RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, human

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-231	ENST00000564288	S100A4	P26447	101 aa	Known RBP	3.56	□□□□□ -1.84
MACF1-231	ENST00000564288	KLF12	Q9Y4X4	402 aa		3.56	□□□□□ -1.84
MACF1-231	ENST00000564288	ZDHHC16	Q969W1	377 aa		3.56	□□□□□ -1.84
MACF1-231	ENST00000564288	TNFRSF18	Q9Y5U5	241 aa		3.56	□□□□□ -1.84
MACF1-231	ENST00000564288		V9GYV3	84 aa		3.56	□□□□□ -1.84
MACF1-231	ENST00000564288	MT-CO3	P00414	261 aa		3.56	□□□□□ -1.84
MACF1-231	ENST00000564288	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	3.56	□□□□□ -1.84	1e-6	■■■□□ 14.9
MACF1-231	ENST00000564288	PTPN13	Q12923	2485 aa		3.56	□□□□□ -1.84
MACF1-231	ENST00000564288	LGALS1	P09382	135 aa	Known RBP	3.56	□□□□□ -1.84
MACF1-231	ENST00000564288	MGST3	O14880	152 aa		3.56	□□□□□ -1.84
MACF1-231	ENST00000564288	FOXA3	P55318	350 aa	Predicted RBP	3.56	□□□□□ -1.84
MACF1-231	ENST00000564288	MBNL2	Q5VZF2	373 aa	Known RBP	3.56	□□□□□ -1.84
MACF1-231	ENST00000564288	UNQ6494/PRO21346	Q6UXR6	183 aa		3.56	□□□□□ -1.84
MACF1-231	ENST00000564288	C8orf86	Q6ZUL3	223 aa		3.56	□□□□□ -1.84
MACF1-231	ENST00000564288	NDUFB8	O95169	186 aa		3.55	□□□□□ -1.84
MACF1-231	ENST00000564288	C5orf64	Q2M2E5	130 aa		3.55	□□□□□ -1.84
MACF1-231	ENST00000564288	TM2D2	Q9BX73	214 aa		3.55	□□□□□ -1.84
MACF1-231	ENST00000564288	ZGRF1	Q86YA3	2104 aa		3.55	□□□□□ -1.84
MACF1-231	ENST00000564288	TRGV8	A0A0C4DH27	118 aa		3.55	□□□□□ -1.84
MACF1-231	ENST00000564288	TRBV7-9	A0A0J9YWB2	115 aa		3.55	□□□□□ -1.84
MACF1-231	ENST00000564288	ZNF137P	P52743	207 aa		3.55	□□□□□ -1.84
MACF1-231	ENST00000564288	WFDC8	Q8IUA0	241 aa		3.55	□□□□□ -1.84
MACF1-231	ENST00000564288	SNAI2	O43623	268 aa		3.55	□□□□□ -1.84
MACF1-231	ENST00000564288	EGR1	P18146	543 aa		3.55	□□□□□ -1.84
MACF1-231	ENST00000564288	NPIPB3	Q92617	1050 aa		3.55	□□□□□ -1.84
MACF1-231	ENST00000564288	NHP2	Q9NX24	153 aa	Known RBP	3.55	□□□□□ -1.84
MACF1-231	ENST00000564288	C1QTNF5	Q9BXJ0	243 aa		3.55	□□□□□ -1.84
MACF1-231	ENST00000564288		A0A1W2PNR3	127 aa		3.55	□□□□□ -1.84
MACF1-231	ENST00000564288	NUPR1	O60356	82 aa		3.55	□□□□□ -1.84
MACF1-231	ENST00000564288	MEOX1	P50221	254 aa		3.55	□□□□□ -1.84
MACF1-231	ENST00000564288	TP53BP1	Q12888	1972 aa	Predicted RBP	3.55	□□□□□ -1.84
MACF1-231	ENST00000564288	LCNL1	Q6ZST4	164 aa		3.55	□□□□□ -1.84
MACF1-231	ENST00000564288	SMRP1	Q8NCR6	262 aa		3.55	□□□□□ -1.84
MACF1-231	ENST00000564288	RNASE7	Q9H1E1	156 aa	Known RBP	3.55	□□□□□ -1.84
MACF1-231	ENST00000564288	ZNF32	P17041	273 aa		3.55	□□□□□ -1.84
MACF1-231	ENST00000564288	SH2D7	A6NKC9	451 aa	Predicted RBP	3.55	□□□□□ -1.84
MACF1-231	ENST00000564288	ATP6V0E2	Q8NHE4	81 aa		3.55	□□□□□ -1.84
MACF1-231	ENST00000564288	FBXL7	Q9UJT9	491 aa		3.55	□□□□□ -1.84
MACF1-231	ENST00000564288	HIGD1A	Q9Y241	93 aa		3.55	□□□□□ -1.84
MACF1-231	ENST00000564288	LAGE3	Q14657	143 aa		3.55	□□□□□ -1.84
MACF1-231	ENST00000564288	SPTBN4	Q9H254	2564 aa		3.55	□□□□□ -1.84
MACF1-231	ENST00000564288	CDX4	O14627	284 aa	Predicted RBP	3.55	□□□□□ -1.84
MACF1-231	ENST00000564288	CACNG7	P62955	275 aa		3.55	□□□□□ -1.84
MACF1-231	ENST00000564288	TEX45	Q8NA69	505 aa		3.55	□□□□□ -1.84
MACF1-231	ENST00000564288	LHFPL6	Q9Y693	200 aa		3.55	□□□□□ -1.84
MACF1-231	ENST00000564288	FOXS1	O43638	330 aa		3.55	□□□□□ -1.84
MACF1-231	ENST00000564288		A0A1W2PRD5	423 aa		3.55	□□□□□ -1.84
MACF1-231	ENST00000564288		A0A1W2PRF3	423 aa		3.55	□□□□□ -1.84
MACF1-231	ENST00000564288		A0A1W2PRM7	423 aa		3.55	□□□□□ -1.84
MACF1-231	ENST00000564288	UPK2	O00526	184 aa		3.55	□□□□□ -1.84
MACF1-231	ENST00000564288	IL11	P20809	199 aa		3.55	□□□□□ -1.84
MACF1-231	ENST00000564288	ZFYVE26	Q68DK2	2539 aa		3.55	□□□□□ -1.84
MACF1-231	ENST00000564288	ORMDL2	Q53FV1	153 aa		3.55	□□□□□ -1.84
MACF1-231	ENST00000564288	MRPL14	Q6P1L8	145 aa	Known RBP	3.55	□□□□□ -1.84
MACF1-231	ENST00000564288	RRN3P1	Q2M238	152 aa		3.55	□□□□□ -1.84
MACF1-231	ENST00000564288	TIMM8A	O60220	97 aa	Predicted RBP	3.55	□□□□□ -1.84
MACF1-231	ENST00000564288	PSG4	Q00888	419 aa		3.55	□□□□□ -1.84
MACF1-231	ENST00000564288	FAM219B	Q5XKK7	198 aa		3.55	□□□□□ -1.84
MACF1-231	ENST00000564288	SYT8	Q8NBV8	401 aa		3.55	□□□□□ -1.84
MACF1-231	ENST00000564288	SLC37A2	Q8TED4	501 aa		3.55	□□□□□ -1.84
MACF1-231	ENST00000564288	PRO1854	Q9UHT4	67 aa		3.55	□□□□□ -1.84
MACF1-231	ENST00000564288	MED12L	Q86YW9	2145 aa		3.55	□□□□□ -1.84
MACF1-231	ENST00000564288	PGPEP1	Q9NXJ5	209 aa		3.55	□□□□□ -1.84
MACF1-231	ENST00000564288	TCF19	Q9Y242	345 aa		3.55	□□□□□ -1.84
MACF1-231	ENST00000564288	TRAV17	A0A0B4J275	112 aa		3.54	□□□□□ -1.84
MACF1-231	ENST00000564288	EFEMP2	O95967	443 aa		3.54	□□□□□ -1.84
MACF1-231	ENST00000564288		Q6ZRM9	215 aa		3.54	□□□□□ -1.84
MACF1-231	ENST00000564288	IFI27L2	Q9H2X8	130 aa		3.54	□□□□□ -1.84
MACF1-231	ENST00000564288	CDPF1	Q6NVV7	123 aa		3.54	□□□□□ -1.84
MACF1-231	ENST00000564288	KIR2DL4	Q99706	377 aa		3.54	□□□□□ -1.84
MACF1-231	ENST00000564288	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	3.54	□□□□□ -1.84
MACF1-231	ENST00000564288	MUC6	Q6W4X9	2439 aa		3.54	□□□□□ -1.84
MACF1-231	ENST00000564288	LMO1	P25800	156 aa		3.54	□□□□□ -1.84
MACF1-231	ENST00000564288	WIPF3	A6NGB9	483 aa		3.54	□□□□□ -1.84
MACF1-231	ENST00000564288	VCY	O14598	125 aa		3.54	□□□□□ -1.84
MACF1-231	ENST00000564288	ELN	P15502	786 aa		3.54	□□□□□ -1.84
MACF1-231	ENST00000564288	INSIG2	Q9Y5U4	225 aa		3.54	□□□□□ -1.84
MACF1-231	ENST00000564288	SORL1	Q92673	2214 aa		3.54	□□□□□ -1.84
MACF1-231	ENST00000564288	PRR32	B1ATL7	298 aa		3.54	□□□□□ -1.84
MACF1-231	ENST00000564288	LGALS3	P17931	250 aa	Known RBP	3.54	□□□□□ -1.84
MACF1-231	ENST00000564288	FOXI1	Q12951	378 aa		3.54	□□□□□ -1.84
MACF1-231	ENST00000564288	PRSS41	Q7RTY9	318 aa		3.54	□□□□□ -1.84
MACF1-231	ENST00000564288	FOXI3	A8MTJ6	420 aa	Predicted RBP	3.54	□□□□□ -1.84
MACF1-231	ENST00000564288	ZNF883	P0CG24	379 aa		3.54	□□□□□ -1.84
MACF1-231	ENST00000564288	HERV-K104	P63124	156 aa		3.54	□□□□□ -1.84
MACF1-231	ENST00000564288	SPANXN1	Q5VSR9	72 aa		3.54	□□□□□ -1.84
MACF1-231	ENST00000564288	NEU4	Q8WWR8	484 aa	Predicted RBP	3.54	□□□□□ -1.84
MACF1-231	ENST00000564288	PNRC2	Q9NPJ4	139 aa	Known RBP	3.54	□□□□□ -1.84
MACF1-231	ENST00000564288	ADAMTSL1	Q8N6G6	1762 aa		3.54	□□□□□ -1.84
MACF1-231	ENST00000564288	OOSP1	A8MZH6	123 aa		3.54	□□□□□ -1.84
MACF1-231	ENST00000564288	ZNF716	A6NP11	495 aa		3.54	□□□□□ -1.84
MACF1-231	ENST00000564288	VWC2	Q2TAL6	325 aa		3.54	□□□□□ -1.84
MACF1-231	ENST00000564288	FGF22	Q9HCT0	170 aa		3.54	□□□□□ -1.84
MACF1-231	ENST00000564288	EBLN2	Q6P2I7	272 aa		3.54	□□□□□ -1.84
MACF1-231	ENST00000564288	C2orf82	Q6UX34	121 aa		3.54	□□□□□ -1.84
MACF1-231	ENST00000564288	YRDC	Q86U90	279 aa	Known RBP	3.54	□□□□□ -1.84
MACF1-231	ENST00000564288	HILPDA	Q9Y5L2	63 aa		3.54	□□□□□ -1.84
MACF1-231	ENST00000564288	TMEM42	Q69YG0	159 aa		3.54	□□□□□ -1.84
MACF1-231	ENST00000564288	IGLV3-12	A0A075B6K2	115 aa		3.54	□□□□□ -1.84
MACF1-231	ENST00000564288	PLXNB1	O43157	2135 aa		3.54	□□□□□ -1.84

Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms