RNA–Protein interactions for RNA: ENST00000553300.5

HNRNPC-205, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-205ENST00000553300 TMED3Q9Y3Q3 217 aa9.78□□□□□ -0.84
HNRNPC-205ENST00000553300 IGHV3-49A0A0A0MS15 119 aa9.77□□□□□ -0.84
HNRNPC-205ENST00000553300 TRAV2A0A0B4J234 112 aa9.77□□□□□ -0.84
HNRNPC-205ENST00000553300 IGKV1-17P01599 117 aa9.77□□□□□ -0.84
HNRNPC-205ENST00000553300 VAMP1P23763 118 aa9.77□□□□□ -0.84
HNRNPC-205ENST00000553300 CRYBB3P26998 211 aa9.77□□□□□ -0.84
HNRNPC-205ENST00000553300 YPEL3P61236 119 aaPredicted RBP9.77□□□□□ -0.84
HNRNPC-205ENST00000553300 TRIQKQ629K1 86 aa9.77□□□□□ -0.84
HNRNPC-205ENST00000553300 PRSS54Q6PEW0 395 aa9.77□□□□□ -0.84
HNRNPC-205ENST00000553300 TCF24Q7RTU0 167 aa9.77□□□□□ -0.84
HNRNPC-205ENST00000553300 CENPSQ8N2Z9 138 aa9.77□□□□□ -0.84
HNRNPC-205ENST00000553300 OR1S1Q8NH92 325 aa9.77□□□□□ -0.84
HNRNPC-205ENST00000553300 Q8WTZ3 238 aa9.77□□□□□ -0.84
HNRNPC-205ENST00000553300 ST8SIA2Q92186 375 aa9.77□□□□□ -0.84
HNRNPC-205ENST00000553300 GRAMD2BQ96HH9 432 aa9.77□□□□□ -0.84
HNRNPC-205ENST00000553300 MRPL36Q9P0J6 103 aaKnown RBP9.77□□□□□ -0.84
HNRNPC-205ENST00000553300 UBQLN2Q9UHD9 624 aa9.77□□□□□ -0.84
HNRNPC-205ENST00000553300 TP53TG1Q9Y2A0 90 aa9.77□□□□□ -0.84
HNRNPC-205ENST00000553300 IGHV3OR16-13A0A075B7E8 117 aa9.76□□□□□ -0.85
HNRNPC-205ENST00000553300 IGHV3-74A0A0B4J1X5 117 aa9.76□□□□□ -0.85
HNRNPC-205ENST00000553300 FAM90A26D6RGX4 464 aa9.76□□□□□ -0.85
HNRNPC-205ENST00000553300 DNASE2O00115 360 aaPredicted RBP9.76□□□□□ -0.85
HNRNPC-205ENST00000553300 DFFBO76075 338 aa9.76□□□□□ -0.85
HNRNPC-205ENST00000553300 IGLC1P0CG04 106 aa9.76□□□□□ -0.85
HNRNPC-205ENST00000553300 OR10J1P30954 320 aa9.76□□□□□ -0.85
HNRNPC-205ENST00000553300 RND2P52198 227 aa9.76□□□□□ -0.85
HNRNPC-205ENST00000553300 RBKSQ9H477 322 aa9.76□□□□□ -0.85
HNRNPC-205ENST00000553300 RETNQ9HD89 108 aa9.76□□□□□ -0.85
HNRNPC-205ENST00000553300 RYR3Q15413 4870 aa9.76□□□□□ -0.85
HNRNPC-205ENST00000553300 CENPXA8MT69 81 aa9.75□□□□□ -0.85
HNRNPC-205ENST00000553300 PITX3O75364 302 aa9.75□□□□□ -0.85
HNRNPC-205ENST00000553300 MED6O75586 246 aa9.75□□□□□ -0.85
HNRNPC-205ENST00000553300 NXPH3O95157 252 aa9.75□□□□□ -0.85
HNRNPC-205ENST00000553300 SFT2D2O95562 160 aa9.75□□□□□ -0.85
HNRNPC-205ENST00000553300 GPX4P36969 197 aaPredicted RBP9.75□□□□□ -0.85
HNRNPC-205ENST00000553300 EIF2B2P49770 351 aaKnown RBP9.75□□□□□ -0.85
HNRNPC-205ENST00000553300 RPL11P62913 178 aaKnown RBP9.75□□□□□ -0.85
HNRNPC-205ENST00000553300 TIGITQ495A1 244 aa9.75□□□□□ -0.85
HNRNPC-205ENST00000553300 WFDC3Q8IUB2 231 aa9.75□□□□□ -0.85
HNRNPC-205ENST00000553300 STPG3Q8N7X2 389 aa9.75□□□□□ -0.85
HNRNPC-205ENST00000553300 TMEM170AQ8WVE7 144 aa9.75□□□□□ -0.85
HNRNPC-205ENST00000553300 C7orf50Q9BRJ6 194 aaKnown RBP9.75□□□□□ -0.85
HNRNPC-205ENST00000553300 STARD9Q9P2P6 4700 aa9.75□□□□□ -0.85
HNRNPC-205ENST00000553300 APOHP02749 345 aaPredicted RBP9.75□□□□□ -0.85
HNRNPC-205ENST00000553300 IFNA4P05014 189 aa9.75□□□□□ -0.85
HNRNPC-205ENST00000553300 TFPI2P48307 235 aa9.75□□□□□ -0.85
HNRNPC-205ENST00000553300 AP2S1P53680 142 aaPredicted RBP9.75□□□□□ -0.85
HNRNPC-205ENST00000553300 PPP1R1AQ13522 171 aa9.75□□□□□ -0.85
HNRNPC-205ENST00000553300 BAK1Q16611 211 aa9.75□□□□□ -0.85
HNRNPC-205ENST00000553300 CNPY1Q3B7I2 92 aa9.75□□□□□ -0.85
HNRNPC-205ENST00000553300 NPIPB3Q92617 1050 aa9.75□□□□□ -0.85
HNRNPC-205ENST00000553300 CIB3Q96Q77 187 aaPredicted RBP9.75□□□□□ -0.85
HNRNPC-205ENST00000553300 OVOL2Q9BRP0 275 aa9.75□□□□□ -0.85
HNRNPC-205ENST00000553300 MS4A6AQ9H2W1 248 aa9.75□□□□□ -0.85
HNRNPC-205ENST00000553300 MAP6D1Q9H9H5 199 aa9.75□□□□□ -0.85
HNRNPC-205ENST00000553300 IGKV3-7A0A075B6H7 116 aa9.74□□□□□ -0.85
HNRNPC-205ENST00000553300 HELTA6NFD8 242 aa9.74□□□□□ -0.85
HNRNPC-205ENST00000553300 SPRY2O43597 315 aa9.74□□□□□ -0.85
HNRNPC-205ENST00000553300 NDUFB6O95139 128 aa9.74□□□□□ -0.85
HNRNPC-205ENST00000553300 RD3LP0DJH9 198 aa9.74□□□□□ -0.85
HNRNPC-205ENST00000553300 RAB11AP62491 216 aa9.74□□□□□ -0.85
HNRNPC-205ENST00000553300 RPP30P78346 268 aaKnown RBP9.74□□□□□ -0.85
HNRNPC-205ENST00000553300 LILRB2Q8N423 598 aa9.74□□□□□ -0.85
HNRNPC-205ENST00000553300 GBGT1Q8N5D6 347 aa9.74□□□□□ -0.85
HNRNPC-205ENST00000553300 ACY3Q96HD9 319 aa9.74□□□□□ -0.85
HNRNPC-205ENST00000553300 PFDN2Q9UHV9 154 aa9.74□□□□□ -0.85
HNRNPC-205ENST00000553300 U3KQE9 123 aa9.74□□□□□ -0.85
HNRNPC-205ENST00000553300 TENM2Q9NT68 2774 aa9.74□□□□□ -0.85
HNRNPC-205ENST00000553300 LYSTQ99698 3801 aa9.73□□□□□ -0.85
HNRNPC-205ENST00000553300 IGHV3-66A0A0C4DH42 116 aa9.73□□□□□ -0.85
HNRNPC-205ENST00000553300 TOMM40O96008 361 aa9.73□□□□□ -0.85
HNRNPC-205ENST00000553300 HNRNPCP07910 306 aaKnown RBP eCLIP9.73□□□□□ -0.853e-7■■□□□ 12.3
HNRNPC-205ENST00000553300 P2RY1P47900 373 aa9.73□□□□□ -0.85
HNRNPC-205ENST00000553300 ZFAND6Q6FIF0 208 aa9.73□□□□□ -0.85
HNRNPC-205ENST00000553300 APRG1Q8IVJ8 170 aa9.73□□□□□ -0.85
HNRNPC-205ENST00000553300 CSTL1Q9H114 145 aa9.73□□□□□ -0.85
HNRNPC-205ENST00000553300 IL4P05112 153 aa9.72□□□□□ -0.85
HNRNPC-205ENST00000553300 FABP1P07148 127 aa9.72□□□□□ -0.85
HNRNPC-205ENST00000553300 RPL35AP18077 110 aaKnown RBP9.72□□□□□ -0.85
HNRNPC-205ENST00000553300 NUP62P37198 522 aaPredicted RBP9.72□□□□□ -0.85
HNRNPC-205ENST00000553300 COQ8AQ8NI60 647 aa9.72□□□□□ -0.85
HNRNPC-205ENST00000553300 RNF183Q96D59 192 aa9.72□□□□□ -0.85
HNRNPC-205ENST00000553300 SLC35E1Q96K37 410 aa9.72□□□□□ -0.85
HNRNPC-205ENST00000553300 RABAC1Q9UI14 185 aa9.72□□□□□ -0.85
HNRNPC-205ENST00000553300 C9orf170A2RU37 121 aa9.71□□□□□ -0.86
HNRNPC-205ENST00000553300 MPTX1A8MV57 137 aa9.71□□□□□ -0.86
HNRNPC-205ENST00000553300 SYNGR2O43760 224 aa9.71□□□□□ -0.86
HNRNPC-205ENST00000553300 HOXB5P09067 269 aa9.71□□□□□ -0.86
HNRNPC-205ENST00000553300 GAMTQ14353 236 aa9.71□□□□□ -0.86
HNRNPC-205ENST00000553300 DEFB135Q30KP9 77 aa9.71□□□□□ -0.86
HNRNPC-205ENST00000553300 C16orf54Q6UWD8 224 aa9.71□□□□□ -0.86
HNRNPC-205ENST00000553300 OR51G1Q8NGK1 321 aa9.71□□□□□ -0.86
HNRNPC-205ENST00000553300 SDHCQ99643 169 aaPredicted RBP9.71□□□□□ -0.86
HNRNPC-205ENST00000553300 ZFP92A6NM28 416 aa9.7□□□□□ -0.86
HNRNPC-205ENST00000553300 K7EQG2 157 aa9.7□□□□□ -0.86
HNRNPC-205ENST00000553300 IFNA21P01568 189 aa9.7□□□□□ -0.86
HNRNPC-205ENST00000553300 OR4E1P0C645 316 aa9.7□□□□□ -0.86
HNRNPC-205ENST00000553300 PSG1P11464 419 aa9.7□□□□□ -0.86
HNRNPC-205ENST00000553300 IL7P13232 177 aa9.7□□□□□ -0.86
HNRNPC-205ENST00000553300 ATF4P18848 351 aaPredicted RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms