RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 CHEK1O14757 476 aa4.89□□□□□ -1.63
SLIRP-203ENST00000554074 GNG7O60262 68 aa4.89□□□□□ -1.63
SLIRP-203ENST00000554074 MT-CO2P00403 227 aa4.89□□□□□ -1.63
SLIRP-203ENST00000554074 IFNA21P01568 189 aa4.89□□□□□ -1.63
SLIRP-203ENST00000554074 SULT1A3P0DMM9 295 aa4.89□□□□□ -1.63
SLIRP-203ENST00000554074 SULT1A4P0DMN0 295 aa4.89□□□□□ -1.63
SLIRP-203ENST00000554074 VAMP1P23763 118 aa4.89□□□□□ -1.63
SLIRP-203ENST00000554074 NPBWR1P48145 328 aa4.89□□□□□ -1.63
SLIRP-203ENST00000554074 SPCS3P61009 180 aa4.89□□□□□ -1.63
SLIRP-203ENST00000554074 IFITM3Q01628 133 aa4.89□□□□□ -1.63
SLIRP-203ENST00000554074 DHRS2Q13268 280 aa4.89□□□□□ -1.63
SLIRP-203ENST00000554074 PPP1R1AQ13522 171 aa4.89□□□□□ -1.63
SLIRP-203ENST00000554074 SP6Q3SY56 376 aa4.89□□□□□ -1.63
SLIRP-203ENST00000554074 C4orf46Q504U0 113 aa4.89□□□□□ -1.63
SLIRP-203ENST00000554074 TMEM268Q5VZI3 342 aa4.89□□□□□ -1.63
SLIRP-203ENST00000554074 FAM90A2PQ658T7 463 aa4.89□□□□□ -1.63
SLIRP-203ENST00000554074 NOXA1Q86UR1 476 aa4.89□□□□□ -1.63
SLIRP-203ENST00000554074 TMEM217Q8N7C4 229 aa4.89□□□□□ -1.63
SLIRP-203ENST00000554074 UBAC2Q8NBM4 344 aa4.89□□□□□ -1.63
SLIRP-203ENST00000554074 TMEM116Q8NCL8 245 aa4.89□□□□□ -1.63
SLIRP-203ENST00000554074 ZNF431Q8TF32 576 aaPredicted RBP4.89□□□□□ -1.63
SLIRP-203ENST00000554074 MITD1Q8WV92 249 aa4.89□□□□□ -1.63
SLIRP-203ENST00000554074 MISP3Q96FF7 219 aa4.89□□□□□ -1.63
SLIRP-203ENST00000554074 GINS3Q9BRX5 216 aa4.89□□□□□ -1.63
SLIRP-203ENST00000554074 PDCD10Q9BUL8 212 aa4.89□□□□□ -1.63
SLIRP-203ENST00000554074 RHPN1-AS1Q9BWJ2 59 aa4.89□□□□□ -1.63
SLIRP-203ENST00000554074 MAP6D1Q9H9H5 199 aa4.89□□□□□ -1.63
SLIRP-203ENST00000554074 UBQLN2Q9UHD9 624 aa4.89□□□□□ -1.63
SLIRP-203ENST00000554074 TRAV14DV4A0A0A6YYC5 116 aa4.88□□□□□ -1.63
SLIRP-203ENST00000554074 A0A0B4J293 547 aa4.88□□□□□ -1.63
SLIRP-203ENST00000554074 A0A0J9YWU9 116 aa4.88□□□□□ -1.63
SLIRP-203ENST00000554074 INMT-MINDY4F8WBC2 141 aa4.88□□□□□ -1.63
SLIRP-203ENST00000554074 ZNF207O43670 478 aaKnown RBP4.88□□□□□ -1.63
SLIRP-203ENST00000554074 MED6O75586 246 aa4.88□□□□□ -1.63
SLIRP-203ENST00000554074 DFFBO76075 338 aa4.88□□□□□ -1.63
SLIRP-203ENST00000554074 IGKV1-5P01602 117 aa4.88□□□□□ -1.63
SLIRP-203ENST00000554074 SNCAP37840 140 aa4.88□□□□□ -1.63
SLIRP-203ENST00000554074 SUB1P53999 127 aaKnown RBP eCLIP4.88□□□□□ -1.63
SLIRP-203ENST00000554074 SMCO1Q147U7 214 aa4.88□□□□□ -1.63
SLIRP-203ENST00000554074 DEFB135Q30KP9 77 aa4.88□□□□□ -1.63
SLIRP-203ENST00000554074 NMSQ5H8A3 153 aa4.88□□□□□ -1.63
SLIRP-203ENST00000554074 ZNF600Q6ZNG1 722 aa4.88□□□□□ -1.63
SLIRP-203ENST00000554074 NRARPQ7Z6K4 114 aa4.88□□□□□ -1.63
SLIRP-203ENST00000554074 SLC35G3Q8N808 338 aa4.88□□□□□ -1.63
SLIRP-203ENST00000554074 GATAD1Q8WUU5 269 aa4.88□□□□□ -1.63
SLIRP-203ENST00000554074 LINC00476Q8WZB0 136 aa4.88□□□□□ -1.63
SLIRP-203ENST00000554074 RNF2Q99496 336 aa4.88□□□□□ -1.63
SLIRP-203ENST00000554074 VSIRQ9H7M9 311 aa4.88□□□□□ -1.63
SLIRP-203ENST00000554074 ENY2Q9NPA8 101 aa4.88□□□□□ -1.63
SLIRP-203ENST00000554074 FLVCR2Q9UPI3 526 aa4.88□□□□□ -1.63
SLIRP-203ENST00000554074 HYDINQ4G0P3 5121 aa4.88□□□□□ -1.63
SLIRP-203ENST00000554074 TRAV6A0A075B6T7 132 aa4.87□□□□□ -1.63
SLIRP-203ENST00000554074 IGHV3OR16-8A0A075B7F1 116 aa4.87□□□□□ -1.63
SLIRP-203ENST00000554074 CXorf65A6NEN9 183 aa4.87□□□□□ -1.63
SLIRP-203ENST00000554074 ST8SIA3O43173 380 aa4.87□□□□□ -1.63
SLIRP-203ENST00000554074 YIF1AO95070 293 aa4.87□□□□□ -1.63
SLIRP-203ENST00000554074 TMEM50AO95807 157 aa4.87□□□□□ -1.63
SLIRP-203ENST00000554074 ANXA7P20073 488 aaKnown RBP4.87□□□□□ -1.63
SLIRP-203ENST00000554074 PAFAH1B2P68402 229 aa4.87□□□□□ -1.63
SLIRP-203ENST00000554074 CYCSP99999 105 aaKnown RBP4.87□□□□□ -1.63
SLIRP-203ENST00000554074 RGS21Q2M5E4 152 aa4.87□□□□□ -1.63
SLIRP-203ENST00000554074 BSXQ3C1V8 233 aa4.87□□□□□ -1.63
SLIRP-203ENST00000554074 CEMP1Q6PRD7 247 aaPredicted RBP4.87□□□□□ -1.63
SLIRP-203ENST00000554074 TOMM20LQ6UXN7 152 aa4.87□□□□□ -1.63
SLIRP-203ENST00000554074 C12orf45Q8N5I9 185 aaPredicted RBP4.87□□□□□ -1.63
SLIRP-203ENST00000554074 LHFPL5Q8TAF8 219 aa4.87□□□□□ -1.63
SLIRP-203ENST00000554074 PINX1Q96BK5 328 aaKnown RBP4.87□□□□□ -1.63
SLIRP-203ENST00000554074 GPR146Q96CH1 333 aa4.87□□□□□ -1.63
SLIRP-203ENST00000554074 CIB3Q96Q77 187 aaPredicted RBP4.87□□□□□ -1.63
SLIRP-203ENST00000554074 CSTL1Q9H114 145 aa4.87□□□□□ -1.63
SLIRP-203ENST00000554074 TMEM231Q9H6L2 316 aa4.87□□□□□ -1.63
SLIRP-203ENST00000554074 ZFAND3Q9H8U3 227 aa4.87□□□□□ -1.63
SLIRP-203ENST00000554074 HSPB7Q9UBY9 170 aa4.87□□□□□ -1.63
SLIRP-203ENST00000554074 CACNG5Q9UF02 275 aa4.87□□□□□ -1.63
SLIRP-203ENST00000554074 KLK5Q9Y337 293 aaPredicted RBP4.87□□□□□ -1.63
SLIRP-203ENST00000554074 A0A1W2PS18 150 aa4.86□□□□□ -1.63
SLIRP-203ENST00000554074 MPTX1A8MV57 137 aa4.86□□□□□ -1.63
SLIRP-203ENST00000554074 PITX3O75364 302 aa4.86□□□□□ -1.63
SLIRP-203ENST00000554074 CLN5O75503 358 aa4.86□□□□□ -1.63
SLIRP-203ENST00000554074 SCGB2A1O75556 95 aa4.86□□□□□ -1.63
SLIRP-203ENST00000554074 IFNA17P01571 189 aa4.86□□□□□ -1.63
SLIRP-203ENST00000554074 RNASE2P10153 161 aaKnown RBP4.86□□□□□ -1.63
SLIRP-203ENST00000554074 RPL35AP18077 110 aaKnown RBP4.86□□□□□ -1.63
SLIRP-203ENST00000554074 HTR2BP41595 481 aa4.86□□□□□ -1.63
SLIRP-203ENST00000554074 RPP30P78346 268 aaKnown RBP4.86□□□□□ -1.63
SLIRP-203ENST00000554074 EWSR1Q01844 656 aaKnown RBP eCLIP4.86□□□□□ -1.63
SLIRP-203ENST00000554074 IZUMO4Q1ZYL8 232 aa4.86□□□□□ -1.63
SLIRP-203ENST00000554074 GGNBP1Q5YKI7 109 aa4.86□□□□□ -1.63
SLIRP-203ENST00000554074 TCF24Q7RTU0 167 aa4.86□□□□□ -1.63
SLIRP-203ENST00000554074 LYZL2Q7Z4W2 148 aa4.86□□□□□ -1.63
SLIRP-203ENST00000554074 APRG1Q8IVJ8 170 aa4.86□□□□□ -1.63
SLIRP-203ENST00000554074 OR4X1Q8NH49 305 aa4.86□□□□□ -1.63
SLIRP-203ENST00000554074 OR1S1Q8NH92 325 aa4.86□□□□□ -1.63
SLIRP-203ENST00000554074 ASB13Q8WXK3 278 aa4.86□□□□□ -1.63
SLIRP-203ENST00000554074 ST8SIA2Q92186 375 aa4.86□□□□□ -1.63
SLIRP-203ENST00000554074 C11orf68Q9H3H3 251 aaKnown RBP4.86□□□□□ -1.63
SLIRP-203ENST00000554074 U3KQ87 197 aa4.86□□□□□ -1.63
SLIRP-203ENST00000554074 TRAV30A0A087WSZ9 112 aa4.85□□□□□ -1.63
SLIRP-203ENST00000554074 IGHV3-49A0A0A0MS15 119 aa4.85□□□□□ -1.63
SLIRP-203ENST00000554074 RPS10-NUDT3A0A1W2PQS6 291 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms