RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 HIST1H2BLQ99880 126 aa4.04□□□□□ -1.76
SF3B3-214ENST00000572365 SLC35A5Q9BS91 424 aa4.04□□□□□ -1.76
SF3B3-214ENST00000572365 MRPL13Q9BYD1 178 aaKnown RBP4.04□□□□□ -1.76
SF3B3-214ENST00000572365 OCR1Q9BZK8 76 aa4.04□□□□□ -1.76
SF3B3-214ENST00000572365 NMNAT2Q9BZQ4 307 aa4.04□□□□□ -1.76
SF3B3-214ENST00000572365 ELL3Q9HB65 397 aaPredicted RBP4.04□□□□□ -1.76
SF3B3-214ENST00000572365 RAB18Q9NP72 206 aa4.04□□□□□ -1.76
SF3B3-214ENST00000572365 SLC2A9Q9NRM0 540 aa4.04□□□□□ -1.76
SF3B3-214ENST00000572365 GSKIPQ9P0R6 139 aa4.04□□□□□ -1.76
SF3B3-214ENST00000572365 KLHDC2Q9Y2U9 406 aa4.04□□□□□ -1.76
SF3B3-214ENST00000572365 SMAD5-AS1Q9Y6J3 95 aa4.04□□□□□ -1.76
SF3B3-214ENST00000572365 VPS13DQ5THJ4 4388 aa4.03□□□□□ -1.76
SF3B3-214ENST00000572365 TRAV36DV7A0A075B6V5 113 aa4.03□□□□□ -1.76
SF3B3-214ENST00000572365 TMEM235A6NFC5 223 aa4.03□□□□□ -1.76
SF3B3-214ENST00000572365 LRRC30A6NM36 301 aa4.03□□□□□ -1.76
SF3B3-214ENST00000572365 IFITM5A6NNB3 132 aa4.03□□□□□ -1.76
SF3B3-214ENST00000572365 DHRS7CA6NNS2 312 aa4.03□□□□□ -1.76
SF3B3-214ENST00000572365 F6UZH7 168 aa4.03□□□□□ -1.76
SF3B3-214ENST00000572365 DCTN6O00399 190 aa4.03□□□□□ -1.76
SF3B3-214ENST00000572365 CYB5BO43169 146 aa4.03□□□□□ -1.76
SF3B3-214ENST00000572365 CYB5AP00167 134 aa4.03□□□□□ -1.76
SF3B3-214ENST00000572365 LHBP01229 141 aa4.03□□□□□ -1.76
SF3B3-214ENST00000572365 HSPB1P04792 205 aaKnown RBP4.03□□□□□ -1.76
SF3B3-214ENST00000572365 NBEAP1P0C6P0 100 aa4.03□□□□□ -1.76
SF3B3-214ENST00000572365 GP9P14770 177 aa4.03□□□□□ -1.76
SF3B3-214ENST00000572365 ZBTB25P24278 435 aa4.03□□□□□ -1.76
SF3B3-214ENST00000572365 COX7A1P24310 79 aa4.03□□□□□ -1.76
SF3B3-214ENST00000572365 BRS3P32247 399 aa4.03□□□□□ -1.76
SF3B3-214ENST00000572365 CAMLGP49069 296 aa4.03□□□□□ -1.76
SF3B3-214ENST00000572365 RAB7AP51149 207 aa4.03□□□□□ -1.76
SF3B3-214ENST00000572365 RND2P52198 227 aa4.03□□□□□ -1.76
SF3B3-214ENST00000572365 TAS2R20P59543 309 aa4.03□□□□□ -1.76
SF3B3-214ENST00000572365 AKR1C1Q04828 323 aa4.03□□□□□ -1.76
SF3B3-214ENST00000572365 DMKNQ6E0U4 476 aaPredicted RBP4.03□□□□□ -1.76
SF3B3-214ENST00000572365 HCP5Q6MZN7 132 aa4.03□□□□□ -1.76
SF3B3-214ENST00000572365 DPY19L2P2Q6ZN68 376 aa4.03□□□□□ -1.76
SF3B3-214ENST00000572365 C11orf42Q8N5U0 333 aa4.03□□□□□ -1.76
SF3B3-214ENST00000572365 FAM216BQ8N7L0 139 aa4.03□□□□□ -1.76
SF3B3-214ENST00000572365 OR51L1Q8NGJ5 315 aa4.03□□□□□ -1.76
SF3B3-214ENST00000572365 OR51S1Q8NGJ8 323 aa4.03□□□□□ -1.76
SF3B3-214ENST00000572365 OR13G1Q8NGZ3 307 aa4.03□□□□□ -1.76
SF3B3-214ENST00000572365 GPX8Q8TED1 209 aa4.03□□□□□ -1.76
SF3B3-214ENST00000572365 PTX4Q96A99 478 aa4.03□□□□□ -1.76
SF3B3-214ENST00000572365 SMIM19Q96E16 107 aa4.03□□□□□ -1.76
SF3B3-214ENST00000572365 YPEL4Q96NS1 127 aa4.03□□□□□ -1.76
SF3B3-214ENST00000572365 WFDC6Q9BQY6 131 aa4.03□□□□□ -1.76
SF3B3-214ENST00000572365 ADAT1Q9BUB4 502 aaKnown RBP4.03□□□□□ -1.76
SF3B3-214ENST00000572365 PARD6GQ9BYG4 376 aaPredicted RBP4.03□□□□□ -1.76
SF3B3-214ENST00000572365 OR2H1Q9GZK4 316 aa4.03□□□□□ -1.76
SF3B3-214ENST00000572365 MAGT1Q9H0U3 335 aa4.03□□□□□ -1.76
SF3B3-214ENST00000572365 ZNF430Q9H8G1 570 aaPredicted RBP4.03□□□□□ -1.76
SF3B3-214ENST00000572365 Q9HAA7 133 aa4.03□□□□□ -1.76
SF3B3-214ENST00000572365 RETNQ9HD89 108 aa4.03□□□□□ -1.76
SF3B3-214ENST00000572365 MRPL22Q9NWU5 206 aaKnown RBP4.03□□□□□ -1.76
SF3B3-214ENST00000572365 FKBP11Q9NYL4 201 aa4.03□□□□□ -1.76
SF3B3-214ENST00000572365 BET1LQ9NYM9 111 aa4.03□□□□□ -1.76
SF3B3-214ENST00000572365 LINC00527Q9UJ94 153 aa4.03□□□□□ -1.76
SF3B3-214ENST00000572365 FLVCR2Q9UPI3 526 aa4.03□□□□□ -1.76
SF3B3-214ENST00000572365 ZNF443Q9Y2A4 671 aaPredicted RBP4.03□□□□□ -1.76
SF3B3-214ENST00000572365 UBR4Q5T4S7 5183 aa4.02□□□□□ -1.77
SF3B3-214ENST00000572365 SRRM2Q9UQ35 2752 aaKnown RBP4.02□□□□□ -1.77
SF3B3-214ENST00000572365 A0A0A6YYD4 124 aa4.02□□□□□ -1.77
SF3B3-214ENST00000572365 LOC102725191A0A1B0GVB3 256 aa4.02□□□□□ -1.77
SF3B3-214ENST00000572365 A0A1B0GWA3 101 aa4.02□□□□□ -1.77
SF3B3-214ENST00000572365 RAMP3O60896 148 aa4.02□□□□□ -1.77
SF3B3-214ENST00000572365 HLA-AP01891 365 aaKnown RBP4.02□□□□□ -1.77
SF3B3-214ENST00000572365 THY1P04216 161 aa4.02□□□□□ -1.77
SF3B3-214ENST00000572365 DBIP07108 87 aaKnown RBP4.02□□□□□ -1.77
SF3B3-214ENST00000572365 TRGC1P0CF51 173 aa4.02□□□□□ -1.77
SF3B3-214ENST00000572365 PGA4P0DJD7 388 aa4.02□□□□□ -1.77
SF3B3-214ENST00000572365 PGA3P0DJD8 388 aa4.02□□□□□ -1.77
SF3B3-214ENST00000572365 PGAM2P15259 253 aa4.02□□□□□ -1.77
SF3B3-214ENST00000572365 KITLGP21583 273 aa4.02□□□□□ -1.77
SF3B3-214ENST00000572365 CDK2P24941 298 aa4.02□□□□□ -1.77
SF3B3-214ENST00000572365 CD1BP29016 333 aa4.02□□□□□ -1.77
SF3B3-214ENST00000572365 GPR4P46093 362 aa4.02□□□□□ -1.77
SF3B3-214ENST00000572365 UBE2E1P51965 193 aa4.02□□□□□ -1.77
SF3B3-214ENST00000572365 HTD2P86397 168 aa4.02□□□□□ -1.77
SF3B3-214ENST00000572365 ELOBQ15370 118 aa4.02□□□□□ -1.77
SF3B3-214ENST00000572365 TMEM41BQ5BJD5 291 aa4.02□□□□□ -1.77
SF3B3-214ENST00000572365 LY6G6FQ5SQ64 297 aa4.02□□□□□ -1.77
SF3B3-214ENST00000572365 NCR3LG1Q68D85 454 aa4.02□□□□□ -1.77
SF3B3-214ENST00000572365 MKXQ8IYA7 352 aa4.02□□□□□ -1.77
SF3B3-214ENST00000572365 TCTEX1D1Q8N7M0 179 aa4.02□□□□□ -1.77
SF3B3-214ENST00000572365 LY6G5BQ8NDX9 201 aa4.02□□□□□ -1.77
SF3B3-214ENST00000572365 OR51A2Q8NGJ7 313 aa4.02□□□□□ -1.77
SF3B3-214ENST00000572365 OR5L1Q8NGL2 311 aa4.02□□□□□ -1.77
SF3B3-214ENST00000572365 OR4C16Q8NGL9 310 aa4.02□□□□□ -1.77
SF3B3-214ENST00000572365 OR11L1Q8NGX0 322 aa4.02□□□□□ -1.77
SF3B3-214ENST00000572365 OR2T27Q8NH04 317 aa4.02□□□□□ -1.77
SF3B3-214ENST00000572365 LGALS14Q8TCE9 139 aa4.02□□□□□ -1.77
SF3B3-214ENST00000572365 RPUSD4Q96CM3 377 aaKnown RBP4.02□□□□□ -1.77
SF3B3-214ENST00000572365 CPNE2Q96FN4 548 aaPredicted RBP4.02□□□□□ -1.77
SF3B3-214ENST00000572365 OR5B12Q96R08 314 aa4.02□□□□□ -1.77
SF3B3-214ENST00000572365 RNF2Q99496 336 aa4.02□□□□□ -1.77
SF3B3-214ENST00000572365 P2RX4Q99571 388 aa4.02□□□□□ -1.77
SF3B3-214ENST00000572365 PKIBQ9C010 78 aa4.02□□□□□ -1.77
SF3B3-214ENST00000572365 GFRA4Q9GZZ7 299 aa4.02□□□□□ -1.77
SF3B3-214ENST00000572365 BANF2Q9H503 90 aa4.02□□□□□ -1.77
SF3B3-214ENST00000572365 TMEM231Q9H6L2 316 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 143.5 ms