RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, human

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSB-222	ENST00000531551	NUPL2	O15504	423 aa	Known RBP	13.61	□□□□□ -0.23
CTSB-222	ENST00000531551	OR10J1	P30954	320 aa		13.61	□□□□□ -0.23
CTSB-222	ENST00000531551	CHRDL1	Q9BU40	450 aa		13.61	□□□□□ -0.23
CTSB-222	ENST00000531551	ADARB2-AS1	A8MUL3	147 aa		13.61	□□□□□ -0.23
CTSB-222	ENST00000531551	SCGB2A1	O75556	95 aa		13.61	□□□□□ -0.23
CTSB-222	ENST00000531551	HSPB1	P04792	205 aa	Known RBP	13.61	□□□□□ -0.23
CTSB-222	ENST00000531551	CXCL2	P19875	107 aa		13.61	□□□□□ -0.23
CTSB-222	ENST00000531551	FCGR2B	P31994	310 aa	Predicted RBP	13.61	□□□□□ -0.23
CTSB-222	ENST00000531551	OR2F1	Q13607	317 aa		13.61	□□□□□ -0.23
CTSB-222	ENST00000531551	TIGIT	Q495A1	244 aa		13.61	□□□□□ -0.23
CTSB-222	ENST00000531551	TREML4	Q6UXN2	200 aa		13.61	□□□□□ -0.23
CTSB-222	ENST00000531551	OR1N2	Q8NGR9	330 aa		13.61	□□□□□ -0.23
CTSB-222	ENST00000531551	ATP5S	Q99766	215 aa		13.61	□□□□□ -0.23
CTSB-222	ENST00000531551	TENM1	Q9UKZ4	2725 aa		13.6	□□□□□ -0.23
CTSB-222	ENST00000531551	DFFB	O76075	338 aa		13.6	□□□□□ -0.23
CTSB-222	ENST00000531551	OR2C1	O95371	312 aa		13.6	□□□□□ -0.23
CTSB-222	ENST00000531551	CTSG	P08311	255 aa		13.6	□□□□□ -0.23
CTSB-222	ENST00000531551	NKX2-5	P52952	324 aa	Predicted RBP	13.6	□□□□□ -0.23
CTSB-222	ENST00000531551	FAM209B	Q5JX69	171 aa		13.6	□□□□□ -0.23
CTSB-222	ENST00000531551	SHISA2	Q6UWI4	295 aa		13.6	□□□□□ -0.23
CTSB-222	ENST00000531551	TMEM144	Q7Z5S9	345 aa		13.6	□□□□□ -0.23
CTSB-222	ENST00000531551	WFDC1	Q9HC57	220 aa		13.6	□□□□□ -0.23
CTSB-222	ENST00000531551	IGKV1OR2-108	A0A075B7D4	117 aa		13.59	□□□□□ -0.23
CTSB-222	ENST00000531551	TRAV30	A0A087WSZ9	112 aa		13.59	□□□□□ -0.23
CTSB-222	ENST00000531551	FNDC10	F2Z333	226 aa		13.59	□□□□□ -0.23
CTSB-222	ENST00000531551	LINC01619	G3V211	115 aa		13.59	□□□□□ -0.23
CTSB-222	ENST00000531551	BMPR1B	O00238	502 aa		13.59	□□□□□ -0.23
CTSB-222	ENST00000531551	IGLC1	P0CG04	106 aa		13.59	□□□□□ -0.23
CTSB-222	ENST00000531551	RUNX1	Q01196	453 aa		13.59	□□□□□ -0.23
CTSB-222	ENST00000531551	TEPP	Q6URK8	271 aa		13.59	□□□□□ -0.23
CTSB-222	ENST00000531551	ARL6	Q9H0F7	186 aa		13.59	□□□□□ -0.23
CTSB-222	ENST00000531551	GGCT	O75223	188 aa	Known RBP	13.59	□□□□□ -0.23
CTSB-222	ENST00000531551	IFNA5	P01569	189 aa		13.59	□□□□□ -0.23
CTSB-222	ENST00000531551	FGF7	P21781	194 aa		13.59	□□□□□ -0.23
CTSB-222	ENST00000531551	ADM	P35318	185 aa		13.59	□□□□□ -0.23
CTSB-222	ENST00000531551	ZNF90	Q03938	601 aa		13.59	□□□□□ -0.23
CTSB-222	ENST00000531551	ZNF345	Q14585	488 aa		13.59	□□□□□ -0.23
CTSB-222	ENST00000531551	RPEL1	Q2QD12	228 aa		13.59	□□□□□ -0.23
CTSB-222	ENST00000531551	VWC2	Q2TAL6	325 aa		13.59	□□□□□ -0.23
CTSB-222	ENST00000531551	SPSB3	Q6PJ21	355 aa		13.59	□□□□□ -0.23
CTSB-222	ENST00000531551	KCNRG	Q8N5I3	272 aa		13.59	□□□□□ -0.23
CTSB-222	ENST00000531551	RAX2	Q96IS3	184 aa		13.59	□□□□□ -0.23
CTSB-222	ENST00000531551	ATP6V0B	Q99437	205 aa		13.59	□□□□□ -0.23
CTSB-222	ENST00000531551	COL6A5	A8TX70	2615 aa		13.58	□□□□□ -0.24
CTSB-222	ENST00000531551		A0A0D9SG52	128 aa		13.58	□□□□□ -0.24
CTSB-222	ENST00000531551	CCL24	O00175	119 aa		13.58	□□□□□ -0.24
CTSB-222	ENST00000531551	YIF1A	O95070	293 aa		13.58	□□□□□ -0.24
CTSB-222	ENST00000531551	ZNF616	Q08AN1	781 aa		13.58	□□□□□ -0.24
CTSB-222	ENST00000531551	LGALSL	Q3ZCW2	172 aa	Predicted RBP	13.58	□□□□□ -0.24
CTSB-222	ENST00000531551	BTNL8	Q6UX41	500 aa		13.58	□□□□□ -0.24
CTSB-222	ENST00000531551	IGKV1D-37	A0A075B6S9	117 aa		13.57	□□□□□ -0.24
CTSB-222	ENST00000531551	BOLA2-SMG1P6	H3BVE0	249 aa		13.57	□□□□□ -0.24
CTSB-222	ENST00000531551	IGKV1-17	P01599	117 aa		13.57	□□□□□ -0.24
CTSB-222	ENST00000531551	SLURP1	P55000	103 aa		13.57	□□□□□ -0.24
CTSB-222	ENST00000531551	TMUB2	Q71RG4	321 aa		13.57	□□□□□ -0.24
CTSB-222	ENST00000531551	THAP8	Q8NA92	274 aa		13.57	□□□□□ -0.24
CTSB-222	ENST00000531551	SCGB1C1	Q8TD33	95 aa		13.57	□□□□□ -0.24
CTSB-222	ENST00000531551	WDR83OS	Q9Y284	106 aa		13.57	□□□□□ -0.24
CTSB-222	ENST00000531551	KANTR	A0A1W2PQU2	76 aa		13.57	□□□□□ -0.24
CTSB-222	ENST00000531551	HOXD3	P31249	432 aa	Predicted RBP	13.57	□□□□□ -0.24
CTSB-222	ENST00000531551	REL	Q04864	619 aa	Predicted RBP	13.57	□□□□□ -0.24
CTSB-222	ENST00000531551	ZNF266	Q14584	549 aa		13.57	□□□□□ -0.24
CTSB-222	ENST00000531551	ARPC5L	Q9BPX5	153 aa		13.57	□□□□□ -0.24
CTSB-222	ENST00000531551	IGHV3OR16-8	A0A075B7F1	116 aa		13.56	□□□□□ -0.24
CTSB-222	ENST00000531551	ZNF320	A2RRD8	509 aa		13.56	□□□□□ -0.24
CTSB-222	ENST00000531551	PF4	P02776	101 aa		13.56	□□□□□ -0.24
CTSB-222	ENST00000531551	HNRNPC	P07910	306 aa	Known RBP eCLIP	13.56	□□□□□ -0.24	1e-6	■■□□□ 13.5
CTSB-222	ENST00000531551	GATA2	P23769	480 aa	Predicted RBP	13.56	□□□□□ -0.24
CTSB-222	ENST00000531551	CAMLG	P49069	296 aa		13.56	□□□□□ -0.24
CTSB-222	ENST00000531551	RAB31	Q13636	194 aa		13.56	□□□□□ -0.24
CTSB-222	ENST00000531551	RPL7L1	Q6DKI1	246 aa	Known RBP	13.56	□□□□□ -0.24
CTSB-222	ENST00000531551	OR4F17	Q8NGA8	305 aa		13.56	□□□□□ -0.24
CTSB-222	ENST00000531551	OR4F4	Q96R69	305 aa		13.56	□□□□□ -0.24
CTSB-222	ENST00000531551	TRGV9	Q99603	122 aa		13.56	□□□□□ -0.24
CTSB-222	ENST00000531551	MGST2	Q99735	147 aa		13.56	□□□□□ -0.24
CTSB-222	ENST00000531551	WDR61	Q9GZS3	305 aa	Known RBP	13.56	□□□□□ -0.24
CTSB-222	ENST00000531551	LSM4	Q9Y4Z0	139 aa	Known RBP	13.56	□□□□□ -0.24
CTSB-222	ENST00000531551	TAAR5	O14804	337 aa		13.55	□□□□□ -0.24
CTSB-222	ENST00000531551	AGPAT2	O15120	278 aa		13.55	□□□□□ -0.24
CTSB-222	ENST00000531551	RD3L	P0DJH9	198 aa		13.55	□□□□□ -0.24
CTSB-222	ENST00000531551	ZP3	P21754	424 aa		13.55	□□□□□ -0.24
CTSB-222	ENST00000531551	CYP2G1P	Q6ZSU1	146 aa		13.55	□□□□□ -0.24
CTSB-222	ENST00000531551	C9orf62	Q8N4C0	152 aa		13.55	□□□□□ -0.24
CTSB-222	ENST00000531551		Q8WTZ3	238 aa		13.55	□□□□□ -0.24
CTSB-222	ENST00000531551	PUS1	Q9Y606	427 aa	Known RBP eCLIP	13.55	□□□□□ -0.24
CTSB-222	ENST00000531551	BORCS7-ASMT	A0A0B4J1R7	106 aa		13.55	□□□□□ -0.24
CTSB-222	ENST00000531551	PSG1	P11464	419 aa		13.55	□□□□□ -0.24
CTSB-222	ENST00000531551	ZNF600	Q6ZNG1	722 aa		13.55	□□□□□ -0.24
CTSB-222	ENST00000531551	TMEM182	Q6ZP80	229 aa	Predicted RBP	13.55	□□□□□ -0.24
CTSB-222	ENST00000531551	C20orf24	Q9BUV8	137 aa		13.55	□□□□□ -0.24
CTSB-222	ENST00000531551	BCL2L11	O43521	198 aa		13.54	□□□□□ -0.24
CTSB-222	ENST00000531551	FABP1	P07148	127 aa		13.54	□□□□□ -0.24
CTSB-222	ENST00000531551	MYCNOS	P40205	109 aa		13.54	□□□□□ -0.24
CTSB-222	ENST00000531551	SYNJ2BP	P57105	145 aa		13.54	□□□□□ -0.24
CTSB-222	ENST00000531551	YPEL3	P61236	119 aa	Predicted RBP	13.54	□□□□□ -0.24
CTSB-222	ENST00000531551	FAM106A	Q4KMX7	169 aa		13.54	□□□□□ -0.24
CTSB-222	ENST00000531551	HSD17B11	Q8NBQ5	300 aa		13.54	□□□□□ -0.24
CTSB-222	ENST00000531551	ZNF471	Q9BX82	626 aa	Predicted RBP	13.54	□□□□□ -0.24
CTSB-222	ENST00000531551	NPCDR1	Q9BY65	106 aa		13.54	□□□□□ -0.24
CTSB-222	ENST00000531551	TOMM40	O96008	361 aa		13.53	□□□□□ -0.24

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