RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 PTRHD1Q6GMV3 140 aaKnown RBP0.42□□□□□ -2.34
CCDC7-208ENST00000537047 SOSTDC1Q6X4U4 206 aa0.42□□□□□ -2.34
CCDC7-208ENST00000537047 BORCS5Q969J3 196 aa0.42□□□□□ -2.34
CCDC7-208ENST00000537047 ITFG2Q969R8 447 aa0.42□□□□□ -2.34
CCDC7-208ENST00000537047 C8orf76Q96K31 380 aa0.42□□□□□ -2.34
CCDC7-208ENST00000537047 CMSS1Q9BQ75 279 aaKnown RBP0.42□□□□□ -2.34
CCDC7-208ENST00000537047 LAMA4Q16363 1823 aa0.42□□□□□ -2.34
CCDC7-208ENST00000537047 NEO1Q92859 1461 aa0.41□□□□□ -2.34
CCDC7-208ENST00000537047 DOCK5Q9H7D0 1870 aa0.41□□□□□ -2.34
CCDC7-208ENST00000537047 FSIP2Q5CZC0 6907 aa0.41□□□□□ -2.34
CCDC7-208ENST00000537047 A0A087X0T9 212 aa0.41□□□□□ -2.34
CCDC7-208ENST00000537047 ZNF736B4DX44 427 aaPredicted RBP0.41□□□□□ -2.34
CCDC7-208ENST00000537047 ANP32AP39687 249 aaKnown RBP0.41□□□□□ -2.34
CCDC7-208ENST00000537047 AP3S2P59780 193 aa0.41□□□□□ -2.34
CCDC7-208ENST00000537047 BRMS1LQ5PSV4 323 aa0.41□□□□□ -2.34
CCDC7-208ENST00000537047 TEX261Q6UWH6 196 aa0.41□□□□□ -2.34
CCDC7-208ENST00000537047 SBSPONQ8IVN8 264 aa0.41□□□□□ -2.34
CCDC7-208ENST00000537047 Q8N6K4 173 aa0.41□□□□□ -2.34
CCDC7-208ENST00000537047 OR52R1Q8NGF1 315 aa0.41□□□□□ -2.34
CCDC7-208ENST00000537047 CT55Q8WUE5 264 aa0.41□□□□□ -2.34
CCDC7-208ENST00000537047 C6orf62Q9GZU0 229 aaPredicted RBP0.41□□□□□ -2.34
CCDC7-208ENST00000537047 CDC42SE1Q9NRR8 79 aa0.41□□□□□ -2.34
CCDC7-208ENST00000537047 U3KQ87 197 aa0.41□□□□□ -2.34
CCDC7-208ENST00000537047 V9GYY5 206 aaPredicted RBP0.41□□□□□ -2.34
CCDC7-208ENST00000537047 SYNE2Q8WXH0 6885 aaKnown RBP0.41□□□□□ -2.34
CCDC7-208ENST00000537047 A0A1W2PPM0 123 aa0.4□□□□□ -2.35
CCDC7-208ENST00000537047 CCDC160A6NGH7 325 aa0.4□□□□□ -2.35
CCDC7-208ENST00000537047 KPNA3O00505 521 aaPredicted RBP0.4□□□□□ -2.35
CCDC7-208ENST00000537047 ZNF25P17030 456 aaPredicted RBP0.4□□□□□ -2.35
CCDC7-208ENST00000537047 PPIBP23284 216 aaKnown RBP0.4□□□□□ -2.35
CCDC7-208ENST00000537047 CEBPGP53567 150 aa0.4□□□□□ -2.35
CCDC7-208ENST00000537047 DEFA1P59665 94 aa0.4□□□□□ -2.35
CCDC7-208ENST00000537047 TSNQ15631 228 aaKnown RBP0.4□□□□□ -2.35
CCDC7-208ENST00000537047 ESRGQ1W209 222 aa0.4□□□□□ -2.35
CCDC7-208ENST00000537047 KRTAP21-1Q3LI58 79 aa0.4□□□□□ -2.35
CCDC7-208ENST00000537047 TRAPPC5Q8IUR0 188 aa0.4□□□□□ -2.35
CCDC7-208ENST00000537047 GDPD1Q8N9F7 314 aa0.4□□□□□ -2.35
CCDC7-208ENST00000537047 ARL5BQ96KC2 179 aa0.4□□□□□ -2.35
CCDC7-208ENST00000537047 CCDC42Q96M95 316 aa0.4□□□□□ -2.35
CCDC7-208ENST00000537047 HIST1H2BLQ99880 126 aa0.4□□□□□ -2.35
CCDC7-208ENST00000537047 TMEM70Q9BUB7 260 aa0.4□□□□□ -2.35
CCDC7-208ENST00000537047 OR51V1Q9H2C8 321 aa0.4□□□□□ -2.35
CCDC7-208ENST00000537047 RNF122Q9H9V4 155 aa0.4□□□□□ -2.35
CCDC7-208ENST00000537047 C14orf132Q9NPU4 83 aa0.4□□□□□ -2.35
CCDC7-208ENST00000537047 NOSIPQ9Y314 301 aaKnown RBP0.4□□□□□ -2.35
CCDC7-208ENST00000537047 MYO3BQ8WXR4 1341 aa0.39□□□□□ -2.35
CCDC7-208ENST00000537047 CEP192Q8TEP8 1941 aa0.39□□□□□ -2.35
CCDC7-208ENST00000537047 TRAV3A0A0B4J244 114 aa0.39□□□□□ -2.35
CCDC7-208ENST00000537047 FAM236DA0A1B0GTK5 79 aa0.39□□□□□ -2.35
CCDC7-208ENST00000537047 hADV38S2A0JD32 116 aa0.39□□□□□ -2.35
CCDC7-208ENST00000537047 NCR3O14931 201 aa0.39□□□□□ -2.35
CCDC7-208ENST00000537047 NIPSNAP2O75323 286 aa0.39□□□□□ -2.35
CCDC7-208ENST00000537047 RPP14O95059 124 aaKnown RBP0.39□□□□□ -2.35
CCDC7-208ENST00000537047 CNIH1O95406 144 aa0.39□□□□□ -2.35
CCDC7-208ENST00000537047 FAM236CP0DP71 79 aa0.39□□□□□ -2.35
CCDC7-208ENST00000537047 EDDM3AQ14507 147 aa0.39□□□□□ -2.35
CCDC7-208ENST00000537047 DEFB113Q30KQ7 82 aa0.39□□□□□ -2.35
CCDC7-208ENST00000537047 C12orf74Q32Q52 190 aa0.39□□□□□ -2.35
CCDC7-208ENST00000537047 FAM74A1Q5RGS3 127 aa0.39□□□□□ -2.35
CCDC7-208ENST00000537047 LCA10Q71F78 164 aa0.39□□□□□ -2.35
CCDC7-208ENST00000537047 C12orf45Q8N5I9 185 aaPredicted RBP0.39□□□□□ -2.35
CCDC7-208ENST00000537047 LINC00301Q8NCQ3 95 aa0.39□□□□□ -2.35
CCDC7-208ENST00000537047 OR8D4Q8NGM9 314 aa0.39□□□□□ -2.35
CCDC7-208ENST00000537047 OR2T10Q8NGZ9 312 aa0.39□□□□□ -2.35
CCDC7-208ENST00000537047 TRIM4Q9C037 500 aa0.39□□□□□ -2.35
CCDC7-208ENST00000537047 UTP11Q9Y3A2 253 aaKnown RBP0.39□□□□□ -2.35
CCDC7-208ENST00000537047 ROBO3Q96MS0 1386 aa0.39□□□□□ -2.35
CCDC7-208ENST00000537047 TNRC6AQ8NDV7 1962 aaKnown RBP0.39□□□□□ -2.35
CCDC7-208ENST00000537047 ECM29Q5VYK3 1845 aa0.38□□□□□ -2.35
CCDC7-208ENST00000537047 EML5Q05BV3 1969 aa0.38□□□□□ -2.35
CCDC7-208ENST00000537047 SBF1O95248 1867 aa0.38□□□□□ -2.35
CCDC7-208ENST00000537047 MED1Q15648 1581 aaPredicted RBP0.38□□□□□ -2.35
CCDC7-208ENST00000537047 ADCY9O60503 1353 aa0.38□□□□□ -2.35
CCDC7-208ENST00000537047 hCG_1818297A0A087WSY0 165 aa0.38□□□□□ -2.35
CCDC7-208ENST00000537047 A0A087WUJ7 227 aa0.38□□□□□ -2.35
CCDC7-208ENST00000537047 A8MT66 165 aa0.38□□□□□ -2.35
CCDC7-208ENST00000537047 ZNF682O95780 498 aa0.38□□□□□ -2.35
CCDC7-208ENST00000537047 SERPINE1P05121 402 aa0.38□□□□□ -2.35
CCDC7-208ENST00000537047 C8GP07360 202 aa0.38□□□□□ -2.35
CCDC7-208ENST00000537047 RHOBP62745 196 aa0.38□□□□□ -2.35
CCDC7-208ENST00000537047 HIST1H3AP68431 136 aa0.38□□□□□ -2.35
CCDC7-208ENST00000537047 H3F3AP84243 136 aa0.38□□□□□ -2.35
CCDC7-208ENST00000537047 Q6Q795 121 aa0.38□□□□□ -2.35
CCDC7-208ENST00000537047 SPATA8Q6RVD6 105 aa0.38□□□□□ -2.35
CCDC7-208ENST00000537047 CLECL1Q8IZS7 167 aa0.38□□□□□ -2.35
CCDC7-208ENST00000537047 FAM172AQ8WUF8 416 aa0.38□□□□□ -2.35
CCDC7-208ENST00000537047 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.38□□□□□ -2.35
CCDC7-208ENST00000537047 TVP23BQ9NYZ1 205 aa0.38□□□□□ -2.35
CCDC7-208ENST00000537047 DENND4CQ5VZ89 1909 aa0.38□□□□□ -2.35
CCDC7-208ENST00000537047 TAF1LQ8IZX4 1826 aa0.38□□□□□ -2.35
CCDC7-208ENST00000537047 HECW2Q9P2P5 1572 aa0.37□□□□□ -2.35
CCDC7-208ENST00000537047 RTL1A6NKG5 1358 aa0.37□□□□□ -2.35
CCDC7-208ENST00000537047 CCL25O15444 150 aa0.37□□□□□ -2.35
CCDC7-208ENST00000537047 CCL16O15467 120 aa0.37□□□□□ -2.35
CCDC7-208ENST00000537047 PDE6DO43924 150 aa0.37□□□□□ -2.35
CCDC7-208ENST00000537047 DHFRP00374 187 aa0.37□□□□□ -2.35
CCDC7-208ENST00000537047 PSG9Q00887 426 aa0.37□□□□□ -2.35
CCDC7-208ENST00000537047 SRSF6Q13247 344 aaKnown RBP0.37□□□□□ -2.35
CCDC7-208ENST00000537047 GKN2Q86XP6 184 aa0.37□□□□□ -2.35
CCDC7-208ENST00000537047 TMEM254Q8TBM7 123 aa0.37□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms