RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 IGKV1D-37A0A075B6S9 117 aa10.87□□□□□ -0.67
TPM1-215ENST00000558868 FSHBP01225 129 aa10.87□□□□□ -0.67
TPM1-215ENST00000558868 STAG3L2P0CL84 134 aa10.87□□□□□ -0.67
TPM1-215ENST00000558868 STAG3L3P0CL85 134 aa10.87□□□□□ -0.67
TPM1-215ENST00000558868 NPBWR1P48145 328 aa10.87□□□□□ -0.67
TPM1-215ENST00000558868 DEFA5Q01523 94 aa10.87□□□□□ -0.67
TPM1-215ENST00000558868 ICAM4Q14773 271 aa10.87□□□□□ -0.67
TPM1-215ENST00000558868 KLK9Q2XQG4 91 aa10.87□□□□□ -0.67
TPM1-215ENST00000558868 AKIRIN2Q53H80 203 aa10.87□□□□□ -0.67
TPM1-215ENST00000558868 GCSAMLQ5JQS6 135 aa10.87□□□□□ -0.67
TPM1-215ENST00000558868 UNQ5815/PRO19632Q6UWF5 114 aa10.87□□□□□ -0.67
TPM1-215ENST00000558868 C19orf35Q6ZS72 473 aa10.87□□□□□ -0.67
TPM1-215ENST00000558868 TMEM219Q86XT9 240 aa10.87□□□□□ -0.67
TPM1-215ENST00000558868 IQCF2Q8IXL9 164 aa10.87□□□□□ -0.67
TPM1-215ENST00000558868 OR5R1Q8NH85 324 aa10.87□□□□□ -0.67
TPM1-215ENST00000558868 ZNF48Q96MX3 618 aaPredicted RBP10.87□□□□□ -0.67
TPM1-215ENST00000558868 RARRES2Q99969 163 aa10.87□□□□□ -0.67
TPM1-215ENST00000558868 HSPB9Q9BQS6 159 aa10.87□□□□□ -0.67
TPM1-215ENST00000558868 TMUB1Q9BVT8 246 aa10.87□□□□□ -0.67
TPM1-215ENST00000558868 DNAJC4Q9NNZ3 241 aa10.87□□□□□ -0.67
TPM1-215ENST00000558868 TECRQ9NZ01 308 aaKnown RBP10.87□□□□□ -0.67
TPM1-215ENST00000558868 KLK9Q9UKQ9 250 aa10.87□□□□□ -0.67
TPM1-215ENST00000558868 FUT9Q9Y231 359 aa10.87□□□□□ -0.67
TPM1-215ENST00000558868 DMRT1Q9Y5R6 373 aa10.87□□□□□ -0.67
TPM1-215ENST00000558868 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.87□□□□□ -0.675e-6■■■□□ 16.3
TPM1-215ENST00000558868 ELOA3CA0A087WX78 387 aaPredicted RBP10.86□□□□□ -0.67
TPM1-215ENST00000558868 K7EIM0 57 aa10.86□□□□□ -0.67
TPM1-215ENST00000558868 ATP6V0E1O15342 81 aa10.86□□□□□ -0.67
TPM1-215ENST00000558868 COX7A2P2O60397 106 aa10.86□□□□□ -0.67
TPM1-215ENST00000558868 CLN5O75503 358 aa10.86□□□□□ -0.67
TPM1-215ENST00000558868 IGHV3-48P01763 117 aa10.86□□□□□ -0.67
TPM1-215ENST00000558868 OR5G3P0C626 314 aa10.86□□□□□ -0.67
TPM1-215ENST00000558868 CRIP2P52943 208 aaPredicted RBP10.86□□□□□ -0.67
TPM1-215ENST00000558868 MFAP4P55083 255 aa10.86□□□□□ -0.67
TPM1-215ENST00000558868 FAM78BQ5VT40 261 aa10.86□□□□□ -0.67
TPM1-215ENST00000558868 RXFP4Q8TDU9 374 aa10.86□□□□□ -0.67
TPM1-215ENST00000558868 FANCD2OSQ96PS1 177 aa10.86□□□□□ -0.67
TPM1-215ENST00000558868 TXNDC17Q9BRA2 123 aa10.86□□□□□ -0.67
TPM1-215ENST00000558868 MRPL36Q9P0J6 103 aaKnown RBP10.86□□□□□ -0.67
TPM1-215ENST00000558868 TACC2O95359 2948 aa10.86□□□□□ -0.67
TPM1-215ENST00000558868 MTORP42345 2549 aa10.85□□□□□ -0.67
TPM1-215ENST00000558868 C9JQL5 133 aa10.85□□□□□ -0.67
TPM1-215ENST00000558868 HMGB3O15347 200 aaKnown RBP10.85□□□□□ -0.67
TPM1-215ENST00000558868 SNAPINO95295 136 aa10.85□□□□□ -0.67
TPM1-215ENST00000558868 SRP19P09132 144 aaKnown RBP10.85□□□□□ -0.67
TPM1-215ENST00000558868 LY6EQ16553 131 aa10.85□□□□□ -0.67
TPM1-215ENST00000558868 SOHLH1Q5JUK2 328 aa10.85□□□□□ -0.67
TPM1-215ENST00000558868 C10orf113Q5VZT2 155 aa10.85□□□□□ -0.67
TPM1-215ENST00000558868 PQLC2Q6ZP29 291 aa10.85□□□□□ -0.67
TPM1-215ENST00000558868 OR5T1Q8NG75 326 aa10.85□□□□□ -0.67
TPM1-215ENST00000558868 SUN5Q8TC36 379 aa10.85□□□□□ -0.67
TPM1-215ENST00000558868 VN1R17PQ8TDU5 208 aa10.85□□□□□ -0.67
TPM1-215ENST00000558868 TXN2Q99757 166 aa10.85□□□□□ -0.67
TPM1-215ENST00000558868 CR1P17927 2039 aa10.84□□□□□ -0.67
TPM1-215ENST00000558868 IGHV3-21A0A0B4J1V1 117 aa10.84□□□□□ -0.67
TPM1-215ENST00000558868 IGLC1P0CG04 106 aa10.84□□□□□ -0.67
TPM1-215ENST00000558868 ARL14EPLP0DKL9 152 aa10.84□□□□□ -0.67
TPM1-215ENST00000558868 C8orf88P0DMB2 117 aa10.84□□□□□ -0.67
TPM1-215ENST00000558868 ADCYAP1P18509 176 aa10.84□□□□□ -0.67
TPM1-215ENST00000558868 GATA2P23769 480 aaPredicted RBP10.84□□□□□ -0.67
TPM1-215ENST00000558868 PLP1P60201 277 aa10.84□□□□□ -0.67
TPM1-215ENST00000558868 ZNF90Q03938 601 aa10.84□□□□□ -0.67
TPM1-215ENST00000558868 ECSCRQ19T08 205 aa10.84□□□□□ -0.67
TPM1-215ENST00000558868 DEFB112Q30KQ8 113 aa10.84□□□□□ -0.67
TPM1-215ENST00000558868 SPNS3Q6ZMD2 512 aa10.84□□□□□ -0.67
TPM1-215ENST00000558868 S100A7AQ86SG5 101 aa10.84□□□□□ -0.67
TPM1-215ENST00000558868 WFDC11Q8NEX6 87 aa10.84□□□□□ -0.67
TPM1-215ENST00000558868 SEPSECSQ9HD40 501 aaKnown RBP10.84□□□□□ -0.67
TPM1-215ENST00000558868 TMEM167BQ9NRX6 74 aa10.84□□□□□ -0.67
TPM1-215ENST00000558868 GAR1Q9NY12 217 aaKnown RBP10.84□□□□□ -0.67
TPM1-215ENST00000558868 C21orf62Q9NYP8 219 aa10.84□□□□□ -0.67
TPM1-215ENST00000558868 FBXL7Q9UJT9 491 aa10.84□□□□□ -0.67
TPM1-215ENST00000558868 CSMD2Q7Z408 3487 aa10.84□□□□□ -0.67
TPM1-215ENST00000558868 PRRC2AP48634 2157 aaKnown RBP10.83□□□□□ -0.68
TPM1-215ENST00000558868 TRAV41A0A0B4J266 112 aa10.83□□□□□ -0.68
TPM1-215ENST00000558868 PSMB11A5LHX3 300 aa10.83□□□□□ -0.68
TPM1-215ENST00000558868 GNG7O60262 68 aa10.83□□□□□ -0.68
TPM1-215ENST00000558868 HYPMO75409 117 aa10.83□□□□□ -0.68
TPM1-215ENST00000558868 AMY1AP04745 511 aa10.83□□□□□ -0.68
TPM1-215ENST00000558868 GCHFRP30047 84 aa10.83□□□□□ -0.68
TPM1-215ENST00000558868 FCGR2BP31994 310 aaPredicted RBP10.83□□□□□ -0.68
TPM1-215ENST00000558868 MEF2BQ02080 365 aaPredicted RBP10.83□□□□□ -0.68
TPM1-215ENST00000558868 C9orf152Q5JTZ5 239 aa10.83□□□□□ -0.68
TPM1-215ENST00000558868 MIR17HGQ75NE6 70 aa10.83□□□□□ -0.68
TPM1-215ENST00000558868 STXBP6Q8NFX7 210 aa10.83□□□□□ -0.68
TPM1-215ENST00000558868 TMPRSS5Q9H3S3 457 aa10.83□□□□□ -0.68
TPM1-215ENST00000558868 SOX21Q9Y651 276 aaPredicted RBP10.83□□□□□ -0.68
TPM1-215ENST00000558868 ARL2-SNX15V9GYD0 113 aa10.83□□□□□ -0.68
TPM1-215ENST00000558868 TMEM250H0YL14 139 aa10.82□□□□□ -0.68
TPM1-215ENST00000558868 OR2J3O76001 311 aa10.82□□□□□ -0.68
TPM1-215ENST00000558868 IGHG2P01859 326 aa10.82□□□□□ -0.68
TPM1-215ENST00000558868 IGF1P05019 195 aa10.82□□□□□ -0.68
TPM1-215ENST00000558868 RD3LP0DJH9 198 aa10.82□□□□□ -0.68
TPM1-215ENST00000558868 IER3P46695 156 aa10.82□□□□□ -0.68
TPM1-215ENST00000558868 YPEL3P61236 119 aaPredicted RBP10.82□□□□□ -0.68
TPM1-215ENST00000558868 Q56UQ5 140 aa10.82□□□□□ -0.68
TPM1-215ENST00000558868 SPATA31B1PQ5VZV4 182 aa10.82□□□□□ -0.68
TPM1-215ENST00000558868 BCL6BQ8N143 479 aaPredicted RBP10.82□□□□□ -0.68
TPM1-215ENST00000558868 NECAP1Q8NC96 275 aa10.82□□□□□ -0.68
TPM1-215ENST00000558868 TMEM37Q8WXS4 190 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms