RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 VCX3AQ9NNX9 186 aa8.33□□□□□ -1.08
PRPF40B-212ENST00000551111 COPZ2Q9P299 210 aa8.33□□□□□ -1.08
PRPF40B-212ENST00000551111 NACAE9PAV3 2078 aa8.33□□□□□ -1.08
PRPF40B-212ENST00000551111 A0A1W2PS18 150 aa8.32□□□□□ -1.08
PRPF40B-212ENST00000551111 TNFAIP8O95379 198 aa8.32□□□□□ -1.08
PRPF40B-212ENST00000551111 CDS2O95674 445 aa8.32□□□□□ -1.08
PRPF40B-212ENST00000551111 RAB3DO95716 219 aa8.32□□□□□ -1.08
PRPF40B-212ENST00000551111 DHRS2Q13268 280 aa8.32□□□□□ -1.08
PRPF40B-212ENST00000551111 C12orf74Q32Q52 190 aa8.32□□□□□ -1.08
PRPF40B-212ENST00000551111 AARDQ4LEZ3 155 aa8.32□□□□□ -1.08
PRPF40B-212ENST00000551111 PSMG4Q5JS54 123 aa8.32□□□□□ -1.08
PRPF40B-212ENST00000551111 C16orf54Q6UWD8 224 aa8.32□□□□□ -1.08
PRPF40B-212ENST00000551111 TMEM229BQ8NBD8 167 aa8.32□□□□□ -1.08
PRPF40B-212ENST00000551111 RRNAD1Q96FB5 475 aaKnown RBP8.32□□□□□ -1.08
PRPF40B-212ENST00000551111 HRH4Q9H3N8 390 aa8.32□□□□□ -1.08
PRPF40B-212ENST00000551111 TMEM231Q9H6L2 316 aa8.32□□□□□ -1.08
PRPF40B-212ENST00000551111 IGHV4-4A0A075B6R2 117 aa8.31□□□□□ -1.08
PRPF40B-212ENST00000551111 CORTO00230 105 aa8.31□□□□□ -1.08
PRPF40B-212ENST00000551111 CTDSP2O14595 271 aa8.31□□□□□ -1.08
PRPF40B-212ENST00000551111 SMIM18P0DKX4 95 aa8.31□□□□□ -1.08
PRPF40B-212ENST00000551111 MIFP14174 115 aa8.31□□□□□ -1.08
PRPF40B-212ENST00000551111 SPCS3P61009 180 aa8.31□□□□□ -1.08
PRPF40B-212ENST00000551111 GDF5OSQ5U4N7 250 aa8.31□□□□□ -1.08
PRPF40B-212ENST00000551111 STEAP1BQ6NZ63 245 aa8.31□□□□□ -1.08
PRPF40B-212ENST00000551111 RNASE11Q8TAA1 199 aaKnown RBP8.31□□□□□ -1.08
PRPF40B-212ENST00000551111 ZFAND1Q8TCF1 268 aa8.31□□□□□ -1.08
PRPF40B-212ENST00000551111 PDCD10Q9BUL8 212 aa8.31□□□□□ -1.08
PRPF40B-212ENST00000551111 TMEM222Q9H0R3 208 aa8.31□□□□□ -1.08
PRPF40B-212ENST00000551111 ENY2Q9NPA8 101 aa8.31□□□□□ -1.08
PRPF40B-212ENST00000551111 HEYLQ9NQ87 328 aaPredicted RBP8.31□□□□□ -1.08
PRPF40B-212ENST00000551111 XCL2Q9UBD3 114 aa8.31□□□□□ -1.08
PRPF40B-212ENST00000551111 CACNG5Q9UF02 275 aa8.31□□□□□ -1.08
PRPF40B-212ENST00000551111 TEX13DA0A0J9YY54 714 aaPredicted RBP8.3□□□□□ -1.08
PRPF40B-212ENST00000551111 C11orf94C9JXX5 98 aa8.3□□□□□ -1.08
PRPF40B-212ENST00000551111 FAM90A26D6RGX4 464 aa8.3□□□□□ -1.08
PRPF40B-212ENST00000551111 GABARAPO95166 117 aa8.3□□□□□ -1.08
PRPF40B-212ENST00000551111 HNRNPCP07910 306 aaKnown RBP eCLIP8.3□□□□□ -1.08
PRPF40B-212ENST00000551111 SPP1P10451 314 aa8.3□□□□□ -1.08
PRPF40B-212ENST00000551111 ZNF182P17025 639 aaPredicted RBP8.3□□□□□ -1.08
PRPF40B-212ENST00000551111 OR10J1P30954 320 aa8.3□□□□□ -1.08
PRPF40B-212ENST00000551111 C2orf83Q53S99 150 aa8.3□□□□□ -1.08
PRPF40B-212ENST00000551111 MZT2AQ6P582 158 aa8.3□□□□□ -1.08
PRPF40B-212ENST00000551111 MORN3Q6PF18 240 aaPredicted RBP8.3□□□□□ -1.08
PRPF40B-212ENST00000551111 NPIPB3Q92617 1050 aa8.3□□□□□ -1.08
PRPF40B-212ENST00000551111 NAA60Q9H7X0 242 aa8.3□□□□□ -1.08
PRPF40B-212ENST00000551111 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.3□□□□□ -1.08
PRPF40B-212ENST00000551111 TBC1D24Q9ULP9 559 aa8.3□□□□□ -1.08
PRPF40B-212ENST00000551111 RYR1P21817 5038 aa8.29□□□□□ -1.08
PRPF40B-212ENST00000551111 TRAV10A0A0B4J240 114 aa8.29□□□□□ -1.08
PRPF40B-212ENST00000551111 A0A1B0GVY2 172 aa8.29□□□□□ -1.08
PRPF40B-212ENST00000551111 HELTA6NFD8 242 aa8.29□□□□□ -1.08
PRPF40B-212ENST00000551111 H3BMM0 161 aa8.29□□□□□ -1.08
PRPF40B-212ENST00000551111 IL4P05112 153 aa8.29□□□□□ -1.08
PRPF40B-212ENST00000551111 TBPP20226 339 aa8.29□□□□□ -1.08
PRPF40B-212ENST00000551111 HTR2BP41595 481 aa8.29□□□□□ -1.08
PRPF40B-212ENST00000551111 TCTAP57738 103 aa8.29□□□□□ -1.08
PRPF40B-212ENST00000551111 FXYD7P58549 80 aa8.29□□□□□ -1.08
PRPF40B-212ENST00000551111 TAS2R19P59542 299 aa8.29□□□□□ -1.08
PRPF40B-212ENST00000551111 YPEL3P61236 119 aaPredicted RBP8.29□□□□□ -1.08
PRPF40B-212ENST00000551111 GPR107Q5VW38 600 aa8.29□□□□□ -1.08
PRPF40B-212ENST00000551111 TMEM268Q5VZI3 342 aa8.29□□□□□ -1.08
PRPF40B-212ENST00000551111 CCDC71LQ8N9Z2 235 aa8.29□□□□□ -1.08
PRPF40B-212ENST00000551111 OR1S2Q8NGQ3 325 aa8.29□□□□□ -1.08
PRPF40B-212ENST00000551111 OR52E5Q8NH55 327 aa8.29□□□□□ -1.08
PRPF40B-212ENST00000551111 Q8WTZ3 238 aa8.29□□□□□ -1.08
PRPF40B-212ENST00000551111 RBPMSQ93062 196 aaKnown RBP8.29□□□□□ -1.08
PRPF40B-212ENST00000551111 ACY3Q96HD9 319 aa8.29□□□□□ -1.08
PRPF40B-212ENST00000551111 PLA2G2EQ9NZK7 142 aa8.29□□□□□ -1.08
PRPF40B-212ENST00000551111 GPR132Q9UNW8 380 aa8.29□□□□□ -1.08
PRPF40B-212ENST00000551111 DNAH11Q96DT5 4516 aa8.29□□□□□ -1.08
PRPF40B-212ENST00000551111 TRAV30A0A087WSZ9 112 aa8.28□□□□□ -1.08
PRPF40B-212ENST00000551111 DEFB131BA0A096LNP1 70 aa8.28□□□□□ -1.08
PRPF40B-212ENST00000551111 CRYM-AS1A6NIL9 109 aa8.28□□□□□ -1.08
PRPF40B-212ENST00000551111 CEBPZOSA8MTT3 80 aa8.28□□□□□ -1.08
PRPF40B-212ENST00000551111 M0R2N4 97 aa8.28□□□□□ -1.08
PRPF40B-212ENST00000551111 BUB3O43684 328 aa8.28□□□□□ -1.08
PRPF40B-212ENST00000551111 ATG12O94817 140 aa8.28□□□□□ -1.08
PRPF40B-212ENST00000551111 IGKV3-20P01619 116 aa8.28□□□□□ -1.08
PRPF40B-212ENST00000551111 PSG1P11464 419 aa8.28□□□□□ -1.08
PRPF40B-212ENST00000551111 SPCS2Q15005 226 aa8.28□□□□□ -1.08
PRPF40B-212ENST00000551111 SLC24A4Q8NFF2 622 aa8.28□□□□□ -1.08
PRPF40B-212ENST00000551111 OR51G1Q8NGK1 321 aa8.28□□□□□ -1.08
PRPF40B-212ENST00000551111 OR4C16Q8NGL9 310 aa8.28□□□□□ -1.08
PRPF40B-212ENST00000551111 WDR12Q9GZL7 423 aaKnown RBP8.28□□□□□ -1.08
PRPF40B-212ENST00000551111 GABARAPH6UMI1 98 aa8.27□□□□□ -1.09
PRPF40B-212ENST00000551111 RTL8CO15255 209 aa8.27□□□□□ -1.09
PRPF40B-212ENST00000551111 TMEM41BQ5BJD5 291 aa8.27□□□□□ -1.09
PRPF40B-212ENST00000551111 FAM219AQ8IW50 185 aa8.27□□□□□ -1.09
PRPF40B-212ENST00000551111 RNASEH2CQ8TDP1 164 aaKnown RBP8.27□□□□□ -1.09
PRPF40B-212ENST00000551111 NARS2Q96I59 477 aaKnown RBP8.27□□□□□ -1.09
PRPF40B-212ENST00000551111 RNF126Q9BV68 326 aa8.27□□□□□ -1.09
PRPF40B-212ENST00000551111 C14orf166Q9Y224 244 aaKnown RBP8.27□□□□□ -1.09
PRPF40B-212ENST00000551111 TMEM56-RWDD3S4R434 201 aa8.27□□□□□ -1.09
PRPF40B-212ENST00000551111 IGKV1D-37A0A075B6S9 117 aa8.26□□□□□ -1.09
PRPF40B-212ENST00000551111 RPS10-NUDT3A0A1W2PQS6 291 aa8.26□□□□□ -1.09
PRPF40B-212ENST00000551111 RGS5O15539 181 aa8.26□□□□□ -1.09
PRPF40B-212ENST00000551111 TOMM40O96008 361 aa8.26□□□□□ -1.09
PRPF40B-212ENST00000551111 RD3LP0DJH9 198 aa8.26□□□□□ -1.09
PRPF40B-212ENST00000551111 SLC25A4P12235 298 aa8.26□□□□□ -1.09
PRPF40B-212ENST00000551111 NPY1RP25929 384 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 796.7 ms