RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 CRYBA1P05813 215 aa7.9□□□□□ -1.14
SMG1-208ENST00000563448 LINC00869P0C866 280 aa7.9□□□□□ -1.14
SMG1-208ENST00000563448 IGLC1P0CG04 106 aa7.9□□□□□ -1.14
SMG1-208ENST00000563448 GATA2P23769 480 aaPredicted RBP7.9□□□□□ -1.14
SMG1-208ENST00000563448 RPL29P47914 159 aaKnown RBP7.9□□□□□ -1.14
SMG1-208ENST00000563448 TPPP2P59282 170 aa7.9□□□□□ -1.14
SMG1-208ENST00000563448 SERF2P84101 59 aa7.9□□□□□ -1.14
SMG1-208ENST00000563448 ZNF90Q03938 601 aa7.9□□□□□ -1.14
SMG1-208ENST00000563448 RAB31Q13636 194 aa7.9□□□□□ -1.14
SMG1-208ENST00000563448 LCNL1Q6ZST4 164 aa7.9□□□□□ -1.14
SMG1-208ENST00000563448 CYP2G1PQ6ZSU1 146 aa7.9□□□□□ -1.14
SMG1-208ENST00000563448 FAM223AQ8IWN6 122 aa7.9□□□□□ -1.14
SMG1-208ENST00000563448 ZNF709Q8N972 641 aa7.9□□□□□ -1.14
SMG1-208ENST00000563448 ZNF502Q8TBZ5 544 aa7.9□□□□□ -1.14
SMG1-208ENST00000563448 TRGV9Q99603 122 aa7.9□□□□□ -1.14
SMG1-208ENST00000563448 PXMP4Q9Y6I8 212 aa7.9□□□□□ -1.14
SMG1-208ENST00000563448 PSMB11A5LHX3 300 aa7.9□□□□□ -1.15
SMG1-208ENST00000563448 YIF1AO95070 293 aa7.9□□□□□ -1.15
SMG1-208ENST00000563448 PSMB8P28062 276 aa7.9□□□□□ -1.15
SMG1-208ENST00000563448 FCGR2BP31994 310 aaPredicted RBP7.9□□□□□ -1.15
SMG1-208ENST00000563448 RAB9AP51151 201 aa7.9□□□□□ -1.15
SMG1-208ENST00000563448 ELLP55199 621 aaPredicted RBP7.9□□□□□ -1.15
SMG1-208ENST00000563448 PRR20EP86478 221 aa7.9□□□□□ -1.15
SMG1-208ENST00000563448 PRR20CP86479 221 aa7.9□□□□□ -1.15
SMG1-208ENST00000563448 PRR20DP86480 221 aa7.9□□□□□ -1.15
SMG1-208ENST00000563448 PRR20BP86481 221 aa7.9□□□□□ -1.15
SMG1-208ENST00000563448 PRR20AP86496 221 aa7.9□□□□□ -1.15
SMG1-208ENST00000563448 ATP5G2Q06055 141 aa7.9□□□□□ -1.15
SMG1-208ENST00000563448 TIGITQ495A1 244 aa7.9□□□□□ -1.15
SMG1-208ENST00000563448 FFAR4Q5NUL3 377 aa7.9□□□□□ -1.15
SMG1-208ENST00000563448 STPG3Q8N7X2 389 aa7.9□□□□□ -1.15
SMG1-208ENST00000563448 BPIFCQ8NFQ6 507 aa7.9□□□□□ -1.15
SMG1-208ENST00000563448 RNF141Q8WVD5 230 aa7.9□□□□□ -1.15
SMG1-208ENST00000563448 CXorf58Q96LI9 332 aa7.9□□□□□ -1.15
SMG1-208ENST00000563448 TMEM89A2RUT3 159 aa7.89□□□□□ -1.15
SMG1-208ENST00000563448 LINC00862A6NCI5 91 aa7.89□□□□□ -1.15
SMG1-208ENST00000563448 GNG7O60262 68 aa7.89□□□□□ -1.15
SMG1-208ENST00000563448 NMBP08949 121 aa7.89□□□□□ -1.15
SMG1-208ENST00000563448 NPBWR1P48145 328 aa7.89□□□□□ -1.15
SMG1-208ENST00000563448 FHITP49789 147 aa7.89□□□□□ -1.15
SMG1-208ENST00000563448 RAB2AP61019 212 aa7.89□□□□□ -1.15
SMG1-208ENST00000563448 B2MP61769 119 aa7.89□□□□□ -1.15
SMG1-208ENST00000563448 SLC35B1P78383 322 aa7.89□□□□□ -1.15
SMG1-208ENST00000563448 SRSF2Q01130 221 aaKnown RBP7.89□□□□□ -1.15
SMG1-208ENST00000563448 Q56UQ5 140 aa7.89□□□□□ -1.15
SMG1-208ENST00000563448 EEF1AKMT3Q96AZ1 226 aa7.89□□□□□ -1.15
SMG1-208ENST00000563448 CCDC140Q96MF4 163 aa7.89□□□□□ -1.15
SMG1-208ENST00000563448 TXN2Q99757 166 aa7.89□□□□□ -1.15
SMG1-208ENST00000563448 C16orf95Q9H693 158 aa7.89□□□□□ -1.15
SMG1-208ENST00000563448 SLC39A9Q9NUM3 307 aa7.89□□□□□ -1.15
SMG1-208ENST00000563448 TRAV30A0A087WSZ9 112 aa7.88□□□□□ -1.15
SMG1-208ENST00000563448 UMAD1C9J7I0 102 aa7.88□□□□□ -1.15
SMG1-208ENST00000563448 TSPAN15O95858 294 aa7.88□□□□□ -1.15
SMG1-208ENST00000563448 IGKV1-17P01599 117 aa7.88□□□□□ -1.15
SMG1-208ENST00000563448 KIAA0141Q14154 515 aaPredicted RBP7.88□□□□□ -1.15
SMG1-208ENST00000563448 TMEM41BQ5BJD5 291 aa7.88□□□□□ -1.15
SMG1-208ENST00000563448 GCSAMLQ5JQS6 135 aa7.88□□□□□ -1.15
SMG1-208ENST00000563448 CLLU1Q5K131 121 aa7.88□□□□□ -1.15
SMG1-208ENST00000563448 AKR1C8PQ5T2L2 129 aa7.88□□□□□ -1.15
SMG1-208ENST00000563448 TEX38Q6PEX7 206 aa7.88□□□□□ -1.15
SMG1-208ENST00000563448 USMG5Q96IX5 58 aa7.88□□□□□ -1.15
SMG1-208ENST00000563448 RPRMQ9NS64 109 aa7.88□□□□□ -1.15
SMG1-208ENST00000563448 TRBV7-1A0A0A6YYK4 115 aa7.88□□□□□ -1.15
SMG1-208ENST00000563448 OR2T8A6NH00 312 aa7.88□□□□□ -1.15
SMG1-208ENST00000563448 ZNF705EA8MWA4 302 aaPredicted RBP7.88□□□□□ -1.15
SMG1-208ENST00000563448 CTSGP08311 255 aa7.88□□□□□ -1.15
SMG1-208ENST00000563448 RAB5CP51148 216 aa7.88□□□□□ -1.15
SMG1-208ENST00000563448 FOXE3Q13461 319 aa7.88□□□□□ -1.15
SMG1-208ENST00000563448 CLEC19AQ6UXS0 136 aa7.88□□□□□ -1.15
SMG1-208ENST00000563448 LRRC20Q8TCA0 184 aa7.88□□□□□ -1.15
SMG1-208ENST00000563448 ZNF414Q96IQ9 312 aa7.88□□□□□ -1.15
SMG1-208ENST00000563448 CITED4Q96RK1 184 aa7.88□□□□□ -1.15
SMG1-208ENST00000563448 KCNIP2Q9NS61 270 aa7.88□□□□□ -1.15
SMG1-208ENST00000563448 NDUFA7O95182 113 aa7.87□□□□□ -1.15
SMG1-208ENST00000563448 IGHV3-11P01762 117 aa7.87□□□□□ -1.15
SMG1-208ENST00000563448 RPLP1P05386 114 aaKnown RBP7.87□□□□□ -1.15
SMG1-208ENST00000563448 CLEC3BP05452 202 aa7.87□□□□□ -1.15
SMG1-208ENST00000563448 ELANEP08246 267 aa7.87□□□□□ -1.15
SMG1-208ENST00000563448 PSG1P11464 419 aa7.87□□□□□ -1.15
SMG1-208ENST00000563448 GPR183P32249 361 aa7.87□□□□□ -1.15
SMG1-208ENST00000563448 ADMP35318 185 aa7.87□□□□□ -1.15
SMG1-208ENST00000563448 SELENOTP62341 195 aa7.87□□□□□ -1.15
SMG1-208ENST00000563448 ACOT6Q3I5F7 207 aaPredicted RBP7.87□□□□□ -1.15
SMG1-208ENST00000563448 Q6ZRG5 221 aa7.87□□□□□ -1.15
SMG1-208ENST00000563448 SSX7Q7RTT5 188 aa7.87□□□□□ -1.15
SMG1-208ENST00000563448 KLHDC1Q8N7A1 406 aa7.87□□□□□ -1.15
SMG1-208ENST00000563448 RNF152Q8N8N0 203 aa7.87□□□□□ -1.15
SMG1-208ENST00000563448 OR10G4Q8NGN3 311 aa7.87□□□□□ -1.15
SMG1-208ENST00000563448 OR10G9Q8NGN4 311 aa7.87□□□□□ -1.15
SMG1-208ENST00000563448 OR10G7Q8NGN6 311 aa7.87□□□□□ -1.15
SMG1-208ENST00000563448 LINC01006Q8NI28 216 aa7.87□□□□□ -1.15
SMG1-208ENST00000563448 FAM213BQ8TBF2 198 aa7.87□□□□□ -1.15
SMG1-208ENST00000563448 CHRDL1Q9BU40 450 aa7.87□□□□□ -1.15
SMG1-208ENST00000563448 TOMM40O96008 361 aa7.86□□□□□ -1.15
SMG1-208ENST00000563448 MBP02144 154 aa7.86□□□□□ -1.15
SMG1-208ENST00000563448 RAB14P61106 215 aa7.86□□□□□ -1.15
SMG1-208ENST00000563448 YPEL3P61236 119 aaPredicted RBP7.86□□□□□ -1.15
SMG1-208ENST00000563448 ZNF616Q08AN1 781 aa7.86□□□□□ -1.15
SMG1-208ENST00000563448 ZNF726P1Q15940 193 aa7.86□□□□□ -1.15
SMG1-208ENST00000563448 DPPA3Q6W0C5 159 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms