RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 CX3CL1P78423 397 aa10.04□□□□□ -0.8
NR4A1-215ENST00000550557 SCGB1D4Q6XE38 83 aa10.04□□□□□ -0.8
NR4A1-215ENST00000550557 MYOZ3Q8TDC0 251 aa10.04□□□□□ -0.8
NR4A1-215ENST00000550557 WFDC1Q9HC57 220 aa10.04□□□□□ -0.8
NR4A1-215ENST00000550557 ALPK3Q96L96 1907 aa10.04□□□□□ -0.8
NR4A1-215ENST00000550557 TMEM250H0YL14 139 aa10.04□□□□□ -0.8
NR4A1-215ENST00000550557 UCP1P25874 307 aa10.04□□□□□ -0.8
NR4A1-215ENST00000550557 RUSC1-AS1Q66K80 236 aa10.04□□□□□ -0.8
NR4A1-215ENST00000550557 LCNL1Q6ZST4 164 aa10.04□□□□□ -0.8
NR4A1-215ENST00000550557 TRBV9A0A0B4J1U6 114 aa10.04□□□□□ -0.8
NR4A1-215ENST00000550557 NPIPB6E9PJ23 425 aa10.04□□□□□ -0.8
NR4A1-215ENST00000550557 HOXA5P20719 270 aa10.04□□□□□ -0.8
NR4A1-215ENST00000550557 CYP2G1PQ6ZSU1 146 aa10.04□□□□□ -0.8
NR4A1-215ENST00000550557 LYL1P12980 280 aa10.03□□□□□ -0.8
NR4A1-215ENST00000550557 RNASEH2CQ8TDP1 164 aaKnown RBP10.03□□□□□ -0.8
NR4A1-215ENST00000550557 LINC01587Q99440 93 aa10.03□□□□□ -0.8
NR4A1-215ENST00000550557 AURKAIP1Q9NWT8 199 aaPredicted RBP10.03□□□□□ -0.8
NR4A1-215ENST00000550557 PTPRSQ13332 1948 aa10.03□□□□□ -0.8
NR4A1-215ENST00000550557 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.03□□□□□ -0.8
NR4A1-215ENST00000550557 C5orf52A6NGY3 159 aa10.03□□□□□ -0.8
NR4A1-215ENST00000550557 ZNF600Q6ZNG1 722 aa10.03□□□□□ -0.8
NR4A1-215ENST00000550557 IL17RELQ6ZVW7 336 aa10.03□□□□□ -0.8
NR4A1-215ENST00000550557 PIP4P2Q8N4L2 257 aa10.03□□□□□ -0.8
NR4A1-215ENST00000550557 IGHV1-69DA0A0B4J2H0 117 aa10.03□□□□□ -0.8
NR4A1-215ENST00000550557 IGHV1-69P01742 117 aa10.03□□□□□ -0.8
NR4A1-215ENST00000550557 SOD3P08294 240 aa10.03□□□□□ -0.8
NR4A1-215ENST00000550557 GCSHP23434 173 aa10.03□□□□□ -0.8
NR4A1-215ENST00000550557 DUX3Q96PT4 197 aa10.03□□□□□ -0.8
NR4A1-215ENST00000550557 RPRMQ9NS64 109 aa10.03□□□□□ -0.8
NR4A1-215ENST00000550557 NAV2Q8IVL1 2488 aa10.03□□□□□ -0.8
NR4A1-215ENST00000550557 IGKV1-27A0A075B6S5 117 aa10.03□□□□□ -0.8
NR4A1-215ENST00000550557 FOXI3A8MTJ6 420 aaPredicted RBP10.03□□□□□ -0.8
NR4A1-215ENST00000550557 LINC00305Q7Z4B0 112 aa10.03□□□□□ -0.8
NR4A1-215ENST00000550557 NDUFB4O95168 129 aa10.02□□□□□ -0.8
NR4A1-215ENST00000550557 UBE2E1P51965 193 aa10.02□□□□□ -0.8
NR4A1-215ENST00000550557 ZNF585BQ52M93 769 aa10.02□□□□□ -0.8
NR4A1-215ENST00000550557 TMEM42Q69YG0 159 aa10.02□□□□□ -0.8
NR4A1-215ENST00000550557 RNF166Q96A37 237 aaPredicted RBP10.02□□□□□ -0.8
NR4A1-215ENST00000550557 RBFOX2O43251 390 aaKnown RBP eCLIP10.02□□□□□ -0.81
NR4A1-215ENST00000550557 CMC4P56277 68 aaPredicted RBP10.02□□□□□ -0.81
NR4A1-215ENST00000550557 PAX8Q06710 450 aa10.02□□□□□ -0.81
NR4A1-215ENST00000550557 CACNG8Q8WXS5 425 aa10.02□□□□□ -0.81
NR4A1-215ENST00000550557 UQCR10Q9UDW1 63 aa10.02□□□□□ -0.81
NR4A1-215ENST00000550557 IGKV1D-17A0A075B6S4 117 aa10.02□□□□□ -0.81
NR4A1-215ENST00000550557 BUB1B-PAK6H3BSN5 160 aa10.02□□□□□ -0.81
NR4A1-215ENST00000550557 HSPB9Q9BQS6 159 aa10.02□□□□□ -0.81
NR4A1-215ENST00000550557 NDUFS7O75251 213 aa10.02□□□□□ -0.81
NR4A1-215ENST00000550557 VENTXO95231 258 aa10.02□□□□□ -0.81
NR4A1-215ENST00000550557 DUTP33316 252 aaKnown RBP10.02□□□□□ -0.81
NR4A1-215ENST00000550557 IBA57Q5T440 356 aaKnown RBP10.02□□□□□ -0.81
NR4A1-215ENST00000550557 LRTM2Q8N967 370 aa10.02□□□□□ -0.81
NR4A1-215ENST00000550557 TMEM167AQ8TBQ9 72 aa10.02□□□□□ -0.81
NR4A1-215ENST00000550557 RNF5Q99942 180 aa10.02□□□□□ -0.81
NR4A1-215ENST00000550557 SPOCK3Q9BQ16 436 aa10.02□□□□□ -0.81
NR4A1-215ENST00000550557 MRPL32Q9BYC8 188 aaKnown RBP10.02□□□□□ -0.81
NR4A1-215ENST00000550557 ADORA2A-AS1P86434 159 aa10.01□□□□□ -0.81
NR4A1-215ENST00000550557 SRSF7Q16629 238 aaKnown RBP eCLIP10.01□□□□□ -0.81
NR4A1-215ENST00000550557 IGHV2-70DA0A0C4DH43 119 aa10.01□□□□□ -0.81
NR4A1-215ENST00000550557 PSMB2P49721 201 aa10.01□□□□□ -0.81
NR4A1-215ENST00000550557 DLX1P56177 255 aa10.01□□□□□ -0.81
NR4A1-215ENST00000550557 ICAM4Q14773 271 aa10.01□□□□□ -0.81
NR4A1-215ENST00000550557 C5orf64Q2M2E5 130 aa10.01□□□□□ -0.81
NR4A1-215ENST00000550557 OR4D5Q8NGN0 318 aa10.01□□□□□ -0.81
NR4A1-215ENST00000550557 RCC1LQ96I51 464 aaKnown RBP10.01□□□□□ -0.81
NR4A1-215ENST00000550557 SPRY4Q9C004 299 aa10.01□□□□□ -0.81
NR4A1-215ENST00000550557 DCAF16Q9NXF7 216 aa10.01□□□□□ -0.81
NR4A1-215ENST00000550557 UTRNP46939 3433 aa10.01□□□□□ -0.81
NR4A1-215ENST00000550557 TRGV2A0A075B6R0 118 aa10.01□□□□□ -0.81
NR4A1-215ENST00000550557 MALRD1Q5VYJ5 2156 aa10.01□□□□□ -0.81
NR4A1-215ENST00000550557 C9JCJ5 164 aa10□□□□□ -0.81
NR4A1-215ENST00000550557 AREGP15514 252 aa10□□□□□ -0.81
NR4A1-215ENST00000550557 SRSF9Q13242 221 aaKnown RBP eCLIP10□□□□□ -0.81
NR4A1-215ENST00000550557 FAM74A4Q5TZK3 123 aa10□□□□□ -0.81
NR4A1-215ENST00000550557 TMEM183AQ8IXX5 376 aa10□□□□□ -0.81
NR4A1-215ENST00000550557 TMEM238LA0A1B0GVL6 79 aa10□□□□□ -0.81
NR4A1-215ENST00000550557 A6NJY4 79 aa10□□□□□ -0.81
NR4A1-215ENST00000550557 RPS20P60866 119 aaKnown RBP10□□□□□ -0.81
NR4A1-215ENST00000550557 TWIST1Q15672 202 aa10□□□□□ -0.81
NR4A1-215ENST00000550557 FAM110DQ8TAY7 271 aaPredicted RBP10□□□□□ -0.81
NR4A1-215ENST00000550557 RNF138Q8WVD3 245 aa10□□□□□ -0.81
NR4A1-215ENST00000550557 ZNF257Q9Y2Q1 563 aa10□□□□□ -0.81
NR4A1-215ENST00000550557 MST1LQ2TV78 715 aa10□□□□□ -0.81
NR4A1-215ENST00000550557 C15orf32Q32M92 178 aa10□□□□□ -0.81
NR4A1-215ENST00000550557 GOLT1AQ6ZVE7 132 aa10□□□□□ -0.81
NR4A1-215ENST00000550557 REC114Q7Z4M0 266 aa10□□□□□ -0.81
NR4A1-215ENST00000550557 C1orf147Q96MC9 270 aaPredicted RBP10□□□□□ -0.81
NR4A1-215ENST00000550557 PARLQ9H300 379 aa10□□□□□ -0.81
NR4A1-215ENST00000550557 IGKV1D-13A0A0B4J2D9 117 aa10□□□□□ -0.81
NR4A1-215ENST00000550557 IGKV1-13P0DP09 117 aa10□□□□□ -0.81
NR4A1-215ENST00000550557 ANOS1P23352 680 aa10□□□□□ -0.81
NR4A1-215ENST00000550557 ERASQ7Z444 233 aa9.99□□□□□ -0.81
NR4A1-215ENST00000550557 BTF3P20290 206 aaKnown RBP9.99□□□□□ -0.81
NR4A1-215ENST00000550557 PRSS8Q16651 343 aa9.99□□□□□ -0.81
NR4A1-215ENST00000550557 SLC25A48Q6ZT89 311 aaKnown RBP9.99□□□□□ -0.81
NR4A1-215ENST00000550557 TMEM70Q9BUB7 260 aa9.99□□□□□ -0.81
NR4A1-215ENST00000550557 AP5S1Q9NUS5 200 aa9.99□□□□□ -0.81
NR4A1-215ENST00000550557 C15orf61A6NNL5 157 aa9.99□□□□□ -0.81
NR4A1-215ENST00000550557 CCL20P78556 96 aa9.99□□□□□ -0.81
NR4A1-215ENST00000550557 FAM53AQ6NSI3 398 aaPredicted RBP9.99□□□□□ -0.81
NR4A1-215ENST00000550557 OR8A1Q8NGG7 326 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms