RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 NUDT11Q96G61 164 aa11.1□□□□□ -0.63
VPS33A-208ENST00000543633 RBM14Q96PK6 669 aaKnown RBP11.1□□□□□ -0.63
VPS33A-208ENST00000543633 C1RLQ9NZP8 487 aa11.1□□□□□ -0.63
VPS33A-208ENST00000543633 LAMTOR2Q9Y2Q5 125 aa11.1□□□□□ -0.63
VPS33A-208ENST00000543633 KLF12Q9Y4X4 402 aa11.1□□□□□ -0.63
VPS33A-208ENST00000543633 TRAV5A0A0B4J249 113 aa11.09□□□□□ -0.63
VPS33A-208ENST00000543633 HSBP1O75506 76 aa11.09□□□□□ -0.63
VPS33A-208ENST00000543633 CHRNB4P30926 498 aa11.09□□□□□ -0.63
VPS33A-208ENST00000543633 PVRIGQ6DKI7 326 aa11.09□□□□□ -0.63
VPS33A-208ENST00000543633 ETFRF1Q6IPR1 90 aa11.09□□□□□ -0.63
VPS33A-208ENST00000543633 VHLLQ6RSH7 139 aa11.09□□□□□ -0.63
VPS33A-208ENST00000543633 Q6ZN92 141 aa11.09□□□□□ -0.63
VPS33A-208ENST00000543633 OR8B3Q8NGG8 313 aa11.09□□□□□ -0.63
VPS33A-208ENST00000543633 OR10X1Q8NGY0 326 aa11.09□□□□□ -0.63
VPS33A-208ENST00000543633 TMEM186Q96B77 213 aa11.09□□□□□ -0.63
VPS33A-208ENST00000543633 PERPQ96FX8 193 aa11.09□□□□□ -0.63
VPS33A-208ENST00000543633 OR8B2Q96RD0 313 aa11.09□□□□□ -0.63
VPS33A-208ENST00000543633 ALKBH7Q9BT30 221 aaPredicted RBP11.09□□□□□ -0.63
VPS33A-208ENST00000543633 ZNF492Q9P255 531 aa11.09□□□□□ -0.63
VPS33A-208ENST00000543633 IGKV1D-37A0A075B6S9 117 aa11.09□□□□□ -0.63
VPS33A-208ENST00000543633 TNFRSF1AP19438 455 aa11.09□□□□□ -0.63
VPS33A-208ENST00000543633 ZNF137PP52743 207 aa11.09□□□□□ -0.63
VPS33A-208ENST00000543633 PAX2Q02962 417 aa11.09□□□□□ -0.63
VPS33A-208ENST00000543633 BATFQ16520 125 aa11.09□□□□□ -0.63
VPS33A-208ENST00000543633 MLANAQ16655 118 aa11.09□□□□□ -0.63
VPS33A-208ENST00000543633 PATE2Q6UY27 113 aa11.09□□□□□ -0.63
VPS33A-208ENST00000543633 OR2T6Q8NHC8 308 aa11.09□□□□□ -0.63
VPS33A-208ENST00000543633 ORAOV1Q8WV07 137 aa11.09□□□□□ -0.63
VPS33A-208ENST00000543633 RND1Q92730 232 aa11.09□□□□□ -0.63
VPS33A-208ENST00000543633 TRAV9-2A0A087WT02 112 aa11.08□□□□□ -0.64
VPS33A-208ENST00000543633 FAM181BA6NEQ2 426 aa11.08□□□□□ -0.64
VPS33A-208ENST00000543633 PYYP10082 97 aa11.08□□□□□ -0.64
VPS33A-208ENST00000543633 UBE2G1P62253 170 aa11.08□□□□□ -0.64
VPS33A-208ENST00000543633 C1orf185Q5T7R7 199 aa11.08□□□□□ -0.64
VPS33A-208ENST00000543633 ZCCHC24Q8N2G6 241 aaKnown RBP11.08□□□□□ -0.64
VPS33A-208ENST00000543633 FAM168AQ92567 244 aa11.08□□□□□ -0.64
VPS33A-208ENST00000543633 CLEC7AQ9BXN2 247 aa11.08□□□□□ -0.64
VPS33A-208ENST00000543633 FNDC4Q9H6D8 234 aaPredicted RBP11.08□□□□□ -0.64
VPS33A-208ENST00000543633 IGHV2-26A0A0B4J1V2 119 aa11.08□□□□□ -0.64
VPS33A-208ENST00000543633 CA1P00915 261 aaPredicted RBP11.08□□□□□ -0.64
VPS33A-208ENST00000543633 SFTPCP11686 197 aa11.08□□□□□ -0.64
VPS33A-208ENST00000543633 NTF3P20783 257 aa11.08□□□□□ -0.64
VPS33A-208ENST00000543633 ZADH2Q8N4Q0 377 aa11.08□□□□□ -0.64
VPS33A-208ENST00000543633 RBMXL3Q8N7X1 1067 aaKnown RBP11.08□□□□□ -0.64
VPS33A-208ENST00000543633 DEFB108BQ8NET1 73 aa11.08□□□□□ -0.64
VPS33A-208ENST00000543633 NPIPB3Q92617 1050 aa11.08□□□□□ -0.64
VPS33A-208ENST00000543633 SSBP3Q9BWW4 388 aaPredicted RBP11.08□□□□□ -0.64
VPS33A-208ENST00000543633 TNFRSF19Q9NS68 423 aa11.08□□□□□ -0.64
VPS33A-208ENST00000543633 EPDR1Q9UM22 224 aa11.08□□□□□ -0.64
VPS33A-208ENST00000543633 SSUH2Q9Y2M2 353 aa11.08□□□□□ -0.64
VPS33A-208ENST00000543633 WASHC3Q9Y3C0 194 aa11.08□□□□□ -0.64
VPS33A-208ENST00000543633 CBY1Q9Y3M2 126 aa11.08□□□□□ -0.64
VPS33A-208ENST00000543633 CGB1A6NKQ9 187 aa11.07□□□□□ -0.64
VPS33A-208ENST00000543633 M0R2Z0 102 aa11.07□□□□□ -0.64
VPS33A-208ENST00000543633 CRYGCP07315 174 aa11.07□□□□□ -0.64
VPS33A-208ENST00000543633 WT1-ASQ06250 92 aa11.07□□□□□ -0.64
VPS33A-208ENST00000543633 MMDQ15546 238 aa11.07□□□□□ -0.64
VPS33A-208ENST00000543633 VMA21Q3ZAQ7 101 aa11.07□□□□□ -0.64
VPS33A-208ENST00000543633 GDF5OSQ5U4N7 250 aa11.07□□□□□ -0.64
VPS33A-208ENST00000543633 FAM19A2Q8N3H0 131 aa11.07□□□□□ -0.64
VPS33A-208ENST00000543633 NHLRC2Q8NBF2 726 aa11.07□□□□□ -0.64
VPS33A-208ENST00000543633 FMC1Q96HJ9 113 aa11.07□□□□□ -0.64
VPS33A-208ENST00000543633 GPR82Q96P67 336 aa11.07□□□□□ -0.64
VPS33A-208ENST00000543633 TRGV9Q99603 122 aa11.07□□□□□ -0.64
VPS33A-208ENST00000543633 GFRA4Q9GZZ7 299 aa11.07□□□□□ -0.64
VPS33A-208ENST00000543633 DCAF16Q9NXF7 216 aa11.07□□□□□ -0.64
VPS33A-208ENST00000543633 FAM215AQ9Y5M1 114 aa11.07□□□□□ -0.64
VPS33A-208ENST00000543633 DYSFO75923 2080 aa11.06□□□□□ -0.64
VPS33A-208ENST00000543633 FAM231BA6NCW3 169 aa11.06□□□□□ -0.64
VPS33A-208ENST00000543633 HIGD1CA8MV81 97 aa11.06□□□□□ -0.64
VPS33A-208ENST00000543633 IGLV2-23P01705 113 aa11.06□□□□□ -0.64
VPS33A-208ENST00000543633 CD40P25942 277 aa11.06□□□□□ -0.64
VPS33A-208ENST00000543633 TSPOP30536 169 aa11.06□□□□□ -0.64
VPS33A-208ENST00000543633 HBBP68871 147 aa11.06□□□□□ -0.64
VPS33A-208ENST00000543633 TNXAQ16473 311 aa11.06□□□□□ -0.64
VPS33A-208ENST00000543633 C11orf42Q8N5U0 333 aa11.06□□□□□ -0.64
VPS33A-208ENST00000543633 LINC00479Q96M42 142 aa11.06□□□□□ -0.64
VPS33A-208ENST00000543633 MLST8Q9BVC4 326 aa11.06□□□□□ -0.64
VPS33A-208ENST00000543633 RPP21Q9H633 154 aaKnown RBP11.06□□□□□ -0.64
VPS33A-208ENST00000543633 A8MWL6 223 aa11.06□□□□□ -0.64
VPS33A-208ENST00000543633 TOMM40O96008 361 aa11.06□□□□□ -0.64
VPS33A-208ENST00000543633 SSBP2P81877 361 aaPredicted RBP11.06□□□□□ -0.64
VPS33A-208ENST00000543633 IGFL3Q6UXB1 125 aa11.06□□□□□ -0.64
VPS33A-208ENST00000543633 LINC00305Q7Z4B0 112 aa11.06□□□□□ -0.64
VPS33A-208ENST00000543633 C5orf17Q8NAS9 161 aa11.06□□□□□ -0.64
VPS33A-208ENST00000543633 C22orf15Q8WYQ4 148 aa11.06□□□□□ -0.64
VPS33A-208ENST00000543633 ST6GALNAC6Q969X2 333 aa11.06□□□□□ -0.64
VPS33A-208ENST00000543633 CHCHD1Q96BP2 118 aaKnown RBP11.06□□□□□ -0.64
VPS33A-208ENST00000543633 PRSS22Q9GZN4 317 aa11.06□□□□□ -0.64
VPS33A-208ENST00000543633 ZNRD1Q9P1U0 126 aa11.06□□□□□ -0.64
VPS33A-208ENST00000543633 C2orf70A6NJV1 201 aa11.05□□□□□ -0.64
VPS33A-208ENST00000543633 SLC25A5P05141 298 aaKnown RBP11.05□□□□□ -0.64
VPS33A-208ENST00000543633 CEACAM8P31997 349 aaPredicted RBP11.05□□□□□ -0.64
VPS33A-208ENST00000543633 MC5RP33032 325 aa11.05□□□□□ -0.64
VPS33A-208ENST00000543633 PLP1P60201 277 aa11.05□□□□□ -0.64
VPS33A-208ENST00000543633 STPG4Q8N801 248 aa11.05□□□□□ -0.64
VPS33A-208ENST00000543633 TNCP24821 2201 aa11.05□□□□□ -0.64
VPS33A-208ENST00000543633 CORTO00230 105 aa11.04□□□□□ -0.64
VPS33A-208ENST00000543633 CRXO43186 299 aaPredicted RBP11.04□□□□□ -0.64
VPS33A-208ENST00000543633 SIAH2O43255 324 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms