RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 GSG1LQ6UXU4 331 aa9.25□□□□□ -0.93
SMAD3-208ENST00000558827 STXBP6Q8NFX7 210 aa9.25□□□□□ -0.93
SMAD3-208ENST00000558827 IL22RA2Q969J5 263 aa9.25□□□□□ -0.93
SMAD3-208ENST00000558827 MS4A6AQ9H2W1 248 aa9.25□□□□□ -0.93
SMAD3-208ENST00000558827 VSIRQ9H7M9 311 aa9.25□□□□□ -0.93
SMAD3-208ENST00000558827 MAP6D1Q9H9H5 199 aa9.25□□□□□ -0.93
SMAD3-208ENST00000558827 SHPKQ9UHJ6 478 aa9.25□□□□□ -0.93
SMAD3-208ENST00000558827 A0A0J9YWU9 116 aa9.24□□□□□ -0.93
SMAD3-208ENST00000558827 SPRY2O43597 315 aa9.24□□□□□ -0.93
SMAD3-208ENST00000558827 HOXB5P09067 269 aa9.24□□□□□ -0.93
SMAD3-208ENST00000558827 IGLC1P0CG04 106 aa9.24□□□□□ -0.93
SMAD3-208ENST00000558827 OR10J1P30954 320 aa9.24□□□□□ -0.93
SMAD3-208ENST00000558827 APOC4P55056 127 aa9.24□□□□□ -0.93
SMAD3-208ENST00000558827 AP3S2P59780 193 aa9.24□□□□□ -0.93
SMAD3-208ENST00000558827 PAFAH1B2P68402 229 aa9.24□□□□□ -0.93
SMAD3-208ENST00000558827 PPP1R1AQ13522 171 aa9.24□□□□□ -0.93
SMAD3-208ENST00000558827 BAK1Q16611 211 aa9.24□□□□□ -0.93
SMAD3-208ENST00000558827 STPG3Q8N7X2 389 aa9.24□□□□□ -0.93
SMAD3-208ENST00000558827 DTD1Q8TEA8 209 aa9.24□□□□□ -0.93
SMAD3-208ENST00000558827 METTL26Q96S19 204 aa9.24□□□□□ -0.93
SMAD3-208ENST00000558827 MAGT1Q9H0U3 335 aa9.24□□□□□ -0.93
SMAD3-208ENST00000558827 PLECQ15149 4684 aaKnown RBP9.23□□□□□ -0.93
SMAD3-208ENST00000558827 IFNA4P05014 189 aa9.23□□□□□ -0.93
SMAD3-208ENST00000558827 P2RY1P47900 373 aa9.23□□□□□ -0.93
SMAD3-208ENST00000558827 INPP1P49441 399 aa9.23□□□□□ -0.93
SMAD3-208ENST00000558827 SPANXN2Q5MJ10 180 aa9.23□□□□□ -0.93
SMAD3-208ENST00000558827 OR1S2Q8NGQ3 325 aa9.23□□□□□ -0.93
SMAD3-208ENST00000558827 RNASEH2CQ8TDP1 164 aaKnown RBP9.23□□□□□ -0.93
SMAD3-208ENST00000558827 Q8WTZ3 238 aa9.23□□□□□ -0.93
SMAD3-208ENST00000558827 SRRQ9GZT4 340 aa9.23□□□□□ -0.93
SMAD3-208ENST00000558827 NDUFA13Q9P0J0 144 aa9.23□□□□□ -0.93
SMAD3-208ENST00000558827 HSPB7Q9UBY9 170 aa9.23□□□□□ -0.93
SMAD3-208ENST00000558827 FLVCR2Q9UPI3 526 aa9.23□□□□□ -0.93
SMAD3-208ENST00000558827 TRAV30A0A087WSZ9 112 aa9.22□□□□□ -0.93
SMAD3-208ENST00000558827 LCE6AA0A183 80 aa9.22□□□□□ -0.93
SMAD3-208ENST00000558827 KNCNA6PVL3 124 aa9.22□□□□□ -0.93
SMAD3-208ENST00000558827 ZNF701M0R085 212 aaPredicted RBP9.22□□□□□ -0.93
SMAD3-208ENST00000558827 SFT2D2O95562 160 aa9.22□□□□□ -0.93
SMAD3-208ENST00000558827 ZNF688P0C7X2 276 aa9.22□□□□□ -0.93
SMAD3-208ENST00000558827 BMI1P35226 326 aa9.22□□□□□ -0.93
SMAD3-208ENST00000558827 USF2Q15853 346 aaPredicted RBP9.22□□□□□ -0.93
SMAD3-208ENST00000558827 TMEM128Q5BJH2 165 aa9.22□□□□□ -0.93
SMAD3-208ENST00000558827 LYG2Q86SG7 212 aa9.22□□□□□ -0.93
SMAD3-208ENST00000558827 OR51G1Q8NGK1 321 aa9.22□□□□□ -0.93
SMAD3-208ENST00000558827 LYSTQ99698 3801 aa9.21□□□□□ -0.93
SMAD3-208ENST00000558827 A0A1W2PS18 150 aa9.21□□□□□ -0.94
SMAD3-208ENST00000558827 CXorf65A6NEN9 183 aa9.21□□□□□ -0.94
SMAD3-208ENST00000558827 SCGB2A1O75556 95 aa9.21□□□□□ -0.94
SMAD3-208ENST00000558827 IL4P05112 153 aa9.21□□□□□ -0.94
SMAD3-208ENST00000558827 RD3LP0DJH9 198 aa9.21□□□□□ -0.94
SMAD3-208ENST00000558827 SLC25A4P12235 298 aa9.21□□□□□ -0.94
SMAD3-208ENST00000558827 CRYBB3P26998 211 aa9.21□□□□□ -0.94
SMAD3-208ENST00000558827 SRPXP78539 464 aa9.21□□□□□ -0.94
SMAD3-208ENST00000558827 OR2F1Q13607 317 aa9.21□□□□□ -0.94
SMAD3-208ENST00000558827 TRIQKQ629K1 86 aa9.21□□□□□ -0.94
SMAD3-208ENST00000558827 Q6ZWC4 215 aa9.21□□□□□ -0.94
SMAD3-208ENST00000558827 CENPSQ8N2Z9 138 aa9.21□□□□□ -0.94
SMAD3-208ENST00000558827 RNF183Q96D59 192 aa9.21□□□□□ -0.94
SMAD3-208ENST00000558827 SDHCQ99643 169 aaPredicted RBP9.21□□□□□ -0.94
SMAD3-208ENST00000558827 PBDC1Q9BVG4 233 aa9.21□□□□□ -0.94
SMAD3-208ENST00000558827 CSTL1Q9H114 145 aa9.21□□□□□ -0.94
SMAD3-208ENST00000558827 TMEM231Q9H6L2 316 aa9.21□□□□□ -0.94
SMAD3-208ENST00000558827 MPTX1A8MV57 137 aa9.2□□□□□ -0.94
SMAD3-208ENST00000558827 WRBO00258 174 aa9.2□□□□□ -0.94
SMAD3-208ENST00000558827 UBE2CO00762 179 aa9.2□□□□□ -0.94
SMAD3-208ENST00000558827 DEFB4AO15263 64 aa9.2□□□□□ -0.94
SMAD3-208ENST00000558827 PITX3O75364 302 aa9.2□□□□□ -0.94
SMAD3-208ENST00000558827 ADAP1O75689 374 aa9.2□□□□□ -0.94
SMAD3-208ENST00000558827 HNRNPCP07910 306 aaKnown RBP eCLIP9.2□□□□□ -0.941e-6■■■□□ 15.8
SMAD3-208ENST00000558827 PSG1P11464 419 aa9.2□□□□□ -0.94
SMAD3-208ENST00000558827 CMC4P56277 68 aaPredicted RBP9.2□□□□□ -0.94
SMAD3-208ENST00000558827 YPEL3P61236 119 aaPredicted RBP9.2□□□□□ -0.94
SMAD3-208ENST00000558827 ZNF90Q03938 601 aa9.2□□□□□ -0.94
SMAD3-208ENST00000558827 DHRS2Q13268 280 aa9.2□□□□□ -0.94
SMAD3-208ENST00000558827 GGNBP1Q5YKI7 109 aa9.2□□□□□ -0.94
SMAD3-208ENST00000558827 ETFRF1Q6IPR1 90 aa9.2□□□□□ -0.94
SMAD3-208ENST00000558827 IL17DQ8TAD2 202 aa9.2□□□□□ -0.94
SMAD3-208ENST00000558827 NARS2Q96I59 477 aaKnown RBP9.2□□□□□ -0.94
SMAD3-208ENST00000558827 SLC25A21Q9BQT8 299 aaPredicted RBP9.2□□□□□ -0.94
SMAD3-208ENST00000558827 U3KQ87 197 aa9.2□□□□□ -0.94
SMAD3-208ENST00000558827 KIR2DL5BA0A0G2JN68 375 aa9.19□□□□□ -0.94
SMAD3-208ENST00000558827 KIR2DL5BA0A0G2JPC4 375 aa9.19□□□□□ -0.94
SMAD3-208ENST00000558827 ZFP92A6NM28 416 aa9.19□□□□□ -0.94
SMAD3-208ENST00000558827 H3BP45 60 aa9.19□□□□□ -0.94
SMAD3-208ENST00000558827 K7EQG2 157 aa9.19□□□□□ -0.94
SMAD3-208ENST00000558827 CA1P00915 261 aaPredicted RBP9.19□□□□□ -0.94
SMAD3-208ENST00000558827 GAMTQ14353 236 aa9.19□□□□□ -0.94
SMAD3-208ENST00000558827 C16orf54Q6UWD8 224 aa9.19□□□□□ -0.94
SMAD3-208ENST00000558827 NOXA1Q86UR1 476 aa9.19□□□□□ -0.94
SMAD3-208ENST00000558827 KIR2DL5AQ8N109 375 aa9.19□□□□□ -0.94
SMAD3-208ENST00000558827 KIR2DL5BQ8NHK3 375 aa9.19□□□□□ -0.94
SMAD3-208ENST00000558827 GRAMD2BQ96HH9 432 aa9.19□□□□□ -0.94
SMAD3-208ENST00000558827 SLC35E1Q96K37 410 aa9.19□□□□□ -0.94
SMAD3-208ENST00000558827 U3KQE9 123 aa9.19□□□□□ -0.94
SMAD3-208ENST00000558827 DNAH1Q9P2D7 4330 aa9.18□□□□□ -0.94
SMAD3-208ENST00000558827 IGKV1D-37A0A075B6S9 117 aa9.18□□□□□ -0.94
SMAD3-208ENST00000558827 C9orf170A2RU37 121 aa9.18□□□□□ -0.94
SMAD3-208ENST00000558827 TOMM40O96008 361 aa9.18□□□□□ -0.94
SMAD3-208ENST00000558827 ANXA7P20073 488 aaKnown RBP9.18□□□□□ -0.94
SMAD3-208ENST00000558827 DEFB1P60022 68 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms