0.91
GGA3-217ENST00000583667 MLANAQ16655 118 aa9.36□□□□□ -0.91
GGA3-217ENST00000583667 RBMS3Q6XE24 437 aaKnown RBP9.36□□□□□ -0.91
GGA3-217ENST00000583667 OR10G4Q8NGN3 311 aa9.36□□□□□ -0.91
GGA3-217ENST00000583667 OR10G9Q8NGN4 311 aa9.36□□□□□ -0.91
GGA3-217ENST00000583667 OR10G7Q8NGN6 311 aa9.36□□□□□ -0.91
GGA3-217ENST00000583667 OR4X1Q8NH49 305 aa9.36□□□□□ -0.91
GGA3-217ENST00000583667 OR5R1Q8NH85 324 aa9.36□□□□□ -0.91
GGA3-217ENST00000583667 WFDC12Q8WWY7 111 aa9.36□□□□□ -0.91
GGA3-217ENST00000583667 RCC1LQ96I51 464 aaKnown RBP9.36□□□□□ -0.91
GGA3-217ENST00000583667 ZNF48Q96MX3 618 aaPredicted RBP9.36□□□□□ -0.91
GGA3-217ENST00000583667 FAM210AQ96ND0 272 aa9.36□□□□□ -0.91
GGA3-217ENST00000583667 FANCD2OSQ96PS1 177 aa9.36□□□□□ -0.91
GGA3-217ENST00000583667 CITED1Q99966 193 aa9.36□□□□□ -0.91
GGA3-217ENST00000583667 ACTR3CQ9C0K3 210 aaPredicted RBP9.36□□□□□ -0.91
GGA3-217ENST00000583667 VSIRQ9H7M9 311 aa9.36□□□□□ -0.91
GGA3-217ENST00000583667 PXMP4Q9Y6I8 212 aa9.36□□□□□ -0.91
GGA3-217ENST00000583667 IGF1P05019 195 aa9.35□□□□□ -0.91
GGA3-217ENST00000583667 RNASE1P07998 156 aaKnown RBP9.35□□□□□ -0.91
GGA3-217ENST00000583667 FCGR2BP31994 310 aaPredicted RBP9.35□□□□□ -0.91
GGA3-217ENST00000583667 ZNF726P1Q15940 193 aa9.35□□□□□ -0.91
GGA3-217ENST00000583667 C19orf54Q5BKX5 351 aa9.35□□□□□ -0.91
GGA3-217ENST00000583667 OR2T6Q8NHC8 308 aa9.35□□□□□ -0.91
GGA3-217ENST00000583667 FAM110DQ8TAY7 271 aaPredicted RBP9.35□□□□□ -0.91
GGA3-217ENST00000583667 ABHD5Q8WTS1 349 aa9.35□□□□□ -0.91
GGA3-217ENST00000583667 SFT2D1Q8WV19 159 aa9.35□□□□□ -0.91
GGA3-217ENST00000583667 NPIPB3Q92617 1050 aa9.35□□□□□ -0.91
GGA3-217ENST00000583667 TRGV9Q99603 122 aa9.35□□□□□ -0.91
GGA3-217ENST00000583667 HSPB9Q9BQS6 159 aa9.35□□□□□ -0.91
GGA3-217ENST00000583667 SLC39A9Q9NUM3 307 aa9.35□□□□□ -0.91
GGA3-217ENST00000583667 THYN1Q9P016 225 aa9.35□□□□□ -0.91
GGA3-217ENST00000583667 IGKV1D-37A0A075B6S9 117 aa9.34□□□□□ -0.91
GGA3-217ENST00000583667 TCRBV4S1A1TA0A5B7 111 aa9.34□□□□□ -0.91
GGA3-217ENST00000583667 G3V4G9 280 aa9.34□□□□□ -0.91
GGA3-217ENST00000583667 H3BUX3 64 aa9.34□□□□□ -0.91
GGA3-217ENST00000583667 K7EIM0 57 aa9.34□□□□□ -0.91
GGA3-217ENST00000583667 MT-CO2P00403 227 aa9.34□□□□□ -0.91
GGA3-217ENST00000583667 IGHG2P01859 326 aa9.34□□□□□ -0.91
GGA3-217ENST00000583667 DEFA4P12838 97 aa9.34□□□□□ -0.91
GGA3-217ENST00000583667 OR10J1P30954 320 aa9.34□□□□□ -0.91
GGA3-217ENST00000583667 TAGLN2P37802 199 aaKnown RBP9.34□□□□□ -0.91
GGA3-217ENST00000583667 IER3P46695 156 aa9.34□□□□□ -0.91
GGA3-217ENST00000583667 B2MP61769 119 aa9.34□□□□□ -0.91
GGA3-217ENST00000583667 DEFB112Q30KQ8 113 aa9.34□□□□□ -0.91
GGA3-217ENST00000583667 KPRPQ5T749 579 aaPredicted RBP9.34□□□□□ -0.91
GGA3-217ENST00000583667 MIC13Q5XKP0 118 aa9.34□□□□□ -0.91
GGA3-217ENST00000583667 Q6YL49 198 aa9.34□□□□□ -0.91
GGA3-217ENST00000583667 CYP2G1PQ6ZSU1 146 aa9.34□□□□□ -0.91
GGA3-217ENST00000583667 REC114Q7Z4M0 266 aa9.34□□□□□ -0.91
GGA3-217ENST00000583667 STPG3Q8N7X2 389 aa9.34□□□□□ -0.91
GGA3-217ENST00000583667 MRAPQ8TCY5 172 aa9.34□□□□□ -0.91
GGA3-217ENST00000583667 MISP3Q96FF7 219 aa9.34□□□□□ -0.91
GGA3-217ENST00000583667 ATP6V0BQ99437 205 aa9.34□□□□□ -0.91
GGA3-217ENST00000583667 TXN2Q99757 166 aa9.34□□□□□ -0.91
GGA3-217ENST00000583667 PBDC1Q9BVG4 233 aa9.34□□□□□ -0.91
GGA3-217ENST00000583667 SOX21Q9Y651 276 aaPredicted RBP9.34□□□□□ -0.91
GGA3-217ENST00000583667 TRBV9A0A0B4J1U6 114 aa9.33□□□□□ -0.92
GGA3-217ENST00000583667 ELLP55199 621 aaPredicted RBP9.33□□□□□ -0.92
GGA3-217ENST00000583667 PLP1P60201 277 aa9.33□□□□□ -0.92
GGA3-217ENST00000583667 CCL20P78556 96 aa9.33□□□□□ -0.92
GGA3-217ENST00000583667 PEA15Q15121 130 aa9.33□□□□□ -0.92
GGA3-217ENST00000583667 C10orf91Q5T1B1 145 aa9.33□□□□□ -0.92
GGA3-217ENST00000583667 BCL6BQ8N143 479 aaPredicted RBP9.33□□□□□ -0.92
GGA3-217ENST00000583667 VN1R17PQ8TDU5 208 aa9.33□□□□□ -0.92
GGA3-217ENST00000583667 GATAD1Q8WUU5 269 aa9.33□□□□□ -0.92
GGA3-217ENST00000583667 RAB24Q969Q5 203 aa9.33□□□□□ -0.92
GGA3-217ENST00000583667 ACY3Q96HD9 319 aa9.33□□□□□ -0.92
GGA3-217ENST00000583667 RNF2Q99496 336 aa9.33□□□□□ -0.92
GGA3-217ENST00000583667 FAM103A1Q9BTL3 118 aaKnown RBP9.33□□□□□ -0.92
GGA3-217ENST00000583667 MRPL36Q9P0J6 103 aaKnown RBP9.33□□□□□ -0.92
GGA3-217ENST00000583667 TRAV30A0A087WSZ9 112 aa9.32□□□□□ -0.92
GGA3-217ENST00000583667 TMEM218A2RU14 115 aa9.32□□□□□ -0.92
GGA3-217ENST00000583667 PSMB11A5LHX3 300 aa9.32□□□□□ -0.92
GGA3-217ENST00000583667 I3L521 148 aa9.32□□□□□ -0.92
GGA3-217ENST00000583667 CLN5O75503 358 aa9.32□□□□□ -0.92
GGA3-217ENST00000583667 ZP3P21754 424 aa9.32□□□□□ -0.92
GGA3-217ENST00000583667 RND2P52198 227 aa9.32□□□□□ -0.92
GGA3-217ENST00000583667 KRTAP10-3P60369 221 aa9.32□□□□□ -0.92
GGA3-217ENST00000583667 RHOBP62745 196 aa9.32□□□□□ -0.92
GGA3-217ENST00000583667 GUK1Q16774 197 aa9.32□□□□□ -0.92
GGA3-217ENST00000583667 TNFRSF19Q9NS68 423 aa9.32□□□□□ -0.92
GGA3-217ENST00000583667 DYNC2H1Q8NCM8 4307 aaKnown RBP9.32□□□□□ -0.92
GGA3-217ENST00000583667 PLXNB1O43157 2135 aa9.31□□□□□ -0.92
GGA3-217ENST00000583667 ELOA3CA0A087WX78 387 aaPredicted RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 285 ms