RNA–Protein interactions for RNA: ENST00000568095.5

LINC01541-202, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 1 (best) BASIC

Gene LINC01541, Length 3,105 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-202ENST00000568095 H3BRM9 83 aa4.43□□□□□ -1.7
LINC01541-202ENST00000568095 NGFP01138 241 aa4.43□□□□□ -1.7
LINC01541-202ENST00000568095 OR5AL1P0C617 328 aa4.43□□□□□ -1.7
LINC01541-202ENST00000568095 COX8AP10176 69 aa4.43□□□□□ -1.7
LINC01541-202ENST00000568095 COL8A2P25067 703 aa4.43□□□□□ -1.7
LINC01541-202ENST00000568095 TCL1AP56279 114 aa4.43□□□□□ -1.7
LINC01541-202ENST00000568095 SLC35B1P78383 322 aa4.43□□□□□ -1.7
LINC01541-202ENST00000568095 MIR17HGQ75NE6 70 aa4.43□□□□□ -1.7
LINC01541-202ENST00000568095 ERASQ7Z444 233 aa4.43□□□□□ -1.7
LINC01541-202ENST00000568095 RBMXL3Q8N7X1 1067 aaKnown RBP4.43□□□□□ -1.7
LINC01541-202ENST00000568095 OR1B1Q8NGR6 318 aa4.43□□□□□ -1.7
LINC01541-202ENST00000568095 OR2V2Q96R30 315 aa4.43□□□□□ -1.7
LINC01541-202ENST00000568095 CLCF1Q9UBD9 225 aa4.43□□□□□ -1.7
LINC01541-202ENST00000568095 FREM1Q5H8C1 2179 aa4.43□□□□□ -1.7
LINC01541-202ENST00000568095 TET2Q6N021 2002 aaPredicted RBP4.43□□□□□ -1.7
LINC01541-202ENST00000568095 hDV102S1A0JD36 115 aa4.43□□□□□ -1.7
LINC01541-202ENST00000568095 TMEM30CPA0ZSE6 113 aa4.43□□□□□ -1.7
LINC01541-202ENST00000568095 C9orf118A6NHY6 69 aa4.43□□□□□ -1.7
LINC01541-202ENST00000568095 ANKRD30BLA7E2S9 258 aa4.43□□□□□ -1.7
LINC01541-202ENST00000568095 K7EM74 188 aa4.43□□□□□ -1.7
LINC01541-202ENST00000568095 K7ENP7 123 aa4.43□□□□□ -1.7
LINC01541-202ENST00000568095 K7EP34 96 aa4.43□□□□□ -1.7
LINC01541-202ENST00000568095 PROP1O75360 226 aa4.43□□□□□ -1.7
LINC01541-202ENST00000568095 HBZP02008 142 aa4.43□□□□□ -1.7
LINC01541-202ENST00000568095 FGF6P10767 208 aa4.43□□□□□ -1.7
LINC01541-202ENST00000568095 SPINK2P20155 84 aa4.43□□□□□ -1.7
LINC01541-202ENST00000568095 RPL8P62917 257 aaKnown RBP4.43□□□□□ -1.7
LINC01541-202ENST00000568095 LINC01545Q5VT33 79 aa4.43□□□□□ -1.7
LINC01541-202ENST00000568095 FAM53AQ6NSI3 398 aaPredicted RBP4.43□□□□□ -1.7
LINC01541-202ENST00000568095 H1FXQ92522 213 aaKnown RBP4.43□□□□□ -1.7
LINC01541-202ENST00000568095 IDI2-AS1Q9NZ38 188 aa4.43□□□□□ -1.7
LINC01541-202ENST00000568095 DNAJC13O75165 2243 aa4.43□□□□□ -1.7
LINC01541-202ENST00000568095 KALRNO60229 2985 aa4.43□□□□□ -1.7
LINC01541-202ENST00000568095 PSMB11A5LHX3 300 aa4.43□□□□□ -1.7
LINC01541-202ENST00000568095 TMEM189A5PLL7 270 aa4.43□□□□□ -1.7
LINC01541-202ENST00000568095 F2RL2O00254 374 aa4.43□□□□□ -1.7
LINC01541-202ENST00000568095 OR7C2O60412 319 aa4.43□□□□□ -1.7
LINC01541-202ENST00000568095 GPR183P32249 361 aa4.43□□□□□ -1.7
LINC01541-202ENST00000568095 RIPPLY3P57055 190 aa4.43□□□□□ -1.7
LINC01541-202ENST00000568095 FOXF2Q12947 444 aa4.43□□□□□ -1.7
LINC01541-202ENST00000568095 ZNF808Q8N4W9 903 aaPredicted RBP4.43□□□□□ -1.7
LINC01541-202ENST00000568095 C5orf17Q8NAS9 161 aa4.43□□□□□ -1.7
LINC01541-202ENST00000568095 ST6GALNAC6Q969X2 333 aa4.43□□□□□ -1.7
LINC01541-202ENST00000568095 OR51B2Q9Y5P1 312 aa4.43□□□□□ -1.7
LINC01541-202ENST00000568095 RTTNQ86VV8 2226 aa4.42□□□□□ -1.7
LINC01541-202ENST00000568095 C7orf71A4D174 169 aa4.42□□□□□ -1.7
LINC01541-202ENST00000568095 FAM231BA6NCW3 169 aa4.42□□□□□ -1.7
LINC01541-202ENST00000568095 CXCL13O43927 109 aa4.42□□□□□ -1.7
LINC01541-202ENST00000568095 PSPNO60542 156 aa4.42□□□□□ -1.7
LINC01541-202ENST00000568095 CCL2P13500 99 aa4.42□□□□□ -1.7
LINC01541-202ENST00000568095 FOXE3Q13461 319 aa4.42□□□□□ -1.7
LINC01541-202ENST00000568095 DEFB109BQ30KR1 87 aa4.42□□□□□ -1.7
LINC01541-202ENST00000568095 RNASEKQ6P5S7 137 aaKnown RBP4.42□□□□□ -1.7
LINC01541-202ENST00000568095 LINC00173Q6ZV60 143 aa4.42□□□□□ -1.7
LINC01541-202ENST00000568095 GTF2H5Q6ZYL4 71 aa4.42□□□□□ -1.7
LINC01541-202ENST00000568095 TMEM178AQ8NBL3 297 aa4.42□□□□□ -1.7
LINC01541-202ENST00000568095 UBALD1Q8TB05 177 aa4.42□□□□□ -1.7
LINC01541-202ENST00000568095 SSMEM1Q8WWF3 244 aa4.42□□□□□ -1.7
LINC01541-202ENST00000568095 TRIB1Q96RU8 372 aa4.42□□□□□ -1.7
LINC01541-202ENST00000568095 JMJD8Q96S16 334 aa4.42□□□□□ -1.7
LINC01541-202ENST00000568095 CHRDL1Q9BU40 450 aa4.42□□□□□ -1.7
LINC01541-202ENST00000568095 HINT2Q9BX68 163 aa4.42□□□□□ -1.7
LINC01541-202ENST00000568095 TMEM191AQ9H0A3 160 aa4.42□□□□□ -1.7
LINC01541-202ENST00000568095 POLDIP2Q9Y2S7 368 aa4.42□□□□□ -1.7
LINC01541-202ENST00000568095 GAGE10A6NGK3 116 aa4.42□□□□□ -1.7
LINC01541-202ENST00000568095 KLRC4-KLRK1H3BQV0 150 aa4.42□□□□□ -1.7
LINC01541-202ENST00000568095 OVOL3O00110 214 aa4.42□□□□□ -1.7
LINC01541-202ENST00000568095 CA1P00915 261 aaPredicted RBP4.42□□□□□ -1.7
LINC01541-202ENST00000568095 PSG5Q15238 335 aa4.42□□□□□ -1.7
LINC01541-202ENST00000568095 Q8NA96 180 aa4.42□□□□□ -1.7
LINC01541-202ENST00000568095 OR2T6Q8NHC8 308 aa4.42□□□□□ -1.7
LINC01541-202ENST00000568095 DDB2Q92466 427 aa4.42□□□□□ -1.7
LINC01541-202ENST00000568095 SNRNP40Q96DI7 357 aaKnown RBP4.42□□□□□ -1.7
LINC01541-202ENST00000568095 COQ2Q96H96 371 aa4.42□□□□□ -1.7
LINC01541-202ENST00000568095 FAM167A-AS1Q96KT0 104 aa4.42□□□□□ -1.7
LINC01541-202ENST00000568095 NDFIP1Q9BT67 221 aa4.42□□□□□ -1.7
LINC01541-202ENST00000568095 PRSS22Q9GZN4 317 aa4.42□□□□□ -1.7
LINC01541-202ENST00000568095 NGBQ9NPG2 151 aa4.42□□□□□ -1.7
LINC01541-202ENST00000568095 B4GALT7Q9UBV7 327 aa4.42□□□□□ -1.7
LINC01541-202ENST00000568095 FOXA2Q9Y261 457 aaPredicted RBP4.42□□□□□ -1.7
LINC01541-202ENST00000568095 SOX21Q9Y651 276 aaPredicted RBP4.42□□□□□ -1.7
LINC01541-202ENST00000568095 CEP295Q9C0D2 2601 aa4.42□□□□□ -1.7
LINC01541-202ENST00000568095 ESPL1Q14674 2120 aa4.42□□□□□ -1.7
LINC01541-202ENST00000568095 PRRC2CQ9Y520 2896 aaKnown RBP4.41□□□□□ -1.7
LINC01541-202ENST00000568095 PPIAL4EA0A075B759 164 aa4.41□□□□□ -1.7
LINC01541-202ENST00000568095 A0A087X0K7 114 aa4.41□□□□□ -1.7
LINC01541-202ENST00000568095 PPIAL4CA0A0B4J2A2 164 aa4.41□□□□□ -1.7
LINC01541-202ENST00000568095 PPIAL4DF5H284 164 aa4.41□□□□□ -1.7
LINC01541-202ENST00000568095 C15orf65H3BRN8 121 aa4.41□□□□□ -1.7
LINC01541-202ENST00000568095 HAND1O96004 215 aa4.41□□□□□ -1.7
LINC01541-202ENST00000568095 PPIAL4FP0DN26 164 aa4.41□□□□□ -1.7
LINC01541-202ENST00000568095 MYCNOSP40205 109 aa4.41□□□□□ -1.7
LINC01541-202ENST00000568095 MFAP2P55001 183 aa4.41□□□□□ -1.7
LINC01541-202ENST00000568095 LINC00205P59089 165 aa4.41□□□□□ -1.7
LINC01541-202ENST00000568095 MRPL49Q13405 166 aaKnown RBP4.41□□□□□ -1.7
LINC01541-202ENST00000568095 CR1LQ2VPA4 569 aa4.41□□□□□ -1.7
LINC01541-202ENST00000568095 TMEM97Q5BJF2 176 aa4.41□□□□□ -1.7
LINC01541-202ENST00000568095 ABHD12Q8N2K0 398 aa4.41□□□□□ -1.7
LINC01541-202ENST00000568095 TMEM186Q96B77 213 aa4.41□□□□□ -1.7
LINC01541-202ENST00000568095 NABP2Q9BQ15 211 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 260.9 ms