RNA–Protein interactions for RNA: ENST00000580170.5

PTPRM-211, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRM, Length 5,941 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-211ENST00000580170 IGHV1-18A0A0C4DH31 117 aa17.72■□□□□ 0.43
PTPRM-211ENST00000580170 FAM90A9PA6NNJ1 464 aa17.72■□□□□ 0.43
PTPRM-211ENST00000580170 SLC50A1Q9BRV3 221 aa17.72■□□□□ 0.43
PTPRM-211ENST00000580170 SEC16AO15027 2179 aa17.72■□□□□ 0.43
PTPRM-211ENST00000580170 IGKV1-12A0A0C4DH73 117 aa17.72■□□□□ 0.43
PTPRM-211ENST00000580170 RBMY1BA6NDE4 496 aaKnown RBP17.72■□□□□ 0.43
PTPRM-211ENST00000580170 RBMY1EA6NEQ0 496 aaKnown RBP17.72■□□□□ 0.43
PTPRM-211ENST00000580170 IGKV1D-12P01611 117 aa17.72■□□□□ 0.43
PTPRM-211ENST00000580170 RBMY1DP0C7P1 496 aaKnown RBP17.72■□□□□ 0.43
PTPRM-211ENST00000580170 RBMY1A1P0DJD3 496 aaKnown RBP17.72■□□□□ 0.43
PTPRM-211ENST00000580170 RBMY1CP0DJD4 496 aa17.72■□□□□ 0.43
PTPRM-211ENST00000580170 CD24P25063 80 aa17.72■□□□□ 0.43
PTPRM-211ENST00000580170 CDKN1AP38936 164 aa17.72■□□□□ 0.43
PTPRM-211ENST00000580170 SPRR3Q9UBC9 169 aa17.72■□□□□ 0.43
PTPRM-211ENST00000580170 PSG8Q9UQ74 426 aa17.72■□□□□ 0.43
PTPRM-211ENST00000580170 CRYGSP22914 178 aa17.71■□□□□ 0.43
PTPRM-211ENST00000580170 COLCA1Q6ZS62 124 aa17.71■□□□□ 0.43
PTPRM-211ENST00000580170 SLC25A2Q9BXI2 301 aa17.71■□□□□ 0.43
PTPRM-211ENST00000580170 REG4Q9BYZ8 158 aa17.71■□□□□ 0.43
PTPRM-211ENST00000580170 GZMBP10144 247 aa17.71■□□□□ 0.43
PTPRM-211ENST00000580170 MESP1Q9BRJ9 268 aa17.71■□□□□ 0.43
PTPRM-211ENST00000580170 DNAJC13O75165 2243 aa17.71■□□□□ 0.43
PTPRM-211ENST00000580170 CD7P09564 240 aa17.71■□□□□ 0.43
PTPRM-211ENST00000580170 A0A0G2JMZ2 1700 aa17.7■□□□□ 0.42
PTPRM-211ENST00000580170 LRRC37A2A6NM11 1700 aa17.7■□□□□ 0.42
PTPRM-211ENST00000580170 TEX38Q6PEX7 206 aa17.7■□□□□ 0.42
PTPRM-211ENST00000580170 OR10W1Q8NGF6 305 aa17.7■□□□□ 0.42
PTPRM-211ENST00000580170 WNK3Q9BYP7 1800 aa17.7■□□□□ 0.42
PTPRM-211ENST00000580170 ERVK11-1P61568 191 aa17.7■□□□□ 0.42
PTPRM-211ENST00000580170 CNTFRP26992 372 aa17.7■□□□□ 0.42
PTPRM-211ENST00000580170 ZCCHC24Q8N2G6 241 aaKnown RBP17.7■□□□□ 0.42
PTPRM-211ENST00000580170 IGKCP01834 107 aa17.7■□□□□ 0.42
PTPRM-211ENST00000580170 SRSF6Q13247 344 aaKnown RBP17.7■□□□□ 0.42
PTPRM-211ENST00000580170 CYTL1Q9NRR1 136 aa17.7■□□□□ 0.42
PTPRM-211ENST00000580170 SRSF1Q07955 248 aaKnown RBP eCLIP17.69■□□□□ 0.42
PTPRM-211ENST00000580170 OR9G4Q8NGQ1 327 aa17.69■□□□□ 0.42
PTPRM-211ENST00000580170 WDR83OSQ9Y284 106 aa17.69■□□□□ 0.42
PTPRM-211ENST00000580170 MST1P26927 711 aa17.69■□□□□ 0.42
PTPRM-211ENST00000580170 TRAV5A0A0B4J249 113 aa17.69■□□□□ 0.42
PTPRM-211ENST00000580170 DOCK4Q8N1I0 1966 aa17.69■□□□□ 0.42
PTPRM-211ENST00000580170 IGKV3D-20A0A0C4DH25 116 aa17.68■□□□□ 0.42
PTPRM-211ENST00000580170 SRSF7Q16629 238 aaKnown RBP eCLIP17.68■□□□□ 0.42
PTPRM-211ENST00000580170 MRPL52Q86TS9 123 aaKnown RBP17.68■□□□□ 0.42
PTPRM-211ENST00000580170 EVI2AP22794 236 aa17.68■□□□□ 0.42
PTPRM-211ENST00000580170 PRTN3P24158 256 aa17.68■□□□□ 0.42
PTPRM-211ENST00000580170 LHFPL4Q7Z7J7 247 aa17.68■□□□□ 0.42
PTPRM-211ENST00000580170 JMJD8Q96S16 334 aa17.68■□□□□ 0.42
PTPRM-211ENST00000580170 SELENOKQ9Y6D0 94 aa17.68■□□□□ 0.42
PTPRM-211ENST00000580170 TRAV2A0A0B4J234 112 aa17.68■□□□□ 0.42
PTPRM-211ENST00000580170 ZNF815PA8K554 130 aa17.68■□□□□ 0.42
PTPRM-211ENST00000580170 PPIFP30405 207 aaKnown RBP17.68■□□□□ 0.42
PTPRM-211ENST00000580170 BRWD3Q6RI45 1802 aa17.68■□□□□ 0.42
PTPRM-211ENST00000580170 A0A1W2PRX2 142 aa17.68■□□□□ 0.42
PTPRM-211ENST00000580170 EFNA2O43921 213 aa17.67■□□□□ 0.42
PTPRM-211ENST00000580170 TREML4Q6UXN2 200 aa17.67■□□□□ 0.42
PTPRM-211ENST00000580170 PSG1P11464 419 aa17.67■□□□□ 0.42
PTPRM-211ENST00000580170 TMEM155Q4W5P6 130 aa17.67■□□□□ 0.42
PTPRM-211ENST00000580170 TSKUQ8WUA8 353 aa17.67■□□□□ 0.42
PTPRM-211ENST00000580170 CRIM1Q9NZV1 1036 aa17.67■□□□□ 0.42
PTPRM-211ENST00000580170 TRAV21A0A0B4J279 112 aa17.67■□□□□ 0.42
PTPRM-211ENST00000580170 PEMTQ9UBM1 199 aa17.67■□□□□ 0.42
PTPRM-211ENST00000580170 LHFPL1Q86WI0 220 aa17.67■□□□□ 0.42
PTPRM-211ENST00000580170 IGKV1-27A0A075B6S5 117 aa17.66■□□□□ 0.42
PTPRM-211ENST00000580170 LYNX1G3V0Z9 82 aa17.66■□□□□ 0.42
PTPRM-211ENST00000580170 LYNX1P0DP58 116 aa17.66■□□□□ 0.42
PTPRM-211ENST00000580170 RHOGP84095 191 aa17.66■□□□□ 0.42
PTPRM-211ENST00000580170 C8orf46Q8TAG6 207 aa17.66■□□□□ 0.42
PTPRM-211ENST00000580170 NABP1Q96AH0 204 aa17.66■□□□□ 0.42
PTPRM-211ENST00000580170 RP1P56715 2156 aa17.66■□□□□ 0.42
PTPRM-211ENST00000580170 TDGF1P3P51864 188 aa17.66■□□□□ 0.42
PTPRM-211ENST00000580170 SUPT4H1P63272 117 aaKnown RBP17.66■□□□□ 0.42
PTPRM-211ENST00000580170 LOC285556D6RIA3 1793 aa17.66■□□□□ 0.42
PTPRM-211ENST00000580170 TRGV2A0A075B6R0 118 aa17.66■□□□□ 0.42
PTPRM-211ENST00000580170 PRB4P10163 310 aaPredicted RBP17.66■□□□□ 0.42
PTPRM-211ENST00000580170 IFI27P40305 119 aaPredicted RBP17.66■□□□□ 0.42
PTPRM-211ENST00000580170 IFI27L1Q96BM0 104 aa17.66■□□□□ 0.42
PTPRM-211ENST00000580170 RNASE6Q93091 150 aaKnown RBP17.66■□□□□ 0.42
PTPRM-211ENST00000580170 SLC25A15Q9Y619 301 aa17.66■□□□□ 0.42
PTPRM-211ENST00000580170 TDGF1P13385 188 aa17.65■□□□□ 0.42
PTPRM-211ENST00000580170 ZNF664Q8N3J9 261 aa17.65■□□□□ 0.42
PTPRM-211ENST00000580170 TIMP3P35625 211 aa17.65■□□□□ 0.42
PTPRM-211ENST00000580170 SSBP2P81877 361 aaPredicted RBP17.65■□□□□ 0.42
PTPRM-211ENST00000580170 SPATA31B1PQ5VZV4 182 aa17.65■□□□□ 0.42
PTPRM-211ENST00000580170 TMEM167AQ8TBQ9 72 aa17.65■□□□□ 0.42
PTPRM-211ENST00000580170 CHTOPQ9Y3Y2 248 aaKnown RBP17.65■□□□□ 0.42
PTPRM-211ENST00000580170 NXT2Q9NPJ8 142 aaKnown RBP17.65■□□□□ 0.42
PTPRM-211ENST00000580170 TIMM23O14925 209 aa17.65■□□□□ 0.42
PTPRM-211ENST00000580170 IGHV1-46P01743 117 aa17.65■□□□□ 0.42
PTPRM-211ENST00000580170 LCTP09848 1927 aa17.65■□□□□ 0.42
PTPRM-211ENST00000580170 KIR3DL3Q8N743 410 aa17.64■□□□□ 0.41
PTPRM-211ENST00000580170 ATXN8Q156A1 80 aa17.64■□□□□ 0.41
PTPRM-211ENST00000580170 YAE1D1Q9NRH1 226 aa17.64■□□□□ 0.41
PTPRM-211ENST00000580170 CASP8AP2Q9UKL3 1982 aa17.64■□□□□ 0.41
PTPRM-211ENST00000580170 MPV17L2Q567V2 206 aa17.64■□□□□ 0.41
PTPRM-211ENST00000580170 CFAP161Q6P656 301 aa17.64■□□□□ 0.41
PTPRM-211ENST00000580170 TRAV8-1A0A0A6YYK1 113 aa17.63■□□□□ 0.41
PTPRM-211ENST00000580170 EREGO14944 169 aa17.63■□□□□ 0.41
PTPRM-211ENST00000580170 ZFP36L1Q07352 338 aaKnown RBP17.63■□□□□ 0.41
PTPRM-211ENST00000580170 FOXL1Q12952 345 aa17.63■□□□□ 0.41
PTPRM-211ENST00000580170 BCL6BQ8N143 479 aaPredicted RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms