RNA–Protein interactions for RNA: ENST00000581161.5

RTTN-206, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-206ENST00000581161 GFI1BQ5VTD9 330 aa3.6□□□□□ -1.83
RTTN-206ENST00000581161 MIC13Q5XKP0 118 aa3.6□□□□□ -1.83
RTTN-206ENST00000581161 CDPF1Q6NVV7 123 aa3.6□□□□□ -1.83
RTTN-206ENST00000581161 ZNF664Q8N3J9 261 aa3.6□□□□□ -1.83
RTTN-206ENST00000581161 GCSAMQ8N6F7 178 aa3.6□□□□□ -1.83
RTTN-206ENST00000581161 SPTSSBQ8NFR3 76 aa3.6□□□□□ -1.83
RTTN-206ENST00000581161 MESP1Q9BRJ9 268 aa3.6□□□□□ -1.83
RTTN-206ENST00000581161 PLSCR4Q9NRQ2 329 aa3.6□□□□□ -1.83
RTTN-206ENST00000581161 RELNP78509 3460 aa3.6□□□□□ -1.83
RTTN-206ENST00000581161 C5orf63A6NC05 138 aa3.6□□□□□ -1.83
RTTN-206ENST00000581161 IGHV2-70P01814 119 aa3.6□□□□□ -1.83
RTTN-206ENST00000581161 FGF8P55075 233 aaPredicted RBP3.6□□□□□ -1.83
RTTN-206ENST00000581161 KLF5Q13887 457 aaPredicted RBP3.6□□□□□ -1.83
RTTN-206ENST00000581161 ZNF124Q15973 351 aa3.6□□□□□ -1.83
RTTN-206ENST00000581161 IL17DQ8TAD2 202 aa3.6□□□□□ -1.83
RTTN-206ENST00000581161 KNL1Q8NG31 2342 aa3.6□□□□□ -1.83
RTTN-206ENST00000581161 IGKV1-9A0A0C4DH69 117 aa3.6□□□□□ -1.83
RTTN-206ENST00000581161 ZNF729A6NN14 1252 aaPredicted RBP3.6□□□□□ -1.83
RTTN-206ENST00000581161 CEACAM18A8MTB9 384 aa3.6□□□□□ -1.83
RTTN-206ENST00000581161 A8MWV9 139 aa3.6□□□□□ -1.83
RTTN-206ENST00000581161 TGFAP01135 160 aa3.6□□□□□ -1.83
RTTN-206ENST00000581161 LYL1P12980 280 aa3.6□□□□□ -1.83
RTTN-206ENST00000581161 DSCR9P59020 149 aa3.6□□□□□ -1.83
RTTN-206ENST00000581161 RND3P61587 244 aa3.6□□□□□ -1.83
RTTN-206ENST00000581161 TMEM187Q14656 261 aa3.6□□□□□ -1.83
RTTN-206ENST00000581161 Q6ZS52 159 aa3.6□□□□□ -1.83
RTTN-206ENST00000581161 ZNF414Q96IQ9 312 aa3.6□□□□□ -1.83
RTTN-206ENST00000581161 DSCR8Q96T75 97 aa3.6□□□□□ -1.83
RTTN-206ENST00000581161 C14orf132Q9NPU4 83 aa3.6□□□□□ -1.83
RTTN-206ENST00000581161 BDP1A6H8Y1 2624 aa3.6□□□□□ -1.83
RTTN-206ENST00000581161 TMEM238C9JI98 176 aa3.59□□□□□ -1.83
RTTN-206ENST00000581161 GLRXP35754 106 aa3.59□□□□□ -1.83
RTTN-206ENST00000581161 RND2P52198 227 aa3.59□□□□□ -1.83
RTTN-206ENST00000581161 UBE2V2Q15819 145 aa3.59□□□□□ -1.83
RTTN-206ENST00000581161 SIGLEC15Q6ZMC9 328 aa3.59□□□□□ -1.83
RTTN-206ENST00000581161 RETNQ9HD89 108 aa3.59□□□□□ -1.83
RTTN-206ENST00000581161 FAM90A7PA6NKC0 464 aa3.59□□□□□ -1.83
RTTN-206ENST00000581161 FAM90A22PA8MWA6 464 aa3.59□□□□□ -1.83
RTTN-206ENST00000581161 FAM90A12PA8MX19 464 aa3.59□□□□□ -1.83
RTTN-206ENST00000581161 FAM90A23PA8MXZ1 464 aa3.59□□□□□ -1.83
RTTN-206ENST00000581161 NPIPB4C9JG80 1138 aa3.59□□□□□ -1.83
RTTN-206ENST00000581161 PROP1O75360 226 aa3.59□□□□□ -1.83
RTTN-206ENST00000581161 CXCL1P09341 107 aa3.59□□□□□ -1.83
RTTN-206ENST00000581161 SPINK2P20155 84 aa3.59□□□□□ -1.83
RTTN-206ENST00000581161 HERV-K104P63124 156 aa3.59□□□□□ -1.83
RTTN-206ENST00000581161 PIGYQ3MUY2 71 aa3.59□□□□□ -1.83
RTTN-206ENST00000581161 TMEM155Q4W5P6 130 aa3.59□□□□□ -1.83
RTTN-206ENST00000581161 Q71RC1 249 aaPredicted RBP3.59□□□□□ -1.83
RTTN-206ENST00000581161 GPHA2Q96T91 129 aa3.59□□□□□ -1.83
RTTN-206ENST00000581161 ZNF581Q9P0T4 197 aa3.59□□□□□ -1.83
RTTN-206ENST00000581161 SPTBP11277 2137 aa3.59□□□□□ -1.83
RTTN-206ENST00000581161 F6UB75 175 aa3.59□□□□□ -1.83
RTTN-206ENST00000581161 WISP2O76076 250 aa3.59□□□□□ -1.83
RTTN-206ENST00000581161 CBLN1P23435 193 aa3.59□□□□□ -1.83
RTTN-206ENST00000581161 PYY3Q5JQD4 70 aa3.59□□□□□ -1.83
RTTN-206ENST00000581161 ZNF880Q6PDB4 577 aa3.59□□□□□ -1.83
RTTN-206ENST00000581161 DYNAPQ8N1N2 210 aa3.59□□□□□ -1.83
RTTN-206ENST00000581161 SMOC1Q9H4F8 434 aa3.59□□□□□ -1.83
RTTN-206ENST00000581161 ZZEF1O43149 2961 aa3.59□□□□□ -1.83
RTTN-206ENST00000581161 IGHV3-21A0A0B4J1V1 117 aa3.59□□□□□ -1.83
RTTN-206ENST00000581161 TRAV2A0A0B4J234 112 aa3.59□□□□□ -1.83
RTTN-206ENST00000581161 A0A1B0GW15 77 aa3.59□□□□□ -1.83
RTTN-206ENST00000581161 J3QR06 171 aa3.59□□□□□ -1.83
RTTN-206ENST00000581161 IGHV3-13P01766 116 aa3.59□□□□□ -1.83
RTTN-206ENST00000581161 IGHV3-7P01780 117 aa3.59□□□□□ -1.83
RTTN-206ENST00000581161 TRACP01848 142 aa3.59□□□□□ -1.83
RTTN-206ENST00000581161 GATA2P23769 480 aaPredicted RBP3.59□□□□□ -1.83
RTTN-206ENST00000581161 DDTP30046 118 aa3.59□□□□□ -1.83
RTTN-206ENST00000581161 RPL36AP83881 106 aaKnown RBP3.59□□□□□ -1.83
RTTN-206ENST00000581161 HGFACQ04756 655 aa3.59□□□□□ -1.83
RTTN-206ENST00000581161 GAGE2AQ6NT46 116 aa3.59□□□□□ -1.83
RTTN-206ENST00000581161 LHFPL1Q86WI0 220 aa3.59□□□□□ -1.83
RTTN-206ENST00000581161 RFESDQ8TAC1 157 aa3.59□□□□□ -1.83
RTTN-206ENST00000581161 RPL36ALQ969Q0 106 aaKnown RBP3.59□□□□□ -1.83
RTTN-206ENST00000581161 CLEC7AQ9BXN2 247 aa3.59□□□□□ -1.83
RTTN-206ENST00000581161 ALPK2Q86TB3 2170 aa3.59□□□□□ -1.84
RTTN-206ENST00000581161 PATE4P0C8F1 98 aa3.59□□□□□ -1.84
RTTN-206ENST00000581161 CFHR1Q03591 330 aa3.59□□□□□ -1.84
RTTN-206ENST00000581161 ERCC8Q13216 396 aa3.59□□□□□ -1.84
RTTN-206ENST00000581161 HIKESHIQ53FT3 197 aa3.59□□□□□ -1.84
RTTN-206ENST00000581161 MVB12AQ96EY5 273 aa3.59□□□□□ -1.84
RTTN-206ENST00000581161 VAX2Q9UIW0 290 aa3.59□□□□□ -1.84
RTTN-206ENST00000581161 IGHV2-5P01817 119 aa3.59□□□□□ -1.84
RTTN-206ENST00000581161 LIFP15018 202 aa3.59□□□□□ -1.84
RTTN-206ENST00000581161 EVI2AP22794 236 aa3.59□□□□□ -1.84
RTTN-206ENST00000581161 GPR183P32249 361 aa3.59□□□□□ -1.84
RTTN-206ENST00000581161 ODF1Q14990 250 aa3.59□□□□□ -1.84
RTTN-206ENST00000581161 TMEM30BQ3MIR4 351 aa3.59□□□□□ -1.84
RTTN-206ENST00000581161 QTRT1Q9BXR0 403 aaKnown RBP3.59□□□□□ -1.84
RTTN-206ENST00000581161 PLA2G3Q9NZ20 509 aa3.59□□□□□ -1.84
RTTN-206ENST00000581161 F5P12259 2224 aa3.58□□□□□ -1.84
RTTN-206ENST00000581161 DCHS1Q96JQ0 3298 aa3.58□□□□□ -1.84
RTTN-206ENST00000581161 FAM90A10PA6NDY2 464 aa3.58□□□□□ -1.84
RTTN-206ENST00000581161 FAM90A8PA6NJQ4 464 aa3.58□□□□□ -1.84
RTTN-206ENST00000581161 FOXI3A8MTJ6 420 aaPredicted RBP3.58□□□□□ -1.84
RTTN-206ENST00000581161 PRR33A8MZF0 331 aa3.58□□□□□ -1.84
RTTN-206ENST00000581161 FAM90A13PP0C7W8 464 aa3.58□□□□□ -1.84
RTTN-206ENST00000581161 FAM90A24PP0C7X0 464 aa3.58□□□□□ -1.84
RTTN-206ENST00000581161 SRD5A1P18405 259 aa3.58□□□□□ -1.84
RTTN-206ENST00000581161 PLEKHB2Q96CS7 222 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms