RNA–Protein interactions for RNA: ENST00000528877.5

ITGB1-218, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-218ENST00000528877 C6orf62Q9GZU0 229 aaPredicted RBP5.25□□□□□ -1.57
ITGB1-218ENST00000528877 RBM38Q9H0Z9 239 aaKnown RBP5.25□□□□□ -1.57
ITGB1-218ENST00000528877 PLECQ15149 4684 aaKnown RBP5.25□□□□□ -1.57
ITGB1-218ENST00000528877 IGHV3-21A0A0B4J1V1 117 aa5.24□□□□□ -1.57
ITGB1-218ENST00000528877 TRAV2A0A0B4J234 112 aa5.24□□□□□ -1.57
ITGB1-218ENST00000528877 KIR2DL5BA0A0G2JN68 375 aa5.24□□□□□ -1.57
ITGB1-218ENST00000528877 KIR2DL5BA0A0G2JPC4 375 aa5.24□□□□□ -1.57
ITGB1-218ENST00000528877 IGHV7-4-1A0A0J9YVY3 117 aa5.24□□□□□ -1.57
ITGB1-218ENST00000528877 TEX13DA0A0J9YY54 714 aaPredicted RBP5.24□□□□□ -1.57
ITGB1-218ENST00000528877 OR4C46A6NHA9 309 aa5.24□□□□□ -1.57
ITGB1-218ENST00000528877 GNG7O60262 68 aa5.24□□□□□ -1.57
ITGB1-218ENST00000528877 IFNA17P01571 189 aa5.24□□□□□ -1.57
ITGB1-218ENST00000528877 TNFSF8P32971 234 aa5.24□□□□□ -1.57
ITGB1-218ENST00000528877 SNCAP37840 140 aa5.24□□□□□ -1.57
ITGB1-218ENST00000528877 HTR2BP41595 481 aa5.24□□□□□ -1.57
ITGB1-218ENST00000528877 NPBWR1P48145 328 aa5.24□□□□□ -1.57
ITGB1-218ENST00000528877 HOXA1P49639 335 aaPredicted RBP5.24□□□□□ -1.57
ITGB1-218ENST00000528877 SUB1P53999 127 aaKnown RBP eCLIP5.24□□□□□ -1.57
ITGB1-218ENST00000528877 SP6Q3SY56 376 aa5.24□□□□□ -1.57
ITGB1-218ENST00000528877 NMSQ5H8A3 153 aa5.24□□□□□ -1.57
ITGB1-218ENST00000528877 LAMTOR1Q6IAA8 161 aa5.24□□□□□ -1.57
ITGB1-218ENST00000528877 KIR2DL5AQ8N109 375 aa5.24□□□□□ -1.57
ITGB1-218ENST00000528877 UBAC2Q8NBM4 344 aa5.24□□□□□ -1.57
ITGB1-218ENST00000528877 OR51S1Q8NGJ8 323 aa5.24□□□□□ -1.57
ITGB1-218ENST00000528877 KIR2DL5BQ8NHK3 375 aa5.24□□□□□ -1.57
ITGB1-218ENST00000528877 TMEM230Q96A57 120 aa5.24□□□□□ -1.57
ITGB1-218ENST00000528877 GINS3Q9BRX5 216 aa5.24□□□□□ -1.57
ITGB1-218ENST00000528877 VSIRQ9H7M9 311 aa5.24□□□□□ -1.57
ITGB1-218ENST00000528877 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.24□□□□□ -1.57
ITGB1-218ENST00000528877 SMPXQ9UHP9 88 aa5.24□□□□□ -1.57
ITGB1-218ENST00000528877 SCP2D1Q9UJQ7 156 aa5.24□□□□□ -1.57
ITGB1-218ENST00000528877 TP53TG1Q9Y2A0 90 aa5.24□□□□□ -1.57
ITGB1-218ENST00000528877 V9GYH0 126 aa5.24□□□□□ -1.57
ITGB1-218ENST00000528877 LOC102724200A0A096LPH7 203 aaPredicted RBP5.23□□□□□ -1.57
ITGB1-218ENST00000528877 PIGBOS1A0A0B4J2F0 54 aa5.23□□□□□ -1.57
ITGB1-218ENST00000528877 CHEK1O14757 476 aa5.23□□□□□ -1.57
ITGB1-218ENST00000528877 SCGB2A1O75556 95 aa5.23□□□□□ -1.57
ITGB1-218ENST00000528877 BMI1P35226 326 aa5.23□□□□□ -1.57
ITGB1-218ENST00000528877 AP3S2P59780 193 aa5.23□□□□□ -1.57
ITGB1-218ENST00000528877 SUPT4H1P63272 117 aaKnown RBP5.23□□□□□ -1.57
ITGB1-218ENST00000528877 SRPXP78539 464 aa5.23□□□□□ -1.57
ITGB1-218ENST00000528877 NHLH2Q02577 135 aa5.23□□□□□ -1.57
ITGB1-218ENST00000528877 KLF9Q13886 244 aaPredicted RBP5.23□□□□□ -1.57
ITGB1-218ENST00000528877 TMEM187Q14656 261 aa5.23□□□□□ -1.57
ITGB1-218ENST00000528877 C2orf83Q53S99 150 aa5.23□□□□□ -1.57
ITGB1-218ENST00000528877 SPINK9Q5DT21 86 aa5.23□□□□□ -1.57
ITGB1-218ENST00000528877 FAM90A2PQ658T7 463 aa5.23□□□□□ -1.57
ITGB1-218ENST00000528877 ZNF600Q6ZNG1 722 aa5.23□□□□□ -1.57
ITGB1-218ENST00000528877 Q6ZWC4 215 aa5.23□□□□□ -1.57
ITGB1-218ENST00000528877 SELENOHQ8IZQ5 122 aaKnown RBP5.23□□□□□ -1.57
ITGB1-218ENST00000528877 TMEM116Q8NCL8 245 aa5.23□□□□□ -1.57
ITGB1-218ENST00000528877 DUSP18Q8NEJ0 188 aa5.23□□□□□ -1.57
ITGB1-218ENST00000528877 OR4X1Q8NH49 305 aa5.23□□□□□ -1.57
ITGB1-218ENST00000528877 MCFD2Q8NI22 146 aa5.23□□□□□ -1.57
ITGB1-218ENST00000528877 RNASEH2CQ8TDP1 164 aaKnown RBP5.23□□□□□ -1.57
ITGB1-218ENST00000528877 SCGB3A2Q96PL1 93 aa5.23□□□□□ -1.57
ITGB1-218ENST00000528877 C20orf24Q9BUV8 137 aa5.23□□□□□ -1.57
ITGB1-218ENST00000528877 RHPN1-AS1Q9BWJ2 59 aa5.23□□□□□ -1.57
ITGB1-218ENST00000528877 FNDC4Q9H6D8 234 aaPredicted RBP5.23□□□□□ -1.57
ITGB1-218ENST00000528877 RETNQ9HD89 108 aa5.23□□□□□ -1.57
ITGB1-218ENST00000528877 C11orf21Q9P2W6 132 aa5.23□□□□□ -1.57
ITGB1-218ENST00000528877 TRAV14DV4A0A0A6YYC5 116 aa5.22□□□□□ -1.57
ITGB1-218ENST00000528877 A0A0B4J2A0 478 aa5.22□□□□□ -1.57
ITGB1-218ENST00000528877 LCE6AA0A183 80 aa5.22□□□□□ -1.57
ITGB1-218ENST00000528877 A0A1B0GU03 582 aa5.22□□□□□ -1.57
ITGB1-218ENST00000528877 DUXBA0A1W2PPF3 345 aa5.22□□□□□ -1.57
ITGB1-218ENST00000528877 RPS10-NUDT3A0A1W2PQS6 291 aa5.22□□□□□ -1.57
ITGB1-218ENST00000528877 FABP12A6NFH5 140 aa5.22□□□□□ -1.57
ITGB1-218ENST00000528877 UBE2CO00762 179 aa5.22□□□□□ -1.57
ITGB1-218ENST00000528877 CLN5O75503 358 aa5.22□□□□□ -1.57
ITGB1-218ENST00000528877 IGKV1-17P01599 117 aa5.22□□□□□ -1.57
ITGB1-218ENST00000528877 SLC25A4P12235 298 aa5.22□□□□□ -1.57
ITGB1-218ENST00000528877 FAUP35544 74 aaKnown RBP5.22□□□□□ -1.57
ITGB1-218ENST00000528877 ETV6P41212 452 aa5.22□□□□□ -1.57
ITGB1-218ENST00000528877 APOC4P55056 127 aa5.22□□□□□ -1.57
ITGB1-218ENST00000528877 TNFRSF9Q07011 255 aa5.22□□□□□ -1.57
ITGB1-218ENST00000528877 ZNF79Q15937 498 aa5.22□□□□□ -1.57
ITGB1-218ENST00000528877 TMEM268Q5VZI3 342 aa5.22□□□□□ -1.57
ITGB1-218ENST00000528877 TOMM20LQ6UXN7 152 aa5.22□□□□□ -1.57
ITGB1-218ENST00000528877 CCDC190Q86UF4 302 aa5.22□□□□□ -1.57
ITGB1-218ENST00000528877 SLC24A4Q8NFF2 622 aa5.22□□□□□ -1.57
ITGB1-218ENST00000528877 RNASE11Q8TAA1 199 aaKnown RBP5.22□□□□□ -1.57
ITGB1-218ENST00000528877 TMEM170AQ8WVE7 144 aa5.22□□□□□ -1.57
ITGB1-218ENST00000528877 PINX1Q96BK5 328 aaKnown RBP5.22□□□□□ -1.57
ITGB1-218ENST00000528877 RNF2Q99496 336 aa5.22□□□□□ -1.57
ITGB1-218ENST00000528877 OVOL2Q9BRP0 275 aa5.22□□□□□ -1.57
ITGB1-218ENST00000528877 ENY2Q9NPA8 101 aa5.22□□□□□ -1.57
ITGB1-218ENST00000528877 FAM30AQ9NZY2 134 aa5.22□□□□□ -1.57
ITGB1-218ENST00000528877 HSPB7Q9UBY9 170 aa5.22□□□□□ -1.57
ITGB1-218ENST00000528877 CACNG5Q9UF02 275 aa5.22□□□□□ -1.57
ITGB1-218ENST00000528877 SHPKQ9UHJ6 478 aa5.22□□□□□ -1.57
ITGB1-218ENST00000528877 PUS1Q9Y606 427 aaKnown RBP eCLIP5.22□□□□□ -1.57
ITGB1-218ENST00000528877 IGHV3OR16-8A0A075B7F1 116 aa5.21□□□□□ -1.58
ITGB1-218ENST00000528877 TRAV30A0A087WSZ9 112 aa5.21□□□□□ -1.58
ITGB1-218ENST00000528877 ZNF207O43670 478 aaKnown RBP5.21□□□□□ -1.58
ITGB1-218ENST00000528877 TMEM50AO95807 157 aa5.21□□□□□ -1.58
ITGB1-218ENST00000528877 IGHV3-48P01763 117 aa5.21□□□□□ -1.58
ITGB1-218ENST00000528877 IGLC1P0CG04 106 aa5.21□□□□□ -1.58
ITGB1-218ENST00000528877 SULT1A3P0DMM9 295 aa5.21□□□□□ -1.58
ITGB1-218ENST00000528877 SULT1A4P0DMN0 295 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms