RNA–Protein interactions for RNA: ENST00000552127.5

BRF1-220, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-220ENST00000552127 CD5P06127 495 aa11.4□□□□□ -0.58
BRF1-220ENST00000552127 NPY1RP25929 384 aa11.4□□□□□ -0.58
BRF1-220ENST00000552127 CCR6P51684 374 aa11.4□□□□□ -0.58
BRF1-220ENST00000552127 SMCO1Q147U7 214 aa11.4□□□□□ -0.58
BRF1-220ENST00000552127 TCF24Q7RTU0 167 aa11.4□□□□□ -0.58
BRF1-220ENST00000552127 LYZL2Q7Z4W2 148 aa11.4□□□□□ -0.58
BRF1-220ENST00000552127 TMED4Q7Z7H5 227 aa11.4□□□□□ -0.58
BRF1-220ENST00000552127 RNASEH2CQ8TDP1 164 aaKnown RBP11.4□□□□□ -0.58
BRF1-220ENST00000552127 TMEM170AQ8WVE7 144 aa11.4□□□□□ -0.58
BRF1-220ENST00000552127 HSPB7Q9UBY9 170 aa11.4□□□□□ -0.58
BRF1-220ENST00000552127 DNAH2Q9P225 4427 aa11.4□□□□□ -0.58
BRF1-220ENST00000552127 IGKV3-7A0A075B6H7 116 aa11.39□□□□□ -0.59
BRF1-220ENST00000552127 TRAV30A0A087WSZ9 112 aa11.39□□□□□ -0.59
BRF1-220ENST00000552127 PIGBOS1A0A0B4J2F0 54 aa11.39□□□□□ -0.59
BRF1-220ENST00000552127 IGKV1-17P01599 117 aa11.39□□□□□ -0.59
BRF1-220ENST00000552127 APOHP02749 345 aaPredicted RBP11.39□□□□□ -0.59
BRF1-220ENST00000552127 SLC25A4P12235 298 aa11.39□□□□□ -0.59
BRF1-220ENST00000552127 TFPI2P48307 235 aa11.39□□□□□ -0.59
BRF1-220ENST00000552127 TNFRSF9Q07011 255 aa11.39□□□□□ -0.59
BRF1-220ENST00000552127 TIGITQ495A1 244 aa11.39□□□□□ -0.59
BRF1-220ENST00000552127 SPANXN2Q5MJ10 180 aa11.39□□□□□ -0.59
BRF1-220ENST00000552127 LGALS9CQ6DKI2 356 aa11.39□□□□□ -0.59
BRF1-220ENST00000552127 CEMP1Q6PRD7 247 aaPredicted RBP11.39□□□□□ -0.59
BRF1-220ENST00000552127 OR1S2Q8NGQ3 325 aa11.39□□□□□ -0.59
BRF1-220ENST00000552127 OVOL2Q9BRP0 275 aa11.39□□□□□ -0.59
BRF1-220ENST00000552127 TMEM231Q9H6L2 316 aa11.39□□□□□ -0.59
BRF1-220ENST00000552127 DYNC1H1Q14204 4646 aaKnown RBP11.39□□□□□ -0.59
BRF1-220ENST00000552127 HERC1Q15751 4861 aa11.38□□□□□ -0.59
BRF1-220ENST00000552127 DNAH6Q9C0G6 4158 aa11.38□□□□□ -0.59
BRF1-220ENST00000552127 IGHV3-66A0A0C4DH42 116 aa11.38□□□□□ -0.59
BRF1-220ENST00000552127 DUXBA0A1W2PPF3 345 aa11.38□□□□□ -0.59
BRF1-220ENST00000552127 RND2P52198 227 aa11.38□□□□□ -0.59
BRF1-220ENST00000552127 CMC4P56277 68 aaPredicted RBP11.38□□□□□ -0.59
BRF1-220ENST00000552127 TMEM128Q5BJH2 165 aa11.38□□□□□ -0.59
BRF1-220ENST00000552127 PRSS54Q6PEW0 395 aa11.38□□□□□ -0.59
BRF1-220ENST00000552127 NOXA1Q86UR1 476 aa11.38□□□□□ -0.59
BRF1-220ENST00000552127 GBGT1Q8N5D6 347 aa11.38□□□□□ -0.59
BRF1-220ENST00000552127 DTD1Q8TEA8 209 aa11.38□□□□□ -0.59
BRF1-220ENST00000552127 METTL26Q96S19 204 aa11.38□□□□□ -0.59
BRF1-220ENST00000552127 SLC25A21Q9BQT8 299 aaPredicted RBP11.38□□□□□ -0.59
BRF1-220ENST00000552127 SRRQ9GZT4 340 aa11.38□□□□□ -0.59
BRF1-220ENST00000552127 RBKSQ9H477 322 aa11.38□□□□□ -0.59
BRF1-220ENST00000552127 MAP6D1Q9H9H5 199 aa11.38□□□□□ -0.59
BRF1-220ENST00000552127 KIR2DL5BA0A0G2JN68 375 aa11.37□□□□□ -0.59
BRF1-220ENST00000552127 KIR2DL5BA0A0G2JPC4 375 aa11.37□□□□□ -0.59
BRF1-220ENST00000552127 UBE2CO00762 179 aa11.37□□□□□ -0.59
BRF1-220ENST00000552127 IGLC1P0CG04 106 aa11.37□□□□□ -0.59
BRF1-220ENST00000552127 RPL35AP18077 110 aaKnown RBP11.37□□□□□ -0.59
BRF1-220ENST00000552127 NPPCP23582 126 aa11.37□□□□□ -0.59
BRF1-220ENST00000552127 VAMP1P23763 118 aa11.37□□□□□ -0.59
BRF1-220ENST00000552127 PAFAH1B2P68402 229 aa11.37□□□□□ -0.59
BRF1-220ENST00000552127 ETFRF1Q6IPR1 90 aa11.37□□□□□ -0.59
BRF1-220ENST00000552127 Q6ZWC4 215 aa11.37□□□□□ -0.59
BRF1-220ENST00000552127 APRG1Q8IVJ8 170 aa11.37□□□□□ -0.59
BRF1-220ENST00000552127 KIR2DL5AQ8N109 375 aa11.37□□□□□ -0.59
BRF1-220ENST00000552127 LILRB2Q8N423 598 aa11.37□□□□□ -0.59
BRF1-220ENST00000552127 OR1S1Q8NH92 325 aa11.37□□□□□ -0.59
BRF1-220ENST00000552127 KIR2DL5BQ8NHK3 375 aa11.37□□□□□ -0.59
BRF1-220ENST00000552127 MS4A6AQ9H2W1 248 aa11.37□□□□□ -0.59
BRF1-220ENST00000552127 TP53TG1Q9Y2A0 90 aa11.37□□□□□ -0.59
BRF1-220ENST00000552127 TRAV2A0A0B4J234 112 aa11.36□□□□□ -0.59
BRF1-220ENST00000552127 A0A1W2PS18 150 aa11.36□□□□□ -0.59
BRF1-220ENST00000552127 DFFBO76075 338 aa11.36□□□□□ -0.59
BRF1-220ENST00000552127 IFNA10P01566 189 aa11.36□□□□□ -0.59
BRF1-220ENST00000552127 CRYBB3P26998 211 aa11.36□□□□□ -0.59
BRF1-220ENST00000552127 OR10J1P30954 320 aa11.36□□□□□ -0.59
BRF1-220ENST00000552127 ZNF124Q15973 351 aa11.36□□□□□ -0.59
BRF1-220ENST00000552127 DEFB135Q30KP9 77 aa11.36□□□□□ -0.59
BRF1-220ENST00000552127 STPG3Q8N7X2 389 aa11.36□□□□□ -0.59
BRF1-220ENST00000552127 LRTM2Q8N967 370 aa11.36□□□□□ -0.59
BRF1-220ENST00000552127 U3KQ87 197 aa11.36□□□□□ -0.59
BRF1-220ENST00000552127 DNASE2O00115 360 aaPredicted RBP11.35□□□□□ -0.59
BRF1-220ENST00000552127 SPRY2O43597 315 aa11.35□□□□□ -0.59
BRF1-220ENST00000552127 P2RY1P47900 373 aa11.35□□□□□ -0.59
BRF1-220ENST00000552127 YPEL3P61236 119 aaPredicted RBP11.35□□□□□ -0.59
BRF1-220ENST00000552127 RPL11P62913 178 aaKnown RBP11.35□□□□□ -0.59
BRF1-220ENST00000552127 PPP1R1AQ13522 171 aa11.35□□□□□ -0.59
BRF1-220ENST00000552127 RBMS2Q15434 407 aaKnown RBP11.35□□□□□ -0.59
BRF1-220ENST00000552127 WFDC3Q8IUB2 231 aa11.35□□□□□ -0.59
BRF1-220ENST00000552127 CENPSQ8N2Z9 138 aa11.35□□□□□ -0.59
BRF1-220ENST00000552127 ACY3Q96HD9 319 aa11.35□□□□□ -0.59
BRF1-220ENST00000552127 NARS2Q96I59 477 aaKnown RBP11.35□□□□□ -0.59
BRF1-220ENST00000552127 KLK5Q9Y337 293 aaPredicted RBP11.35□□□□□ -0.59
BRF1-220ENST00000552127 DNAH11Q96DT5 4516 aa11.35□□□□□ -0.59
BRF1-220ENST00000552127 PITX3O75364 302 aa11.34□□□□□ -0.59
BRF1-220ENST00000552127 SFT2D2O95562 160 aa11.34□□□□□ -0.59
BRF1-220ENST00000552127 INPP1P49441 399 aa11.34□□□□□ -0.59
BRF1-220ENST00000552127 EWSR1Q01844 656 aaKnown RBP eCLIP11.34□□□□□ -0.593e-6■■■■□ 20.1
BRF1-220ENST00000552127 TRIQKQ629K1 86 aa11.34□□□□□ -0.59
BRF1-220ENST00000552127 Q8WTZ3 238 aa11.34□□□□□ -0.59
BRF1-220ENST00000552127 NPIPB3Q92617 1050 aa11.34□□□□□ -0.59
BRF1-220ENST00000552127 GRAMD2BQ96HH9 432 aa11.34□□□□□ -0.59
BRF1-220ENST00000552127 PLA2G2EQ9NZK7 142 aa11.34□□□□□ -0.59
BRF1-220ENST00000552127 A0A1B0GVY2 172 aa11.33□□□□□ -0.6
BRF1-220ENST00000552127 SLC25A6P12236 298 aa11.33□□□□□ -0.6
BRF1-220ENST00000552127 ATP5IP56385 69 aaPredicted RBP11.33□□□□□ -0.6
BRF1-220ENST00000552127 UBE2MP61081 183 aaKnown RBP11.33□□□□□ -0.6
BRF1-220ENST00000552127 FAM24BQ8N5W8 94 aa11.33□□□□□ -0.6
BRF1-220ENST00000552127 STXBP6Q8NFX7 210 aa11.33□□□□□ -0.6
BRF1-220ENST00000552127 RNF183Q96D59 192 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms