RNA–Protein interactions for RNA: ENST00000577085.1

SF3B3-215, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-215ENST00000577085 Q8WTZ3 238 aa11.51□□□□□ -0.57
SF3B3-215ENST00000577085 DEDD2Q8WXF8 326 aa11.51□□□□□ -0.57
SF3B3-215ENST00000577085 TRIM63Q969Q1 353 aa11.51□□□□□ -0.57
SF3B3-215ENST00000577085 ZNF414Q96IQ9 312 aa11.51□□□□□ -0.57
SF3B3-215ENST00000577085 SLC25A21Q9BQT8 299 aaPredicted RBP11.51□□□□□ -0.57
SF3B3-215ENST00000577085 MS4A6AQ9H2W1 248 aa11.51□□□□□ -0.57
SF3B3-215ENST00000577085 VSIRQ9H7M9 311 aa11.51□□□□□ -0.57
SF3B3-215ENST00000577085 MRPL36Q9P0J6 103 aaKnown RBP11.51□□□□□ -0.57
SF3B3-215ENST00000577085 RABAC1Q9UI14 185 aa11.51□□□□□ -0.57
SF3B3-215ENST00000577085 U3KQ87 197 aa11.51□□□□□ -0.57
SF3B3-215ENST00000577085 ZNF701M0R085 212 aaPredicted RBP11.5□□□□□ -0.57
SF3B3-215ENST00000577085 APOHP02749 345 aaPredicted RBP11.5□□□□□ -0.57
SF3B3-215ENST00000577085 OR10J1P30954 320 aa11.5□□□□□ -0.57
SF3B3-215ENST00000577085 EIF2B2P49770 351 aaKnown RBP11.5□□□□□ -0.57
SF3B3-215ENST00000577085 SUPT4H1P63272 117 aaKnown RBP11.5□□□□□ -0.57
SF3B3-215ENST00000577085 FAM90A2PQ658T7 463 aa11.5□□□□□ -0.57
SF3B3-215ENST00000577085 PRSS54Q6PEW0 395 aa11.5□□□□□ -0.57
SF3B3-215ENST00000577085 ACY3Q96HD9 319 aa11.5□□□□□ -0.57
SF3B3-215ENST00000577085 TP53TG1Q9Y2A0 90 aa11.5□□□□□ -0.57
SF3B3-215ENST00000577085 DNAH7Q8WXX0 4024 aa11.49□□□□□ -0.57
SF3B3-215ENST00000577085 DUXBA0A1W2PPF3 345 aa11.49□□□□□ -0.57
SF3B3-215ENST00000577085 IFNA4P05014 189 aa11.49□□□□□ -0.57
SF3B3-215ENST00000577085 ZNF79Q15937 498 aa11.49□□□□□ -0.57
SF3B3-215ENST00000577085 TRIQKQ629K1 86 aa11.49□□□□□ -0.57
SF3B3-215ENST00000577085 CCDC190Q86UF4 302 aa11.49□□□□□ -0.57
SF3B3-215ENST00000577085 STXBP6Q8NFX7 210 aa11.49□□□□□ -0.57
SF3B3-215ENST00000577085 RBKSQ9H477 322 aa11.49□□□□□ -0.57
SF3B3-215ENST00000577085 MAP6D1Q9H9H5 199 aa11.49□□□□□ -0.57
SF3B3-215ENST00000577085 HSPB7Q9UBY9 170 aa11.49□□□□□ -0.57
SF3B3-215ENST00000577085 RYR3Q15413 4870 aa11.48□□□□□ -0.57
SF3B3-215ENST00000577085 IGKV1-17P01599 117 aa11.48□□□□□ -0.57
SF3B3-215ENST00000577085 P2RY1P47900 373 aa11.48□□□□□ -0.57
SF3B3-215ENST00000577085 CENPSQ8N2Z9 138 aa11.48□□□□□ -0.57
SF3B3-215ENST00000577085 NPIPB3Q92617 1050 aa11.48□□□□□ -0.57
SF3B3-215ENST00000577085 RBM38Q9H0Z9 239 aaKnown RBP11.48□□□□□ -0.57
SF3B3-215ENST00000577085 CSTL1Q9H114 145 aa11.48□□□□□ -0.57
SF3B3-215ENST00000577085 TRAV2A0A0B4J234 112 aa11.47□□□□□ -0.57
SF3B3-215ENST00000577085 LCE6AA0A183 80 aa11.47□□□□□ -0.57
SF3B3-215ENST00000577085 MPTX1A8MV57 137 aa11.47□□□□□ -0.57
SF3B3-215ENST00000577085 JTBO76095 146 aa11.47□□□□□ -0.57
SF3B3-215ENST00000577085 HNRNPCP07910 306 aaKnown RBP eCLIP11.47□□□□□ -0.574e-6■■■□□ 18.9
SF3B3-215ENST00000577085 IGLC1P0CG04 106 aa11.47□□□□□ -0.57
SF3B3-215ENST00000577085 RD3LP0DJH9 198 aa11.47□□□□□ -0.57
SF3B3-215ENST00000577085 CRYBB3P26998 211 aa11.47□□□□□ -0.57
SF3B3-215ENST00000577085 ATP5IP56385 69 aaPredicted RBP11.47□□□□□ -0.57
SF3B3-215ENST00000577085 YPEL3P61236 119 aaPredicted RBP11.47□□□□□ -0.57
SF3B3-215ENST00000577085 ZNF124Q15973 351 aa11.47□□□□□ -0.57
SF3B3-215ENST00000577085 LILRB2Q8N423 598 aa11.47□□□□□ -0.57
SF3B3-215ENST00000577085 TMEM217Q8N7C4 229 aa11.47□□□□□ -0.57
SF3B3-215ENST00000577085 PAIP2BQ9ULR5 123 aaKnown RBP11.47□□□□□ -0.57
SF3B3-215ENST00000577085 A0A0J9YWU9 116 aa11.46□□□□□ -0.57
SF3B3-215ENST00000577085 CXorf65A6NEN9 183 aa11.46□□□□□ -0.57
SF3B3-215ENST00000577085 HELTA6NFD8 242 aa11.46□□□□□ -0.57
SF3B3-215ENST00000577085 IL4P05112 153 aa11.46□□□□□ -0.57
SF3B3-215ENST00000577085 AP2S1P53680 142 aaPredicted RBP11.46□□□□□ -0.57
SF3B3-215ENST00000577085 DEFB131AP59861 70 aa11.46□□□□□ -0.57
SF3B3-215ENST00000577085 RAB11AP62491 216 aa11.46□□□□□ -0.57
SF3B3-215ENST00000577085 RPP30P78346 268 aaKnown RBP11.46□□□□□ -0.57
SF3B3-215ENST00000577085 RBMS2Q15434 407 aaKnown RBP11.46□□□□□ -0.57
SF3B3-215ENST00000577085 LEMD1Q68G75 181 aa11.46□□□□□ -0.57
SF3B3-215ENST00000577085 LYG2Q86SG7 212 aa11.46□□□□□ -0.57
SF3B3-215ENST00000577085 RNF183Q96D59 192 aa11.46□□□□□ -0.57
SF3B3-215ENST00000577085 SLC35E1Q96K37 410 aa11.46□□□□□ -0.57
SF3B3-215ENST00000577085 TMED3Q9Y3Q3 217 aa11.46□□□□□ -0.57
SF3B3-215ENST00000577085 ZFP92A6NM28 416 aa11.45□□□□□ -0.58
SF3B3-215ENST00000577085 CENPXA8MT69 81 aa11.45□□□□□ -0.58
SF3B3-215ENST00000577085 MED6O75586 246 aa11.45□□□□□ -0.58
SF3B3-215ENST00000577085 SFT2D2O95562 160 aa11.45□□□□□ -0.58
SF3B3-215ENST00000577085 PPP1R1AQ13522 171 aa11.45□□□□□ -0.58
SF3B3-215ENST00000577085 STHQ8IWL8 128 aa11.45□□□□□ -0.58
SF3B3-215ENST00000577085 TMEM170AQ8WVE7 144 aa11.45□□□□□ -0.58
SF3B3-215ENST00000577085 SRRQ9GZT4 340 aa11.45□□□□□ -0.58
SF3B3-215ENST00000577085 PFDN2Q9UHV9 154 aa11.45□□□□□ -0.58
SF3B3-215ENST00000577085 LINC00854A0A1B0GVQ3 168 aa11.44□□□□□ -0.58
SF3B3-215ENST00000577085 NAP1L6A6NFF2 107 aa11.44□□□□□ -0.58
SF3B3-215ENST00000577085 TOMM40O96008 361 aa11.44□□□□□ -0.58
SF3B3-215ENST00000577085 CA1P00915 261 aaPredicted RBP11.44□□□□□ -0.58
SF3B3-215ENST00000577085 FABP1P07148 127 aa11.44□□□□□ -0.58
SF3B3-215ENST00000577085 PMS2P11Q13670 270 aa11.44□□□□□ -0.58
SF3B3-215ENST00000577085 LRTM2Q8N967 370 aa11.44□□□□□ -0.58
SF3B3-215ENST00000577085 CIB3Q96Q77 187 aaPredicted RBP11.44□□□□□ -0.58
SF3B3-215ENST00000577085 FAM90A26D6RGX4 464 aa11.43□□□□□ -0.58
SF3B3-215ENST00000577085 HOXB5P09067 269 aa11.43□□□□□ -0.58
SF3B3-215ENST00000577085 IAPPP10997 89 aa11.43□□□□□ -0.58
SF3B3-215ENST00000577085 SLC25A6P12236 298 aa11.43□□□□□ -0.58
SF3B3-215ENST00000577085 GPX4P36969 197 aaPredicted RBP11.43□□□□□ -0.58
SF3B3-215ENST00000577085 NUP62P37198 522 aaPredicted RBP11.43□□□□□ -0.58
SF3B3-215ENST00000577085 UBE2MP61081 183 aaKnown RBP11.43□□□□□ -0.58
SF3B3-215ENST00000577085 DHRS2Q13268 280 aa11.43□□□□□ -0.58
SF3B3-215ENST00000577085 GATAD1Q8WUU5 269 aa11.43□□□□□ -0.58
SF3B3-215ENST00000577085 PBDC1Q9BVG4 233 aa11.43□□□□□ -0.58
SF3B3-215ENST00000577085 K7EQG2 157 aa11.42□□□□□ -0.58
SF3B3-215ENST00000577085 ZNF688P0C7X2 276 aa11.42□□□□□ -0.58
SF3B3-215ENST00000577085 PSG1P11464 419 aa11.42□□□□□ -0.58
SF3B3-215ENST00000577085 USF2Q15853 346 aaPredicted RBP11.42□□□□□ -0.58
SF3B3-215ENST00000577085 FAM24BQ8N5W8 94 aa11.42□□□□□ -0.58
SF3B3-215ENST00000577085 OR51G1Q8NGK1 321 aa11.42□□□□□ -0.58
SF3B3-215ENST00000577085 COQ8AQ8NI60 647 aa11.42□□□□□ -0.58
SF3B3-215ENST00000577085 RARRES2Q99969 163 aa11.42□□□□□ -0.58
SF3B3-215ENST00000577085 NUPR2A6NF83 97 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms