RNA–Protein interactions for RNA: ENST00000571554.5

RAB40B-204, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB40B, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-204ENST00000571554 P2RY1P47900 373 aa10.11□□□□□ -0.79
RAB40B-204ENST00000571554 TNFRSF9Q07011 255 aa10.11□□□□□ -0.79
RAB40B-204ENST00000571554 RBMS2Q15434 407 aaKnown RBP10.11□□□□□ -0.79
RAB40B-204ENST00000571554 PYDC2Q56P42 97 aa10.11□□□□□ -0.79
RAB40B-204ENST00000571554 TMED4Q7Z7H5 227 aa10.11□□□□□ -0.79
RAB40B-204ENST00000571554 ACY3Q96HD9 319 aa10.11□□□□□ -0.79
RAB40B-204ENST00000571554 CSTL1Q9H114 145 aa10.11□□□□□ -0.79
RAB40B-204ENST00000571554 KCNIP3Q9Y2W7 256 aa10.11□□□□□ -0.79
RAB40B-204ENST00000571554 EPPK1P58107 5090 aaKnown RBP10.11□□□□□ -0.79
RAB40B-204ENST00000571554 SCGB2A1O75556 95 aa10.1□□□□□ -0.79
RAB40B-204ENST00000571554 IFNA10P01566 189 aa10.1□□□□□ -0.79
RAB40B-204ENST00000571554 CRYBB3P26998 211 aa10.1□□□□□ -0.79
RAB40B-204ENST00000571554 OR10J1P30954 320 aa10.1□□□□□ -0.79
RAB40B-204ENST00000571554 CMC4P56277 68 aaPredicted RBP10.1□□□□□ -0.79
RAB40B-204ENST00000571554 KLF9Q13886 244 aaPredicted RBP10.1□□□□□ -0.79
RAB40B-204ENST00000571554 NPIPB3Q92617 1050 aa10.1□□□□□ -0.79
RAB40B-204ENST00000571554 IL22RA2Q969J5 263 aa10.1□□□□□ -0.79
RAB40B-204ENST00000571554 TRIM63Q969Q1 353 aa10.1□□□□□ -0.79
RAB40B-204ENST00000571554 RBKSQ9H477 322 aa10.1□□□□□ -0.79
RAB40B-204ENST00000571554 TMEM231Q9H6L2 316 aa10.1□□□□□ -0.79
RAB40B-204ENST00000571554 TRAV30A0A087WSZ9 112 aa10.09□□□□□ -0.79
RAB40B-204ENST00000571554 A0A1W2PS18 150 aa10.09□□□□□ -0.79
RAB40B-204ENST00000571554 CA1P00915 261 aaPredicted RBP10.09□□□□□ -0.79
RAB40B-204ENST00000571554 ZNF688P0C7X2 276 aa10.09□□□□□ -0.79
RAB40B-204ENST00000571554 SMCO1Q147U7 214 aa10.09□□□□□ -0.79
RAB40B-204ENST00000571554 NMSQ5H8A3 153 aa10.09□□□□□ -0.79
RAB40B-204ENST00000571554 TOMM5Q8N4H5 51 aa10.09□□□□□ -0.79
RAB40B-204ENST00000571554 OR1S2Q8NGQ3 325 aa10.09□□□□□ -0.79
RAB40B-204ENST00000571554 RNASEH2CQ8TDP1 164 aaKnown RBP10.09□□□□□ -0.79
RAB40B-204ENST00000571554 SCGB3A2Q96PL1 93 aa10.09□□□□□ -0.79
RAB40B-204ENST00000571554 V9GYH0 126 aa10.09□□□□□ -0.79
RAB40B-204ENST00000571554 AGRNO00468 2067 aa10.09□□□□□ -0.79
RAB40B-204ENST00000571554 A0A0B4J2A0 478 aa10.08□□□□□ -0.8
RAB40B-204ENST00000571554 KNCNA6PVL3 124 aa10.08□□□□□ -0.8
RAB40B-204ENST00000571554 K7EQG2 157 aa10.08□□□□□ -0.8
RAB40B-204ENST00000571554 DEFB4AO15263 64 aa10.08□□□□□ -0.8
RAB40B-204ENST00000571554 IL4P05112 153 aa10.08□□□□□ -0.8
RAB40B-204ENST00000571554 CD5P06127 495 aa10.08□□□□□ -0.8
RAB40B-204ENST00000571554 SLC25A4P12235 298 aa10.08□□□□□ -0.8
RAB40B-204ENST00000571554 CCR6P51684 374 aa10.08□□□□□ -0.8
RAB40B-204ENST00000571554 USF2Q15853 346 aaPredicted RBP10.08□□□□□ -0.8
RAB40B-204ENST00000571554 ZNF79Q15937 498 aa10.08□□□□□ -0.8
RAB40B-204ENST00000571554 LGI3Q8N145 548 aa10.08□□□□□ -0.8
RAB40B-204ENST00000571554 OR11H2Q8NH07 326 aa10.08□□□□□ -0.8
RAB40B-204ENST00000571554 OR1S1Q8NH92 325 aa10.08□□□□□ -0.8
RAB40B-204ENST00000571554 DTD1Q8TEA8 209 aa10.08□□□□□ -0.8
RAB40B-204ENST00000571554 Q8WTZ3 238 aa10.08□□□□□ -0.8
RAB40B-204ENST00000571554 NARS2Q96I59 477 aaKnown RBP10.08□□□□□ -0.8
RAB40B-204ENST00000571554 RARRES2Q99969 163 aa10.08□□□□□ -0.8
RAB40B-204ENST00000571554 HSPB7Q9UBY9 170 aa10.08□□□□□ -0.8
RAB40B-204ENST00000571554 SHPKQ9UHJ6 478 aa10.08□□□□□ -0.8
RAB40B-204ENST00000571554 HNRNPCP07910 306 aaKnown RBP eCLIP10.07□□□□□ -0.8
RAB40B-204ENST00000571554 IAPPP10997 89 aa10.07□□□□□ -0.8
RAB40B-204ENST00000571554 ANXA3P12429 323 aa10.07□□□□□ -0.8
RAB40B-204ENST00000571554 VAMP1P23763 118 aa10.07□□□□□ -0.8
RAB40B-204ENST00000571554 FAUP35544 74 aaKnown RBP10.07□□□□□ -0.8
RAB40B-204ENST00000571554 STHQ8IWL8 128 aa10.07□□□□□ -0.8
RAB40B-204ENST00000571554 GRAMD2BQ96HH9 432 aa10.07□□□□□ -0.8
RAB40B-204ENST00000571554 TRAV2A0A0B4J234 112 aa10.06□□□□□ -0.8
RAB40B-204ENST00000571554 NUPR2A6NF83 97 aa10.06□□□□□ -0.8
RAB40B-204ENST00000571554 LY6G6CO95867 125 aa10.06□□□□□ -0.8
RAB40B-204ENST00000571554 IFNA4P05014 189 aa10.06□□□□□ -0.8
RAB40B-204ENST00000571554 S100A5P33763 92 aa10.06□□□□□ -0.8
RAB40B-204ENST00000571554 YPEL3P61236 119 aaPredicted RBP10.06□□□□□ -0.8
RAB40B-204ENST00000571554 DHRS2Q13268 280 aa10.06□□□□□ -0.8
RAB40B-204ENST00000571554 ETFRF1Q6IPR1 90 aa10.06□□□□□ -0.8
RAB40B-204ENST00000571554 CEMP1Q6PRD7 247 aaPredicted RBP10.06□□□□□ -0.8
RAB40B-204ENST00000571554 GSG1LQ6UXU4 331 aa10.06□□□□□ -0.8
RAB40B-204ENST00000571554 OR51G1Q8NGK1 321 aa10.06□□□□□ -0.8
RAB40B-204ENST00000571554 DCANP1Q8TF63 244 aa10.06□□□□□ -0.8
RAB40B-204ENST00000571554 LINC00476Q8WZB0 136 aa10.06□□□□□ -0.8
RAB40B-204ENST00000571554 PAIP2BQ9ULR5 123 aaKnown RBP10.06□□□□□ -0.8
RAB40B-204ENST00000571554 U3KQE9 123 aa10.06□□□□□ -0.8
RAB40B-204ENST00000571554 TOMM40O96008 361 aa10.05□□□□□ -0.8
RAB40B-204ENST00000571554 RD3LP0DJH9 198 aa10.05□□□□□ -0.8
RAB40B-204ENST00000571554 PSG1P11464 419 aa10.05□□□□□ -0.8
RAB40B-204ENST00000571554 AP3S2P59780 193 aa10.05□□□□□ -0.8
RAB40B-204ENST00000571554 NANOS2P60321 138 aaKnown RBP10.05□□□□□ -0.8
RAB40B-204ENST00000571554 SRPXP78539 464 aa10.05□□□□□ -0.8
RAB40B-204ENST00000571554 ACTL10Q5JWF8 245 aa10.05□□□□□ -0.8
RAB40B-204ENST00000571554 C16orf54Q6UWD8 224 aa10.05□□□□□ -0.8
RAB40B-204ENST00000571554 NOXA1Q86UR1 476 aa10.05□□□□□ -0.8
RAB40B-204ENST00000571554 TMEM217Q8N7C4 229 aa10.05□□□□□ -0.8
RAB40B-204ENST00000571554 GATAD1Q8WUU5 269 aa10.05□□□□□ -0.8
RAB40B-204ENST00000571554 GLMPQ8WWB7 406 aa10.05□□□□□ -0.8
RAB40B-204ENST00000571554 PBDC1Q9BVG4 233 aa10.05□□□□□ -0.8
RAB40B-204ENST00000571554 RBM38Q9H0Z9 239 aaKnown RBP10.05□□□□□ -0.8
RAB40B-204ENST00000571554 FBXL17Q9UF56 701 aa10.05□□□□□ -0.8
RAB40B-204ENST00000571554 U3KQ87 197 aa10.05□□□□□ -0.8
RAB40B-204ENST00000571554 C4BPBP20851 252 aa10.04□□□□□ -0.8
RAB40B-204ENST00000571554 PPP1R1AQ13522 171 aa10.04□□□□□ -0.8
RAB40B-204ENST00000571554 TMEM128Q5BJH2 165 aa10.04□□□□□ -0.8
RAB40B-204ENST00000571554 PSMG4Q5JS54 123 aa10.04□□□□□ -0.8
RAB40B-204ENST00000571554 TRPT1Q86TN4 253 aaKnown RBP10.04□□□□□ -0.8
RAB40B-204ENST00000571554 CCDC190Q86UF4 302 aa10.04□□□□□ -0.8
RAB40B-204ENST00000571554 PHLDA1Q8WV24 401 aaPredicted RBP10.04□□□□□ -0.8
RAB40B-204ENST00000571554 MAGT1Q9H0U3 335 aa10.04□□□□□ -0.8
RAB40B-204ENST00000571554 CLEC5AQ9NY25 188 aa10.04□□□□□ -0.8
RAB40B-204ENST00000571554 LINC00854A0A1B0GVQ3 168 aa10.03□□□□□ -0.8
RAB40B-204ENST00000571554 HELTA6NFD8 242 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms