RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 SEC11BP0C7V7 166 aa9.97□□□□□ -0.81
CLK3-214ENST00000564096 IGLC1P0CG04 106 aa9.97□□□□□ -0.81
CLK3-214ENST00000564096 MDKP21741 143 aaPredicted RBP9.97□□□□□ -0.81
CLK3-214ENST00000564096 GPR183P32249 361 aa9.97□□□□□ -0.81
CLK3-214ENST00000564096 RUNX1Q01196 453 aa9.97□□□□□ -0.81
CLK3-214ENST00000564096 RELQ04864 619 aaPredicted RBP9.97□□□□□ -0.81
CLK3-214ENST00000564096 CYP2G1PQ6ZSU1 146 aa9.97□□□□□ -0.81
CLK3-214ENST00000564096 OR2G3Q8NGZ4 309 aa9.97□□□□□ -0.81
CLK3-214ENST00000564096 MYOZ3Q8TDC0 251 aa9.97□□□□□ -0.81
CLK3-214ENST00000564096 CCDC140Q96MF4 163 aa9.97□□□□□ -0.81
CLK3-214ENST00000564096 MGST2Q99735 147 aa9.97□□□□□ -0.81
CLK3-214ENST00000564096 RSG1Q9BU20 258 aa9.97□□□□□ -0.81
CLK3-214ENST00000564096 GGTLC1Q9BX51 225 aa9.97□□□□□ -0.81
CLK3-214ENST00000564096 SLC25A32Q9H2D1 315 aa9.97□□□□□ -0.81
CLK3-214ENST00000564096 MXRA5Q9NR99 2828 aa9.97□□□□□ -0.81
CLK3-214ENST00000564096 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.96□□□□□ -0.82
CLK3-214ENST00000564096 OR2T8A6NH00 312 aa9.96□□□□□ -0.82
CLK3-214ENST00000564096 UMAD1C9J7I0 102 aa9.96□□□□□ -0.82
CLK3-214ENST00000564096 TGOLN2O43493 480 aa9.96□□□□□ -0.82
CLK3-214ENST00000564096 TSPAN15O95858 294 aa9.96□□□□□ -0.82
CLK3-214ENST00000564096 CFDP00746 253 aaPredicted RBP9.96□□□□□ -0.82
CLK3-214ENST00000564096 IGHV3-23P01764 117 aa9.96□□□□□ -0.82
CLK3-214ENST00000564096 MBP02144 154 aa9.96□□□□□ -0.82
CLK3-214ENST00000564096 RPLP1P05386 114 aaKnown RBP9.96□□□□□ -0.82
CLK3-214ENST00000564096 SPP1P10451 314 aa9.96□□□□□ -0.82
CLK3-214ENST00000564096 RPL29P47914 159 aaKnown RBP9.96□□□□□ -0.82
CLK3-214ENST00000564096 B2MP61769 119 aa9.96□□□□□ -0.82
CLK3-214ENST00000564096 SERF2P84101 59 aa9.96□□□□□ -0.82
CLK3-214ENST00000564096 FOXL1Q12952 345 aa9.96□□□□□ -0.82
CLK3-214ENST00000564096 MLANAQ16655 118 aa9.96□□□□□ -0.82
CLK3-214ENST00000564096 AKR1C8PQ5T2L2 129 aa9.96□□□□□ -0.82
CLK3-214ENST00000564096 STPG3Q8N7X2 389 aa9.96□□□□□ -0.82
CLK3-214ENST00000564096 BPIFCQ8NFQ6 507 aa9.96□□□□□ -0.82
CLK3-214ENST00000564096 TMED6Q8WW62 240 aa9.96□□□□□ -0.82
CLK3-214ENST00000564096 UBE2E2Q96LR5 201 aa9.96□□□□□ -0.82
CLK3-214ENST00000564096 KLK15Q9H2R5 256 aa9.96□□□□□ -0.82
CLK3-214ENST00000564096 GNB4Q9HAV0 340 aa9.96□□□□□ -0.82
CLK3-214ENST00000564096 MRPL36Q9P0J6 103 aaKnown RBP9.96□□□□□ -0.82
CLK3-214ENST00000564096 PXMP4Q9Y6I8 212 aa9.96□□□□□ -0.82
CLK3-214ENST00000564096 S4R3C0 116 aa9.96□□□□□ -0.82
CLK3-214ENST00000564096 IGHV3-11P01762 117 aa9.95□□□□□ -0.82
CLK3-214ENST00000564096 LGALS1P09382 135 aaKnown RBP9.95□□□□□ -0.82
CLK3-214ENST00000564096 ARL3P36405 182 aa9.95□□□□□ -0.82
CLK3-214ENST00000564096 RAB5CP51148 216 aa9.95□□□□□ -0.82
CLK3-214ENST00000564096 ELLP55199 621 aaPredicted RBP9.95□□□□□ -0.82
CLK3-214ENST00000564096 YPEL3P61236 119 aaPredicted RBP9.95□□□□□ -0.82
CLK3-214ENST00000564096 ZNF616Q08AN1 781 aa9.95□□□□□ -0.82
CLK3-214ENST00000564096 PXDC1Q5TGL8 231 aa9.95□□□□□ -0.82
CLK3-214ENST00000564096 ZNF343Q6P1L6 599 aa9.95□□□□□ -0.82
CLK3-214ENST00000564096 TEX261Q6UWH6 196 aa9.95□□□□□ -0.82
CLK3-214ENST00000564096 C10orf99Q6UWK7 81 aa9.95□□□□□ -0.82
CLK3-214ENST00000564096 CLEC19AQ6UXS0 136 aa9.95□□□□□ -0.82
CLK3-214ENST00000564096 Q6ZRG5 221 aa9.95□□□□□ -0.82
CLK3-214ENST00000564096 LCNL1Q6ZST4 164 aa9.95□□□□□ -0.82
CLK3-214ENST00000564096 ZNF767PQ75MW2 155 aa9.95□□□□□ -0.82
CLK3-214ENST00000564096 S100A7AQ86SG5 101 aa9.95□□□□□ -0.82
CLK3-214ENST00000564096 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.95□□□□□ -0.82
CLK3-214ENST00000564096 WFDC12Q8WWY7 111 aa9.95□□□□□ -0.82
CLK3-214ENST00000564096 SH3BGRL3Q9H299 93 aa9.95□□□□□ -0.82
CLK3-214ENST00000564096 UBQLN2Q9UHD9 624 aa9.95□□□□□ -0.82
CLK3-214ENST00000564096 IGKV1D-37A0A075B6S9 117 aa9.94□□□□□ -0.82
CLK3-214ENST00000564096 IGKV1OR2-108A0A075B7D4 117 aa9.94□□□□□ -0.82
CLK3-214ENST00000564096 F8W735 103 aaPredicted RBP9.94□□□□□ -0.82
CLK3-214ENST00000564096 TOMM40O96008 361 aa9.94□□□□□ -0.82
CLK3-214ENST00000564096 CLEC3BP05452 202 aa9.94□□□□□ -0.82
CLK3-214ENST00000564096 LINC00869P0C866 280 aa9.94□□□□□ -0.82
CLK3-214ENST00000564096 S100A7P31151 101 aa9.94□□□□□ -0.82
CLK3-214ENST00000564096 PROK1P58294 105 aa9.94□□□□□ -0.82
CLK3-214ENST00000564096 ACOT6Q3I5F7 207 aaPredicted RBP9.94□□□□□ -0.82
CLK3-214ENST00000564096 TIGITQ495A1 244 aa9.94□□□□□ -0.82
CLK3-214ENST00000564096 FFAR4Q5NUL3 377 aa9.94□□□□□ -0.82
CLK3-214ENST00000564096 ALKAL2Q6UX46 152 aa9.94□□□□□ -0.82
CLK3-214ENST00000564096 ZNF600Q6ZNG1 722 aa9.94□□□□□ -0.82
CLK3-214ENST00000564096 TMEM182Q6ZP80 229 aaPredicted RBP9.94□□□□□ -0.82
CLK3-214ENST00000564096 ZNF491Q8N8L2 437 aa9.94□□□□□ -0.82
CLK3-214ENST00000564096 WIPF2Q8TF74 440 aaPredicted RBP9.94□□□□□ -0.82
CLK3-214ENST00000564096 C4orf3Q8WVX3 66 aa9.94□□□□□ -0.82
CLK3-214ENST00000564096 PFDN5Q99471 154 aa9.94□□□□□ -0.82
CLK3-214ENST00000564096 SLC39A9Q9NUM3 307 aa9.94□□□□□ -0.82
CLK3-214ENST00000564096 NUDT19A8MXV4 375 aa9.93□□□□□ -0.82
CLK3-214ENST00000564096 IGKV1-17P01599 117 aa9.93□□□□□ -0.82
CLK3-214ENST00000564096 RD3LP0DJH9 198 aa9.93□□□□□ -0.82
CLK3-214ENST00000564096 CDX1P47902 265 aaPredicted RBP9.93□□□□□ -0.82
CLK3-214ENST00000564096 PRR20EP86478 221 aa9.93□□□□□ -0.82
CLK3-214ENST00000564096 PRR20CP86479 221 aa9.93□□□□□ -0.82
CLK3-214ENST00000564096 PRR20DP86480 221 aa9.93□□□□□ -0.82
CLK3-214ENST00000564096 PRR20BP86481 221 aa9.93□□□□□ -0.82
CLK3-214ENST00000564096 PRR20AP86496 221 aa9.93□□□□□ -0.82
CLK3-214ENST00000564096 SRSF2Q01130 221 aaKnown RBP9.93□□□□□ -0.82
CLK3-214ENST00000564096 TMEM41BQ5BJD5 291 aa9.93□□□□□ -0.82
CLK3-214ENST00000564096 MIC13Q5XKP0 118 aa9.93□□□□□ -0.82
CLK3-214ENST00000564096 DPPA3Q6W0C5 159 aa9.93□□□□□ -0.82
CLK3-214ENST00000564096 OR51G1Q8NGK1 321 aa9.93□□□□□ -0.82
CLK3-214ENST00000564096 OR1L4Q8NGR5 311 aa9.93□□□□□ -0.82
CLK3-214ENST00000564096 LRRC20Q8TCA0 184 aa9.93□□□□□ -0.82
CLK3-214ENST00000564096 Q8WTZ3 238 aa9.93□□□□□ -0.82
CLK3-214ENST00000564096 RNF141Q8WVD5 230 aa9.93□□□□□ -0.82
CLK3-214ENST00000564096 PEF1Q9UBV8 284 aaKnown RBP9.93□□□□□ -0.82
CLK3-214ENST00000564096 SLC45A2Q9UMX9 530 aa9.93□□□□□ -0.82
CLK3-214ENST00000564096 TSSC4Q9Y5U2 329 aaPredicted RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms