RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 FAM162BQ5T6X4 162 aa13.37□□□□□ -0.27
TPM1-228ENST00000560975 C10orf113Q5VZT2 155 aa13.37□□□□□ -0.27
TPM1-228ENST00000560975 SMIM12Q96EX1 92 aa13.37□□□□□ -0.27
TPM1-228ENST00000560975 C7orf69Q9H7B7 122 aa13.37□□□□□ -0.27
TPM1-228ENST00000560975 TEX45Q8NA69 505 aa13.37□□□□□ -0.27
TPM1-228ENST00000560975 TMUB1Q9BVT8 246 aa13.37□□□□□ -0.27
TPM1-228ENST00000560975 C1RLQ9NZP8 487 aa13.37□□□□□ -0.27
TPM1-228ENST00000560975 ABI3Q9P2A4 366 aa13.37□□□□□ -0.27
TPM1-228ENST00000560975 CADP27708 2225 aa13.36□□□□□ -0.27
TPM1-228ENST00000560975 PSMB11A5LHX3 300 aa13.36□□□□□ -0.27
TPM1-228ENST00000560975 F2RL2O00254 374 aa13.36□□□□□ -0.27
TPM1-228ENST00000560975 UPK2O00526 184 aa13.36□□□□□ -0.27
TPM1-228ENST00000560975 HTR1DP28221 377 aa13.36□□□□□ -0.27
TPM1-228ENST00000560975 FER1L6-AS1Q8NA97 138 aa13.36□□□□□ -0.27
TPM1-228ENST00000560975 OR1B1Q8NGR6 318 aa13.36□□□□□ -0.27
TPM1-228ENST00000560975 RND1Q92730 232 aa13.36□□□□□ -0.27
TPM1-228ENST00000560975 RPP21Q9H633 154 aaKnown RBP13.36□□□□□ -0.27
TPM1-228ENST00000560975 NAV3Q8IVL0 2385 aa13.36□□□□□ -0.27
TPM1-228ENST00000560975 CHEK1O14757 476 aa13.36□□□□□ -0.27
TPM1-228ENST00000560975 MOSP00540 346 aa13.36□□□□□ -0.27
TPM1-228ENST00000560975 HLA-DRB1P01911 266 aa13.36□□□□□ -0.27
TPM1-228ENST00000560975 LIPFP07098 398 aa13.36□□□□□ -0.27
TPM1-228ENST00000560975 TMEM177Q53S58 311 aa13.36□□□□□ -0.27
TPM1-228ENST00000560975 PATE2Q6UY27 113 aa13.36□□□□□ -0.27
TPM1-228ENST00000560975 BPIFA4PQ86YQ2 179 aa13.36□□□□□ -0.27
TPM1-228ENST00000560975 PGPA6NDG6 321 aa13.35□□□□□ -0.27
TPM1-228ENST00000560975 SPRNQ5BIV9 151 aa13.35□□□□□ -0.27
TPM1-228ENST00000560975 C2orf91Q6ZV80 131 aa13.35□□□□□ -0.27
TPM1-228ENST00000560975 REG1BP48304 166 aa13.35□□□□□ -0.27
TPM1-228ENST00000560975 C2orf83Q53S99 150 aa13.35□□□□□ -0.27
TPM1-228ENST00000560975 PET117Q6UWS5 81 aa13.35□□□□□ -0.27
TPM1-228ENST00000560975 H1FXQ92522 213 aaKnown RBP13.35□□□□□ -0.27
TPM1-228ENST00000560975 AP1S3Q96PC3 154 aa13.35□□□□□ -0.27
TPM1-228ENST00000560975 ZNF576Q9H609 170 aa13.35□□□□□ -0.27
TPM1-228ENST00000560975 SPRR3Q9UBC9 169 aa13.35□□□□□ -0.27
TPM1-228ENST00000560975 WDFY4Q6ZS81 3184 aa13.35□□□□□ -0.27
TPM1-228ENST00000560975 P01737 135 aa13.34□□□□□ -0.27
TPM1-228ENST00000560975 C17orf58Q2M2W7 97 aa13.34□□□□□ -0.27
TPM1-228ENST00000560975 DUX4L9Q6RFH8 374 aaPredicted RBP13.34□□□□□ -0.27
TPM1-228ENST00000560975 TMEM105Q8N8V8 129 aa13.34□□□□□ -0.27
TPM1-228ENST00000560975 NPIPB3Q92617 1050 aa13.34□□□□□ -0.27
TPM1-228ENST00000560975 FXYD5Q96DB9 178 aa13.34□□□□□ -0.27
TPM1-228ENST00000560975 EPDR1Q9UM22 224 aa13.34□□□□□ -0.27
TPM1-228ENST00000560975 HILPDAQ9Y5L2 63 aa13.34□□□□□ -0.27
TPM1-228ENST00000560975 TMEM11P17152 192 aa13.34□□□□□ -0.27
TPM1-228ENST00000560975 CNEP1R1Q8N9A8 125 aa13.34□□□□□ -0.27
TPM1-228ENST00000560975 PPP1R35Q8TAP8 253 aa13.34□□□□□ -0.27
TPM1-228ENST00000560975 TMEM265A0A087WTH1 108 aa13.34□□□□□ -0.27
TPM1-228ENST00000560975 A8MWL6 223 aa13.34□□□□□ -0.27
TPM1-228ENST00000560975 KLK10O43240 276 aa13.34□□□□□ -0.27
TPM1-228ENST00000560975 OR5AL1P0C617 328 aa13.34□□□□□ -0.27
TPM1-228ENST00000560975 TMEM97Q5BJF2 176 aa13.34□□□□□ -0.27
TPM1-228ENST00000560975 PDPNQ86YL7 162 aa13.34□□□□□ -0.27
TPM1-228ENST00000560975 PILRBQ9UKJ0 227 aa13.34□□□□□ -0.27
TPM1-228ENST00000560975 H3BUT2 72 aa13.33□□□□□ -0.28
TPM1-228ENST00000560975 NCR2O95944 276 aa13.33□□□□□ -0.28
TPM1-228ENST00000560975 SAA1P0DJI8 122 aaPredicted RBP13.33□□□□□ -0.28
TPM1-228ENST00000560975 PRB4P10163 310 aaPredicted RBP13.33□□□□□ -0.28
TPM1-228ENST00000560975 ORM2P19652 201 aa13.33□□□□□ -0.28
TPM1-228ENST00000560975 LINC00305Q7Z4B0 112 aa13.33□□□□□ -0.28
TPM1-228ENST00000560975 TMEM116Q8NCL8 245 aa13.33□□□□□ -0.28
TPM1-228ENST00000560975 JMJD8Q96S16 334 aa13.33□□□□□ -0.28
TPM1-228ENST00000560975 MS4A6AQ9H2W1 248 aa13.33□□□□□ -0.28
TPM1-228ENST00000560975 ZFHX4Q86UP3 3567 aa13.33□□□□□ -0.28
TPM1-228ENST00000560975 COX8AP10176 69 aa13.33□□□□□ -0.28
TPM1-228ENST00000560975 CLEC2AQ6UVW9 174 aa13.33□□□□□ -0.28
TPM1-228ENST00000560975 GCSAMQ8N6F7 178 aa13.33□□□□□ -0.28
TPM1-228ENST00000560975 RBMXL3Q8N7X1 1067 aaKnown RBP13.33□□□□□ -0.28
TPM1-228ENST00000560975 GPR82Q96P67 336 aa13.33□□□□□ -0.28
TPM1-228ENST00000560975 ZNF257Q9Y2Q1 563 aa13.33□□□□□ -0.28
TPM1-228ENST00000560975 E7EUB6 86 aa13.32□□□□□ -0.28
TPM1-228ENST00000560975 HOXC12P31275 282 aa13.32□□□□□ -0.28
TPM1-228ENST00000560975 INO80CQ6PI98 192 aaPredicted RBP13.32□□□□□ -0.28
TPM1-228ENST00000560975 RAB37Q96AX2 223 aa13.32□□□□□ -0.28
TPM1-228ENST00000560975 DAZAP1Q96EP5 407 aaKnown RBP13.32□□□□□ -0.28
TPM1-228ENST00000560975 HSPB8Q9UJY1 196 aa13.32□□□□□ -0.28
TPM1-228ENST00000560975 ABCA1O95477 2261 aa13.32□□□□□ -0.28
TPM1-228ENST00000560975 SRRM5B3KS81 715 aa13.32□□□□□ -0.28
TPM1-228ENST00000560975 PLXNB1O43157 2135 aa13.32□□□□□ -0.28
TPM1-228ENST00000560975 CECR9P0C854 216 aa13.32□□□□□ -0.28
TPM1-228ENST00000560975 RNFT1Q5M7Z0 435 aa13.32□□□□□ -0.28
TPM1-228ENST00000560975 MOGAT3Q86VF5 341 aa13.32□□□□□ -0.28
TPM1-228ENST00000560975 ZNF714Q96N38 554 aa13.32□□□□□ -0.28
TPM1-228ENST00000560975 SP9P0CG40 484 aa13.31□□□□□ -0.28
TPM1-228ENST00000560975 CT45A6P0DMU7 189 aa13.31□□□□□ -0.28
TPM1-228ENST00000560975 CT45A5P0DMU8 189 aa13.31□□□□□ -0.28
TPM1-228ENST00000560975 CT45A7P0DMV0 189 aa13.31□□□□□ -0.28
TPM1-228ENST00000560975 VWA1Q6PCB0 445 aa13.31□□□□□ -0.28
TPM1-228ENST00000560975 BHLHA15Q7RTS1 189 aaPredicted RBP13.31□□□□□ -0.28
TPM1-228ENST00000560975 OR1L8Q8NGR8 309 aa13.31□□□□□ -0.28
TPM1-228ENST00000560975 ZNF430Q9H8G1 570 aaPredicted RBP13.31□□□□□ -0.28
TPM1-228ENST00000560975 TRGV5A0A0B4J1U4 118 aa13.31□□□□□ -0.28
TPM1-228ENST00000560975 RBPMS2Q6ZRY4 209 aaKnown RBP13.31□□□□□ -0.28
TPM1-228ENST00000560975 DEFB108BQ8NET1 73 aa13.31□□□□□ -0.28
TPM1-228ENST00000560975 OR1L4Q8NGR5 311 aa13.31□□□□□ -0.28
TPM1-228ENST00000560975 MRPL36Q9P0J6 103 aaKnown RBP13.31□□□□□ -0.28
TPM1-228ENST00000560975 DLL1O00548 723 aa13.3□□□□□ -0.28
TPM1-228ENST00000560975 C10orf55Q5SWW7 151 aa13.3□□□□□ -0.28
TPM1-228ENST00000560975 Q71RC1 249 aaPredicted RBP13.3□□□□□ -0.28
TPM1-228ENST00000560975 ITLN1Q8WWA0 313 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms