RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 HSPE1P61604 102 aaKnown RBP10.2□□□□□ -0.78
SFSWAP-208ENST00000539506 PRB3Q04118 309 aaPredicted RBP10.2□□□□□ -0.78
SFSWAP-208ENST00000539506 Q0VG73 95 aa10.2□□□□□ -0.78
SFSWAP-208ENST00000539506 GAGE1Q13065 139 aa10.2□□□□□ -0.78
SFSWAP-208ENST00000539506 BLNKQ8WV28 456 aa10.2□□□□□ -0.78
SFSWAP-208ENST00000539506 ZNF331Q9NQX6 463 aaPredicted RBP10.2□□□□□ -0.78
SFSWAP-208ENST00000539506 CHTOPQ9Y3Y2 248 aaKnown RBP10.2□□□□□ -0.78
SFSWAP-208ENST00000539506 DCHS2Q6V1P9 2916 aa10.19□□□□□ -0.78
SFSWAP-208ENST00000539506 CBY3A6NI87 242 aa10.19□□□□□ -0.78
SFSWAP-208ENST00000539506 LINC00614P0C842 121 aa10.19□□□□□ -0.78
SFSWAP-208ENST00000539506 GNB1LQ9BYB4 327 aa10.19□□□□□ -0.78
SFSWAP-208ENST00000539506 SLC45A2Q9UMX9 530 aa10.19□□□□□ -0.78
SFSWAP-208ENST00000539506 ZZEF1O43149 2961 aa10.19□□□□□ -0.78
SFSWAP-208ENST00000539506 hDV102S1A0JD36 115 aa10.19□□□□□ -0.78
SFSWAP-208ENST00000539506 IGLL1P15814 213 aa10.19□□□□□ -0.78
SFSWAP-208ENST00000539506 TSPOP30536 169 aa10.19□□□□□ -0.78
SFSWAP-208ENST00000539506 KIR2DS2P43631 304 aa10.19□□□□□ -0.78
SFSWAP-208ENST00000539506 PRRX1P54821 245 aa10.19□□□□□ -0.78
SFSWAP-208ENST00000539506 VAMP3Q15836 100 aa10.19□□□□□ -0.78
SFSWAP-208ENST00000539506 C3orf36Q3SXR2 165 aa10.19□□□□□ -0.78
SFSWAP-208ENST00000539506 ARL2-SNX15V9GYD0 113 aa10.19□□□□□ -0.78
SFSWAP-208ENST00000539506 J3QR06 171 aa10.18□□□□□ -0.78
SFSWAP-208ENST00000539506 RAB31Q13636 194 aa10.18□□□□□ -0.78
SFSWAP-208ENST00000539506 TCF24Q7RTU0 167 aa10.18□□□□□ -0.78
SFSWAP-208ENST00000539506 C18orf32Q8TCD1 76 aa10.18□□□□□ -0.78
SFSWAP-208ENST00000539506 LINC00574Q9H8X3 128 aa10.18□□□□□ -0.78
SFSWAP-208ENST00000539506 OR51B2Q9Y5P1 312 aa10.18□□□□□ -0.78
SFSWAP-208ENST00000539506 MT-CO2P00403 227 aa10.18□□□□□ -0.78
SFSWAP-208ENST00000539506 IGLV2-8P01709 118 aa10.18□□□□□ -0.78
SFSWAP-208ENST00000539506 C19orf35Q6ZS72 473 aa10.18□□□□□ -0.78
SFSWAP-208ENST00000539506 NEUROG1Q92886 237 aa10.18□□□□□ -0.78
SFSWAP-208ENST00000539506 OR8B2Q96RD0 313 aa10.18□□□□□ -0.78
SFSWAP-208ENST00000539506 REG1AP05451 166 aa10.18□□□□□ -0.78
SFSWAP-208ENST00000539506 ZNF841Q6ZN19 808 aa10.18□□□□□ -0.78
SFSWAP-208ENST00000539506 SLC25A48Q6ZT89 311 aaKnown RBP10.18□□□□□ -0.78
SFSWAP-208ENST00000539506 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.18□□□□□ -0.78
SFSWAP-208ENST00000539506 LRBAP50851 2863 aa10.17□□□□□ -0.78
SFSWAP-208ENST00000539506 UBE2L3P68036 154 aaKnown RBP10.17□□□□□ -0.78
SFSWAP-208ENST00000539506 PRR20EP86478 221 aa10.17□□□□□ -0.78
SFSWAP-208ENST00000539506 PRR20CP86479 221 aa10.17□□□□□ -0.78
SFSWAP-208ENST00000539506 PRR20DP86480 221 aa10.17□□□□□ -0.78
SFSWAP-208ENST00000539506 PRR20BP86481 221 aa10.17□□□□□ -0.78
SFSWAP-208ENST00000539506 PRR20AP86496 221 aa10.17□□□□□ -0.78
SFSWAP-208ENST00000539506 C10orf55Q5SWW7 151 aa10.17□□□□□ -0.78
SFSWAP-208ENST00000539506 SPACA3Q8IXA5 215 aa10.17□□□□□ -0.78
SFSWAP-208ENST00000539506 RPUSD1Q9UJJ7 312 aaKnown RBP10.17□□□□□ -0.78
SFSWAP-208ENST00000539506 E7EUB6 86 aa10.17□□□□□ -0.78
SFSWAP-208ENST00000539506 AMY1AP04745 511 aa10.17□□□□□ -0.78
SFSWAP-208ENST00000539506 CSN3P07498 182 aa10.17□□□□□ -0.78
SFSWAP-208ENST00000539506 ESDP10768 282 aa10.17□□□□□ -0.78
SFSWAP-208ENST00000539506 SELENOVP59797 346 aa10.17□□□□□ -0.78
SFSWAP-208ENST00000539506 Q71RC1 249 aaPredicted RBP10.17□□□□□ -0.78
SFSWAP-208ENST00000539506 FAM57AQ8TBR7 257 aa10.17□□□□□ -0.78
SFSWAP-208ENST00000539506 A0A0G2JNJ9 132 aa10.16□□□□□ -0.78
SFSWAP-208ENST00000539506 CCL3L1P16619 93 aa10.16□□□□□ -0.78
SFSWAP-208ENST00000539506 POU2AF1Q16633 256 aa10.16□□□□□ -0.78
SFSWAP-208ENST00000539506 MPV17L2Q567V2 206 aa10.16□□□□□ -0.78
SFSWAP-208ENST00000539506 TEX36Q5VZQ5 186 aa10.16□□□□□ -0.78
SFSWAP-208ENST00000539506 CORO2AQ92828 525 aa10.16□□□□□ -0.78
SFSWAP-208ENST00000539506 Q9UFV3 132 aa10.16□□□□□ -0.78
SFSWAP-208ENST00000539506 TEX50A0A1B0GTY4 177 aa10.16□□□□□ -0.78
SFSWAP-208ENST00000539506 VWC2LB2RUY7 222 aa10.16□□□□□ -0.78
SFSWAP-208ENST00000539506 ISLRO14498 428 aa10.16□□□□□ -0.78
SFSWAP-208ENST00000539506 KLK10O43240 276 aa10.16□□□□□ -0.78
SFSWAP-208ENST00000539506 CA7P43166 264 aa10.16□□□□□ -0.78
SFSWAP-208ENST00000539506 TCF15Q12870 199 aa10.16□□□□□ -0.78
SFSWAP-208ENST00000539506 DIAPH2-AS1Q14236 149 aa10.16□□□□□ -0.78
SFSWAP-208ENST00000539506 LEMD1Q68G75 181 aa10.16□□□□□ -0.78
SFSWAP-208ENST00000539506 OR4C5Q8NGB2 326 aa10.16□□□□□ -0.78
SFSWAP-208ENST00000539506 CUL9Q8IWT3 2517 aa10.16□□□□□ -0.78
SFSWAP-208ENST00000539506 UPK2O00526 184 aa10.16□□□□□ -0.78
SFSWAP-208ENST00000539506 FOXE3Q13461 319 aa10.16□□□□□ -0.78
SFSWAP-208ENST00000539506 ADIPOQQ15848 244 aa10.16□□□□□ -0.78
SFSWAP-208ENST00000539506 NUP35Q8NFH5 326 aa10.16□□□□□ -0.78
SFSWAP-208ENST00000539506 WASHC3Q9Y3C0 194 aa10.16□□□□□ -0.78
SFSWAP-208ENST00000539506 MED13LQ71F56 2210 aa10.15□□□□□ -0.78
SFSWAP-208ENST00000539506 CACNA1BQ00975 2339 aa10.15□□□□□ -0.78
SFSWAP-208ENST00000539506 THBDP07204 575 aa10.15□□□□□ -0.78
SFSWAP-208ENST00000539506 AREGP15514 252 aa10.15□□□□□ -0.78
SFSWAP-208ENST00000539506 RBX1P62877 108 aa10.15□□□□□ -0.78
SFSWAP-208ENST00000539506 ALKBH7Q9BT30 221 aaPredicted RBP10.15□□□□□ -0.78
SFSWAP-208ENST00000539506 FAM181BA6NEQ2 426 aa10.15□□□□□ -0.79
SFSWAP-208ENST00000539506 HIGD1CA8MV81 97 aa10.15□□□□□ -0.79
SFSWAP-208ENST00000539506 C9JCJ5 164 aa10.15□□□□□ -0.79
SFSWAP-208ENST00000539506 SAA1P0DJI8 122 aaPredicted RBP10.15□□□□□ -0.79
SFSWAP-208ENST00000539506 PRCDQ00LT1 54 aa10.15□□□□□ -0.79
SFSWAP-208ENST00000539506 NUDT10Q8NFP7 164 aa10.15□□□□□ -0.79
SFSWAP-208ENST00000539506 NUDT11Q96G61 164 aa10.15□□□□□ -0.79
SFSWAP-208ENST00000539506 LOC105371242A0A075B767 164 aa10.14□□□□□ -0.79
SFSWAP-208ENST00000539506 RUSC1-AS1Q66K80 236 aa10.14□□□□□ -0.79
SFSWAP-208ENST00000539506 WFDC8Q8IUA0 241 aa10.14□□□□□ -0.79
SFSWAP-208ENST00000539506 NUP37Q8NFH4 326 aa10.14□□□□□ -0.79
SFSWAP-208ENST00000539506 MRPL20Q9BYC9 149 aaKnown RBP10.14□□□□□ -0.79
SFSWAP-208ENST00000539506 BET1LQ9NYM9 111 aa10.14□□□□□ -0.79
SFSWAP-208ENST00000539506 ACACAQ13085 2346 aa10.14□□□□□ -0.79
SFSWAP-208ENST00000539506 ZGRF1Q86YA3 2104 aa10.14□□□□□ -0.79
SFSWAP-208ENST00000539506 ORM2P19652 201 aa10.14□□□□□ -0.79
SFSWAP-208ENST00000539506 WDR73Q6P4I2 378 aa10.14□□□□□ -0.79
SFSWAP-208ENST00000539506 C1orf122Q6ZSJ8 110 aa10.14□□□□□ -0.79
SFSWAP-208ENST00000539506 NAA38Q9BRA0 125 aaKnown RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms