RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 TRAV4A0A0B4J268 109 aa2.73□□□□□ -1.97
AC055720.1-201ENST00000539552 A0A0J9YXY3 114 aa2.73□□□□□ -1.97
AC055720.1-201ENST00000539552 TMEM269A0A1B0GVZ9 245 aa2.73□□□□□ -1.97
AC055720.1-201ENST00000539552 C4orf51C9J302 202 aa2.73□□□□□ -1.97
AC055720.1-201ENST00000539552 C9JQL5 133 aa2.73□□□□□ -1.97
AC055720.1-201ENST00000539552 PIRO00625 290 aa2.73□□□□□ -1.97
AC055720.1-201ENST00000539552 BANF1O75531 89 aa2.73□□□□□ -1.97
AC055720.1-201ENST00000539552 FSTL3O95633 263 aa2.73□□□□□ -1.97
AC055720.1-201ENST00000539552 IGF2P01344 180 aa2.73□□□□□ -1.97
AC055720.1-201ENST00000539552 IFNA7P01567 189 aa2.73□□□□□ -1.97
AC055720.1-201ENST00000539552 TSPAN19P0C672 248 aa2.73□□□□□ -1.97
AC055720.1-201ENST00000539552 HLA-EP13747 358 aa2.73□□□□□ -1.97
AC055720.1-201ENST00000539552 ZNF25P17030 456 aaPredicted RBP2.73□□□□□ -1.97
AC055720.1-201ENST00000539552 NPY1RP25929 384 aa2.73□□□□□ -1.97
AC055720.1-201ENST00000539552 ATP5G3P48201 142 aa2.73□□□□□ -1.97
AC055720.1-201ENST00000539552 DEFA1P59665 94 aa2.73□□□□□ -1.97
AC055720.1-201ENST00000539552 GABARAPL2P60520 117 aa2.73□□□□□ -1.97
AC055720.1-201ENST00000539552 TIMM10P62072 90 aa2.73□□□□□ -1.97
AC055720.1-201ENST00000539552 SELENOWP63302 87 aa2.73□□□□□ -1.97
AC055720.1-201ENST00000539552 ELF3P78545 371 aaPredicted RBP2.73□□□□□ -1.97
AC055720.1-201ENST00000539552 ENDOGQ14249 297 aaKnown RBP2.73□□□□□ -1.97
AC055720.1-201ENST00000539552 ELOCQ15369 112 aa2.73□□□□□ -1.97
AC055720.1-201ENST00000539552 RHEBQ15382 184 aa2.73□□□□□ -1.97
AC055720.1-201ENST00000539552 RNASE10Q5GAN6 216 aaKnown RBP2.73□□□□□ -1.97
AC055720.1-201ENST00000539552 RNF165Q6ZSG1 346 aa2.73□□□□□ -1.97
AC055720.1-201ENST00000539552 ZNF429Q86V71 674 aa2.73□□□□□ -1.97
AC055720.1-201ENST00000539552 SLC30A7Q8NEW0 376 aa2.73□□□□□ -1.97
AC055720.1-201ENST00000539552 OR2M3Q8NG83 312 aa2.73□□□□□ -1.97
AC055720.1-201ENST00000539552 OR13C8Q8NGS7 320 aa2.73□□□□□ -1.97
AC055720.1-201ENST00000539552 MS4A6EQ96DS6 147 aa2.73□□□□□ -1.97
AC055720.1-201ENST00000539552 ABHD14BQ96IU4 210 aa2.73□□□□□ -1.97
AC055720.1-201ENST00000539552 MED28Q9H204 178 aa2.73□□□□□ -1.97
AC055720.1-201ENST00000539552 POPDC3Q9HBV1 291 aa2.73□□□□□ -1.97
AC055720.1-201ENST00000539552 KCNIP2Q9NS61 270 aa2.73□□□□□ -1.97
AC055720.1-201ENST00000539552 TAAR3PQ9P1P4 343 aa2.73□□□□□ -1.97
AC055720.1-201ENST00000539552 RPS6KB2Q9UBS0 482 aa2.73□□□□□ -1.97
AC055720.1-201ENST00000539552 BAZ2AQ9UIF9 1905 aaKnown RBP2.73□□□□□ -1.97
AC055720.1-201ENST00000539552 STAB2Q8WWQ8 2551 aa2.73□□□□□ -1.97
AC055720.1-201ENST00000539552 DOCK7Q96N67 2140 aa2.72□□□□□ -1.97
AC055720.1-201ENST00000539552 ABCA4P78363 2273 aa2.72□□□□□ -1.97
AC055720.1-201ENST00000539552 HRNRQ86YZ3 2850 aaPredicted RBP2.72□□□□□ -1.97
AC055720.1-201ENST00000539552 PTPRDP23468 1912 aa2.72□□□□□ -1.97
AC055720.1-201ENST00000539552 MEIKINA0A087WXM9 373 aa2.72□□□□□ -1.97
AC055720.1-201ENST00000539552 NKX2-6A6NCS4 301 aa2.72□□□□□ -1.97
AC055720.1-201ENST00000539552 B4DEV8 164 aa2.72□□□□□ -1.97
AC055720.1-201ENST00000539552 H7C423 109 aa2.72□□□□□ -1.97
AC055720.1-201ENST00000539552 K7ERU9 68 aa2.72□□□□□ -1.97
AC055720.1-201ENST00000539552 M0R381 172 aa2.72□□□□□ -1.97
AC055720.1-201ENST00000539552 GSTZ1O43708 216 aaPredicted RBP2.72□□□□□ -1.97
AC055720.1-201ENST00000539552 ZNF354AO60765 605 aaPredicted RBP2.72□□□□□ -1.97
AC055720.1-201ENST00000539552 SUPT7LO94864 414 aa2.72□□□□□ -1.97
AC055720.1-201ENST00000539552 LTAP01374 205 aa2.72□□□□□ -1.97
AC055720.1-201ENST00000539552 IGLV3-27P01718 113 aa2.72□□□□□ -1.97
AC055720.1-201ENST00000539552 EVI2AP22794 236 aa2.72□□□□□ -1.97
AC055720.1-201ENST00000539552 SRIP30626 198 aa2.72□□□□□ -1.97
AC055720.1-201ENST00000539552 PPP1CCP36873 323 aaKnown RBP2.72□□□□□ -1.97
AC055720.1-201ENST00000539552 LINC00313P59037 77 aa2.72□□□□□ -1.97
AC055720.1-201ENST00000539552 GNA12Q03113 381 aa2.72□□□□□ -1.97
AC055720.1-201ENST00000539552 CST6Q15828 149 aa2.72□□□□□ -1.97
AC055720.1-201ENST00000539552 MRPL2Q5T653 305 aaKnown RBP2.72□□□□□ -1.97
AC055720.1-201ENST00000539552 EBLN2Q6P2I7 272 aa2.72□□□□□ -1.97
AC055720.1-201ENST00000539552 PRSS54Q6PEW0 395 aa2.72□□□□□ -1.97
AC055720.1-201ENST00000539552 ZNF613Q6PF04 617 aa2.72□□□□□ -1.97
AC055720.1-201ENST00000539552 CEMP1Q6PRD7 247 aaPredicted RBP2.72□□□□□ -1.97
AC055720.1-201ENST00000539552 Q6Q795 121 aa2.72□□□□□ -1.97
AC055720.1-201ENST00000539552 UNQ9165/PRO28630Q6UXU0 137 aa2.72□□□□□ -1.97
AC055720.1-201ENST00000539552 CAMK2N1Q7Z7J9 78 aa2.72□□□□□ -1.97
AC055720.1-201ENST00000539552 MARCH3Q86UD3 253 aa2.72□□□□□ -1.97
AC055720.1-201ENST00000539552 LRP11Q86VZ4 500 aa2.72□□□□□ -1.97
AC055720.1-201ENST00000539552 TMEM229BQ8NBD8 167 aa2.72□□□□□ -1.97
AC055720.1-201ENST00000539552 ACOT12Q8WYK0 555 aa2.72□□□□□ -1.97
AC055720.1-201ENST00000539552 SLC7A6Q92536 515 aa2.72□□□□□ -1.97
AC055720.1-201ENST00000539552 GNPNAT1Q96EK6 184 aaPredicted RBP2.72□□□□□ -1.97
AC055720.1-201ENST00000539552 C14orf144Q96I85 54 aa2.72□□□□□ -1.97
AC055720.1-201ENST00000539552 IGF2BP2-AS1Q96M15 143 aa2.72□□□□□ -1.97
AC055720.1-201ENST00000539552 OR2M2Q96R28 347 aa2.72□□□□□ -1.97
AC055720.1-201ENST00000539552 OR2A5Q96R48 311 aa2.72□□□□□ -1.97
AC055720.1-201ENST00000539552 LXNQ9BS40 222 aa2.72□□□□□ -1.97
AC055720.1-201ENST00000539552 MND1Q9BWT6 205 aa2.72□□□□□ -1.97
AC055720.1-201ENST00000539552 TVP23BQ9NYZ1 205 aa2.72□□□□□ -1.97
AC055720.1-201ENST00000539552 AK3Q9UIJ7 227 aa2.72□□□□□ -1.97
AC055720.1-201ENST00000539552 COQ4Q9Y3A0 265 aa2.72□□□□□ -1.97
AC055720.1-201ENST00000539552 HEY1Q9Y5J3 304 aa2.72□□□□□ -1.97
AC055720.1-201ENST00000539552 ZNF706Q9Y5V0 76 aaPredicted RBP2.72□□□□□ -1.97
AC055720.1-201ENST00000539552 AKAP6Q13023 2319 aa2.71□□□□□ -1.97
AC055720.1-201ENST00000539552 FOCADQ5VW36 1801 aa2.71□□□□□ -1.98
AC055720.1-201ENST00000539552 KIAA1549LQ6ZVL6 1849 aa2.71□□□□□ -1.98
AC055720.1-201ENST00000539552 A0A087WUU8 490 aa2.71□□□□□ -1.98
AC055720.1-201ENST00000539552 IGHV1-45A0A0A0MS14 117 aa2.71□□□□□ -1.98
AC055720.1-201ENST00000539552 PVALEFA0A1B0GWK0 134 aa2.71□□□□□ -1.98
AC055720.1-201ENST00000539552 DUXBA0A1W2PPF3 345 aa2.71□□□□□ -1.98
AC055720.1-201ENST00000539552 EPM2AB3EWF7 344 aa2.71□□□□□ -1.98
AC055720.1-201ENST00000539552 POP7O75817 140 aaKnown RBP2.71□□□□□ -1.98
AC055720.1-201ENST00000539552 CDS2O95674 445 aa2.71□□□□□ -1.98
AC055720.1-201ENST00000539552 IGLV2-23P01705 113 aa2.71□□□□□ -1.98
AC055720.1-201ENST00000539552 IFNA4P05014 189 aa2.71□□□□□ -1.98
AC055720.1-201ENST00000539552 S100A8P05109 93 aa2.71□□□□□ -1.98
AC055720.1-201ENST00000539552 HLA-DQB2P05538 268 aa2.71□□□□□ -1.98
AC055720.1-201ENST00000539552 SCTP09683 121 aa2.71□□□□□ -1.98
AC055720.1-201ENST00000539552 METTL15P1P0C7V9 234 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms