RNA–Protein interactions for RNA: ENST00000549139.5

CHMP1A-206, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-206ENST00000549139 JTBO76095 146 aa11.83□□□□□ -0.52
CHMP1A-206ENST00000549139 IGHV4-30-4P0DP06 118 aa11.83□□□□□ -0.52
CHMP1A-206ENST00000549139 ZNF431Q8TF32 576 aaPredicted RBP11.83□□□□□ -0.52
CHMP1A-206ENST00000549139 CACNG8Q8WXS5 425 aa11.83□□□□□ -0.52
CHMP1A-206ENST00000549139 OR10C1Q96KK4 312 aa11.83□□□□□ -0.52
CHMP1A-206ENST00000549139 MRPL36Q9P0J6 103 aaKnown RBP11.83□□□□□ -0.52
CHMP1A-206ENST00000549139 ZNF785A8K8V0 405 aa11.82□□□□□ -0.52
CHMP1A-206ENST00000549139 SCGB2A1O75556 95 aa11.82□□□□□ -0.52
CHMP1A-206ENST00000549139 PRSS54Q6PEW0 395 aa11.82□□□□□ -0.52
CHMP1A-206ENST00000549139 ZNF600Q6ZNG1 722 aa11.82□□□□□ -0.52
CHMP1A-206ENST00000549139 TMEM116Q8NCL8 245 aa11.82□□□□□ -0.52
CHMP1A-206ENST00000549139 OR4D5Q8NGN0 318 aa11.82□□□□□ -0.52
CHMP1A-206ENST00000549139 ENKURQ8TC29 256 aa11.82□□□□□ -0.52
CHMP1A-206ENST00000549139 C20orf24Q9BUV8 137 aa11.82□□□□□ -0.52
CHMP1A-206ENST00000549139 MLXQ9UH92 298 aa11.82□□□□□ -0.52
CHMP1A-206ENST00000549139 IFNA4P05014 189 aa11.81□□□□□ -0.52
CHMP1A-206ENST00000549139 IL5P05113 134 aa11.81□□□□□ -0.52
CHMP1A-206ENST00000549139 IAPPP10997 89 aa11.81□□□□□ -0.52
CHMP1A-206ENST00000549139 NKX2-1P43699 371 aaPredicted RBP11.81□□□□□ -0.52
CHMP1A-206ENST00000549139 RAB11AP62491 216 aa11.81□□□□□ -0.52
CHMP1A-206ENST00000549139 RPP30P78346 268 aaKnown RBP11.81□□□□□ -0.52
CHMP1A-206ENST00000549139 C12orf45Q8N5I9 185 aaPredicted RBP11.81□□□□□ -0.52
CHMP1A-206ENST00000549139 SEC22CQ9BRL7 303 aa11.81□□□□□ -0.52
CHMP1A-206ENST00000549139 MAGT1Q9H0U3 335 aa11.81□□□□□ -0.52
CHMP1A-206ENST00000549139 PCLOQ9Y6V0 5065 aa11.8□□□□□ -0.52
CHMP1A-206ENST00000549139 TRAV25A0A0B4J276 109 aa11.8□□□□□ -0.52
CHMP1A-206ENST00000549139 WRBO00258 174 aa11.8□□□□□ -0.52
CHMP1A-206ENST00000549139 YIF1AO95070 293 aa11.8□□□□□ -0.52
CHMP1A-206ENST00000549139 GPX4P36969 197 aaPredicted RBP11.8□□□□□ -0.52
CHMP1A-206ENST00000549139 RND2P52198 227 aa11.8□□□□□ -0.52
CHMP1A-206ENST00000549139 DEFA1P59665 94 aa11.8□□□□□ -0.52
CHMP1A-206ENST00000549139 DEFA3P59666 94 aa11.8□□□□□ -0.52
CHMP1A-206ENST00000549139 IAH1Q2TAA2 248 aaPredicted RBP11.8□□□□□ -0.52
CHMP1A-206ENST00000549139 TOMM20LQ6UXN7 152 aa11.8□□□□□ -0.52
CHMP1A-206ENST00000549139 NRARPQ7Z6K4 114 aa11.8□□□□□ -0.52
CHMP1A-206ENST00000549139 IGHV3OR16-8A0A075B7F1 116 aa11.79□□□□□ -0.52
CHMP1A-206ENST00000549139 TRAV14DV4A0A0A6YYC5 116 aa11.79□□□□□ -0.52
CHMP1A-206ENST00000549139 IGKV1-17P01599 117 aa11.79□□□□□ -0.52
CHMP1A-206ENST00000549139 IGLC1P0CG04 106 aa11.79□□□□□ -0.52
CHMP1A-206ENST00000549139 POLR2GP62487 172 aaKnown RBP eCLIP11.79□□□□□ -0.52
CHMP1A-206ENST00000549139 BTNL8Q6UX41 500 aa11.79□□□□□ -0.52
CHMP1A-206ENST00000549139 GTSCR1Q86UQ5 136 aa11.79□□□□□ -0.52
CHMP1A-206ENST00000549139 TMEM61Q8N0U2 210 aa11.79□□□□□ -0.52
CHMP1A-206ENST00000549139 ZBTB8BQ8NAP8 495 aaPredicted RBP11.79□□□□□ -0.52
CHMP1A-206ENST00000549139 OR1S2Q8NGQ3 325 aa11.79□□□□□ -0.52
CHMP1A-206ENST00000549139 NPIPB3Q92617 1050 aa11.79□□□□□ -0.52
CHMP1A-206ENST00000549139 SPATA25Q9BR10 227 aa11.79□□□□□ -0.52
CHMP1A-206ENST00000549139 GINS3Q9BRX5 216 aa11.79□□□□□ -0.52
CHMP1A-206ENST00000549139 ZFAND3Q9H8U3 227 aa11.79□□□□□ -0.52
CHMP1A-206ENST00000549139 SMPXQ9UHP9 88 aa11.79□□□□□ -0.52
CHMP1A-206ENST00000549139 PUS1Q9Y606 427 aaKnown RBP eCLIP11.79□□□□□ -0.52
CHMP1A-206ENST00000549139 IGHV7-4-1A0A0J9YVY3 117 aa11.78□□□□□ -0.52
CHMP1A-206ENST00000549139 ZNF207O43670 478 aaKnown RBP11.78□□□□□ -0.52
CHMP1A-206ENST00000549139 YPEL3P61236 119 aaPredicted RBP11.78□□□□□ -0.52
CHMP1A-206ENST00000549139 GUCA2BQ16661 112 aa11.78□□□□□ -0.52
CHMP1A-206ENST00000549139 TIGITQ495A1 244 aa11.78□□□□□ -0.52
CHMP1A-206ENST00000549139 RBPMS2Q6ZRY4 209 aaKnown RBP11.78□□□□□ -0.52
CHMP1A-206ENST00000549139 SLC16A13Q7RTY0 426 aa11.78□□□□□ -0.52
CHMP1A-206ENST00000549139 WDR89Q96FK6 387 aaPredicted RBP11.78□□□□□ -0.52
CHMP1A-206ENST00000549139 SMIM8Q96KF7 97 aa11.78□□□□□ -0.52
CHMP1A-206ENST00000549139 GPN1Q9HCN4 374 aaPredicted RBP11.78□□□□□ -0.52
CHMP1A-206ENST00000549139 CHEK1O14757 476 aa11.77□□□□□ -0.53
CHMP1A-206ENST00000549139 OR10J1P30954 320 aa11.77□□□□□ -0.53
CHMP1A-206ENST00000549139 GAMTQ14353 236 aa11.77□□□□□ -0.53
CHMP1A-206ENST00000549139 HAGHQ16775 308 aa11.77□□□□□ -0.53
CHMP1A-206ENST00000549139 SPANXN5Q5MJ07 72 aa11.77□□□□□ -0.53
CHMP1A-206ENST00000549139 LAMTOR1Q6IAA8 161 aa11.77□□□□□ -0.53
CHMP1A-206ENST00000549139 Q8WTZ3 238 aa11.77□□□□□ -0.53
CHMP1A-206ENST00000549139 MARVELD1Q9BSK0 173 aa11.77□□□□□ -0.53
CHMP1A-206ENST00000549139 PSENENQ9NZ42 101 aa11.77□□□□□ -0.53
CHMP1A-206ENST00000549139 GSKIPQ9P0R6 139 aa11.77□□□□□ -0.53
CHMP1A-206ENST00000549139 STRAPQ9Y3F4 350 aaKnown RBP11.77□□□□□ -0.53
CHMP1A-206ENST00000549139 SELENOKQ9Y6D0 94 aa11.77□□□□□ -0.53
CHMP1A-206ENST00000549139 RYR1P21817 5038 aa11.76□□□□□ -0.53
CHMP1A-206ENST00000549139 INMT-MINDY4F8WBC2 141 aa11.76□□□□□ -0.53
CHMP1A-206ENST00000549139 CCSO14618 274 aa11.76□□□□□ -0.53
CHMP1A-206ENST00000549139 TSPAN4O14817 238 aa11.76□□□□□ -0.53
CHMP1A-206ENST00000549139 PRAF2O60831 178 aa11.76□□□□□ -0.53
CHMP1A-206ENST00000549139 ACY3Q96HD9 319 aa11.76□□□□□ -0.53
CHMP1A-206ENST00000549139 SLC35E1Q96K37 410 aa11.76□□□□□ -0.53
CHMP1A-206ENST00000549139 C2orf50Q96LR7 162 aa11.76□□□□□ -0.53
CHMP1A-206ENST00000549139 RAB40CQ96S21 281 aa11.76□□□□□ -0.53
CHMP1A-206ENST00000549139 RHPN1-AS1Q9BWJ2 59 aa11.76□□□□□ -0.53
CHMP1A-206ENST00000549139 PAIP2BQ9ULR5 123 aaKnown RBP11.76□□□□□ -0.53
CHMP1A-206ENST00000549139 KMT2AQ03164 3969 aa11.76□□□□□ -0.53
CHMP1A-206ENST00000549139 C5orf51A6NDU8 294 aa11.75□□□□□ -0.53
CHMP1A-206ENST00000549139 SNRPGP15A8MWD9 76 aa11.75□□□□□ -0.53
CHMP1A-206ENST00000549139 PRSS46E5RG02 174 aa11.75□□□□□ -0.53
CHMP1A-206ENST00000549139 SCAF4O95104 1147 aaKnown RBP11.75□□□□□ -0.53
CHMP1A-206ENST00000549139 NPPCP23582 126 aa11.75□□□□□ -0.53
CHMP1A-206ENST00000549139 BMI1P35226 326 aa11.75□□□□□ -0.53
CHMP1A-206ENST00000549139 PAX9P55771 341 aa11.75□□□□□ -0.53
CHMP1A-206ENST00000549139 TAS2R30P59541 319 aa11.75□□□□□ -0.53
CHMP1A-206ENST00000549139 CD81P60033 236 aa11.75□□□□□ -0.53
CHMP1A-206ENST00000549139 SPAG8Q99932 426 aaPredicted RBP11.75□□□□□ -0.53
CHMP1A-206ENST00000549139 NEURL2Q9BR09 285 aa11.75□□□□□ -0.53
CHMP1A-206ENST00000549139 VSIRQ9H7M9 311 aa11.75□□□□□ -0.53
CHMP1A-206ENST00000549139 DNAH10Q8IVF4 4471 aa11.74□□□□□ -0.53
CHMP1A-206ENST00000549139 FAM25EA8MYX2 175 aa11.74□□□□□ -0.53
CHMP1A-206ENST00000549139 SSSCA1O60232 199 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms